prot_H-paniculata_contig7764.15799.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7764.15799.1
Unique Nameprot_H-paniculata_contig7764.15799.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length176
Homology
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 6.100e-71
Identity = 106/168 (63.10%), Postives = 127/168 (75.60%), Query Frame = 0
Query:    5 PWLWISALWGLYVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQ---SDRKGPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            PW+W+SA+WG+Y AWL + PLV KAVT+GVL   GD  AQ FEFQQ   S R+GP +K+TRRL AV ID   IT PALHALYG+LE  IPT  G   PA  H+++DT VFDPMFVASFFCVTGMLE+R+L   +LP+LRREFWP ++G+W V  LF PL + TFRYLP
Sbjct:  178 PWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLP 345          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 6.900e-71
Identity = 106/168 (63.10%), Postives = 126/168 (75.00%), Query Frame = 0
Query:    5 PWLWISALWGLYVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQ---SDRKGPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            PW+W+SA+WG+Y AWL + PLV KAVT+GVL   GD  AQ FEFQQ   S R+GP +K+ RRL AV ID   IT PALHALYG+LE  IPT GG   PA  H+++DT VFDPMFVASFFCVTGMLE+R L   +LP+LRREFWP ++G+W V  LF PL + TFRYLP
Sbjct:  178 PWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNRRLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLP 345          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: W7TTT3_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.050e-38
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 0
Query:   10 SALWGLYVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQSDRK-------GPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
             +LWG Y   L   P++TKA+TAG++A  GD +AQ FE++ + R+        P   +  R LAV I+G  IT P LH LY  LE W+P   G +  A  H+ VD  +FDP+FV  FF + G++E + L  D+ P ++RE+W  ++G W V  +F PL + TFR LP
Sbjct:  153 KSLWGQYAELLESKPVLTKAITAGLIALFGDLLAQVFEYKLTCRRLAKGEEPAPFHLNFLRCLAVTIEGVVITGPGLHYLYTALESWMPAQRGFL-AAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKHLSRDIFPQVQREYWSALKGGWGVSIMFLPLEFATFRCLP 318          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A836CK90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK90_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.100e-34
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   68 VIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            +IDG  IT P LH LYG+LE  IPTT G   PA  H+L+DT +FDP+FV SFF  T + E R+L  DV P L RE+WP +RG+W V  LF P+ +  FRYLP
Sbjct:    1 MIDGVCITGPGLHFLYGLLESHIPTTAGGALPAAAHVLLDTFLFDPVFVCSFFFTTALFEGRSLRRDVAPRLAREYWPALRGSWGVSVLFWPVQWAAFRYLP 102          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.130e-30
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 0
Query:   75 TAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            T P LH LYG+LE  IPTT G + PA  H+L+DT +FDP+FV +FF  T + E +++  +V+P L RE+WP + G+W V  LF PL +  FRYLP
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLP 95          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A7S2M641_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M641_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.780e-23
Identity = 58/181 (32.04%), Postives = 95/181 (52.49%), Query Frame = 0
Query:   10 SALWGLYVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQ--QSDRKGPRVKDTRRLLAVVIDGAF--------------ITAPALHALYGMLEYWIPTTGG-----EMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            SA +  Y++ L   PL+TK VT G++AF+GD  AQ FE++  Q+ ++      T++   + I G +              I++P +H  Y + E  +PT GG         AL H+L D ++ D +FV +    TG+LE       V+P+LRR + PT++ +     L  PL +++FR+LP
Sbjct:   72 SAFFAWYLSALDATPLLTKCVTGGLIAFVGDYGAQFFEWKSKQAPKESYNGSTTKQRSTISIHGTYNIRRGIARFLECLLISSPLMHYGYDLFETVVPTVGGGSALYRSIAALTHVLADCVLLDAIFVMTGIVFTGLLEGHRFRQQVIPNLRRVYLPTLKASVMTCGLLAPLQFLSFRFLP 252          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: PXMP2_RAT (Peroxisomal membrane protein 2 n=14 Tax=Tetrapoda TaxID=32523 RepID=PXMP2_RAT)

HSP 1 Score: 95.9 bits (237), Expect = 1.510e-21
Identity = 52/154 (33.77%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   16 YVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQSDRKGPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            Y+ +L  +P+VTKAV++G+L+ +G+ +AQ  E +Q  +K  R  +   LL  ++ G F+T P  H LY  +EYW+P      +  +  LL+D L F P F+  FF V  +LE + + S  +  +R  FWP ++  W    ++ PL ++   Y+P
Sbjct:   25 YLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQ--KKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYWVPPE--VPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNI-SVFVAKMRSGFWPALQMNWR---MWTPLQFININYVP 170          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A8C5F4E5_GADMO (Uncharacterized protein n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5F4E5_GADMO)

HSP 1 Score: 94.7 bits (234), Expect = 7.860e-21
Identity = 49/156 (31.41%), Postives = 88/156 (56.41%), Query Frame = 0
Query:   16 YVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQSDRKGPRVKDTRRLLAV--VIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            Y+  L  +P++TK+VT+G+L+ +G+ ++Q  E  +S + G  VK+  R  A    I G F+T P  H  Y ++E W+PTT  + +  +  LL+D L+F P+F+  F+ V   LE++ L +D+   L   +W  ++  W V   + P  ++   ++P
Sbjct:   21 YLFLLKTYPILTKSVTSGILSSLGNLLSQFLEANKSAKNGKPVKEINRAAATRYAIFGLFLTGPLSHYFYQLMEVWMPTT--DPYYIVKRLLLDRLIFAPVFLFIFYLVMNTLESKGL-ADLQNKLEDTYWTALKMNWRV---WTPFQFININFVP 170          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A6J2WMW5_CHACN (peroxisomal membrane protein 2 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WMW5_CHACN)

HSP 1 Score: 90.5 bits (223), Expect = 1.800e-19
Identity = 48/156 (30.77%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   16 YVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQSDRKGPRVKDTRRL--LAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            Y+  L K+P++TKAVT+G+L+ +G+ ++QA E ++  ++G   KD   +      + G  +T P  H  Y +LE  +P T    +  +  LL+D LVF P F+  FF V  +LE + L +D    +++ +WP ++  W V   + P  ++   ++P
Sbjct:   21 YLLLLKKYPILTKAVTSGILSALGNLLSQALESRKKAKQGSPAKDVDFIGPARFAVYGLLVTGPVSHYFYQVLEVLLPAT--VPYCMVKRLLLDRLVFAPAFLLLFFSVMNVLEGKTL-ADFENKVKKGYWPALKMNWKV---WTPFQFININFIP 170          
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Match: A0A7S1BNK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNK7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.420e-19
Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 0
Query:   16 YVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQ----QSDRKGPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGG----EMFPALCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGAWAVDALFGPLNYVTFRYLP 169
            Y++ L + P+VTKA++AG++A +GD +AQ  E      +  R        RR L V ++   +  P +H ++G  +  +P  G          + H+L DT   D  F+A  F  + + E   L   V+P +R++++ T++  W +     PL    FRYLP
Sbjct:   37 YLSLLVERPVVTKALSAGLVAILGDFLAQNVEGSIPGTEEQRTSSFATRHRRTLVVFLEAVLVVGPTMHIMFGAFDSVLPIVGTTGLTRTLSVMAHVLADTFFLDAFFIAIMFFSSSVAEGEDL-RTVVPRMRQDYFDTLKATWILSGAMAPLEMCIFRYLP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7764.15799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK43_9PHAE6.100e-7163.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRI6_ECTSI6.900e-7163.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TTT3_9STRA2.050e-3841.32Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A836CK90_9STRA2.100e-3454.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPL7_9STRA5.130e-3050.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2M641_9STRA3.780e-2332.04Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
PXMP2_RAT1.510e-2133.77Peroxisomal membrane protein 2 n=14 Tax=Tetrapoda ... [more]
A0A8C5F4E5_GADMO7.860e-2131.41Uncharacterized protein n=2 Tax=Gadus morhua TaxID... [more]
A0A6J2WMW5_CHACN1.800e-1930.77peroxisomal membrane protein 2 n=1 Tax=Chanos chan... [more]
A0A7S1BNK7_9STRA4.420e-1929.01Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 11..170
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 11..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..175
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7764contigH-paniculata_contig7764:3436..9621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7764.15799.1mRNA_H-paniculata_contig7764.15799.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7764 3375..9740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7764.15799.1 ID=prot_H-paniculata_contig7764.15799.1|Name=mRNA_H-paniculata_contig7764.15799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MRPVPWLWISALWGLYVAWLGKFPLVTKAVTAGVLAFIGDAIAQAFEFQQ
SDRKGPRVKDTRRLLAVVIDGAFITAPALHALYGMLEYWIPTTGGEMFPA
LCHLLVDTLVFDPMFVASFFCVTGMLENRALFSDVLPSLRREFWPTMRGA
WAVDALFGPLNYVTFRYLPPVGEHM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22