prot_H-paniculata_contig77559.15786.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig77559.15786.1
Unique Nameprot_H-paniculata_contig77559.15786.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length183
Homology
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 6.160e-35
Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 0
Query:    1 LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD-LYFFSLEITSSSGAP------------GLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLV-TDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D     +  IT   GA             GLA++  +T  LWHRRMGH+N  SL++L+    +G+D+ G V D   C +GKS Q  HPK A   V   FQLV  D + P  P AL GFKYA K  D++T+W E+ L+K K  ++ A + F
Sbjct:  490 MLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELF 684          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.100e-34
Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 0
Query:    1 LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD-LYFFSLEITSSSGAP------------GLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLV-TDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D     +  IT   GA             GLA++  +T  LWHRRMGH+N  SL++L+    +G+D+ G V D   C +GKS Q  HPK A   V   FQLV  D + P  P AL GFKYA K  D++T+W E+ L+K K  ++ A + F
Sbjct:  490 VLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELF 684          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 5.350e-34
Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    2 VVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD-LYFFSLEITSSSGAPGLAMQA-----------ADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLV-TDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            +VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D     +  IT   GA     Q             +T  LWHRRMGH+N  SL++L+    +G+D+ G V D   C +GKS Q  HPK A   V   FQLV  D + P  P AL GFKYA K  D++T+W E+ L+K K  ++ A + F
Sbjct:  613 LVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRVETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELF 806          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.350e-31
Identity = 79/186 (42.47%), Postives = 104/186 (55.91%), Query Frame = 0
Query:    1 LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD-LYFFSLEITSSSGAP------------GLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLV-TDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTK 172
            ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D     +  IT   GA             GLA++  +T  LWHRRMGH+N  SL++L+    +G+D+ G V D   C +GKS Q  HPK A   V   FQLV  D   P     L GFKYA K  D++T+W E+ L+K K
Sbjct:  395 VLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDK 579          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.810e-31
Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   39 VPLQELESDLYFFSLEITSSSGAPGLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVTDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            VPL+ L +D    S+       +P +AM+A ++  LWHRR+GH++  SL++L+ +DDNGVD+ G +   D+CA+GKS Q  HPK A   V R FQ+ TDLM PI P A  GF+Y  K     T+W EI+L+KTK  A+   Q F
Sbjct:    6 VPLRRLGNDTVLCSVS-RELDNSPNMAMRA-ESADLWHRRLGHIDSRSLDVLRKIDDNGVDYTGPMETCDVCAIGKSSQRPHPKKATYDVSRHFQVSTDLMGPISPPARRGFRYVSKFVHGNTKWKEIFLIKTKRDAIKILQLF 147          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 8.220e-31
Identity = 75/190 (39.47%), Postives = 103/190 (54.21%), Query Frame = 0
Query:    7 GRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD------LYFFSLEITSSSGAPGLAMQAADTVTL-------WHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVT-DLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            G NLFSV  A   GV ++F  +NPRLE+ +   P+Q L  D      +Y   +++    G P +   A D + L       WHRRMGH+N  SL++L+    NGVD+ G V D  +C +GKS Q  HPK     V R FQ V+ D + P  P AL GFKYA K  D+ T+W EI L+K +  ++ +   F
Sbjct:  208 GTNLFSVTLAMLKGVETLFHPDNPRLESGDVVFPMQTLGVDATTGKRIYSIEVKLGGEPGGPTVLGDAPDALALKVESADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLRPFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLMKDQACSVDSLALF 397          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.170e-27
Identity = 57/137 (41.61%), Postives = 83/137 (60.58%), Query Frame = 0
Query:   47 DLYFFSLEITSSSGAPGLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVT-DLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            +LY F++++  +    G+A+    +  LWHRR+GH++  SL++L+ V  NGV++ G +   D+CAVG S Q  HPK A     R FQLVT DLM P  P AL GF Y  K  D++ +W E++L+K K   + A Q F
Sbjct:  242 ELYHFTMDLPETGEISGVALPVK-SAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLF 377          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.720e-25
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    1 LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSSSGAPGLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVT-DLMRPIMPEALEGFKYACKISDE 159
            ++VPGLG  LFSV  A   GV ++   +N RLE+ +   P+Q L        ++ T+      + +++AD   LWHRRMGH+N  SL++L+    NGVD+ G V D  +C +GKS Q  HPK A   V R FQ V+ D + P  P AL GFK A K  D+
Sbjct:  580 VLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTL-------GVDATTGKRIYSIEVESAD---LWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVDTLGPFTPTALSGFKVATKFVDQ 729          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.250e-24
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   59 SGAPGLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLV-TDLMRPIMPEALEGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            +G  GLA++  ++  LWHRRMGH+N  SL++L+   +NGVD    V D   CA+GKS Q  HPK A   V+R FQLV  D + P  P AL GFKYA K  D+ T+W EI L+K K  ++ +   F
Sbjct:  514 NGPGGLALKV-ESANLWHRRMGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATYDVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALF 637          
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.810e-23
Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 0
Query:    1 LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEIT-----SSSGAPGLA-----------------MQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVT-DLMRPIMPEALE---GFKYACKISDEYTRWTEIYLLKTKDGALHAFQSF 182
            L+VPGLGRN+FS     + G+  + + + P L      +PL +   D    +L+IT       SG   L                  + +ADT   WHRR+GHLN  SL++L+      VD+  ++    +C + K  Q  HPK +  ++ R  QLV  D M P+ P A      F YACK++D+YT+  E+YLL+ K     A  ++
Sbjct:  276 LIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADT---WHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTY 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77559.15786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J842_9PHAE6.160e-3542.35Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJN3_9PHAE1.100e-3442.35Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE5.350e-3441.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYB5_9PHAE1.350e-3142.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE1.810e-3145.14CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KXM1_9PHAE8.220e-3139.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1J1_9PHAE2.170e-2741.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKW9_9PHAE2.720e-2541.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBV6_9PHAE3.250e-2446.40Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KVF6_9PHAE1.810e-2332.21Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 6..173
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig77559contigH-paniculata_contig77559:22..570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig77559.15786.1mRNA_H-paniculata_contig77559.15786.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig77559 22..570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig77559.15786.1 ID=prot_H-paniculata_contig77559.15786.1|Name=mRNA_H-paniculata_contig77559.15786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
LVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYF
FSLEITSSSGAPGLAMQAADTVTLWHRRMGHLNRNSLNLLKTVDDNGVDF
GGAVPDYDICAVGKSHQLAHPKTADNQVQRSFQLVTDLMRPIMPEALEGF
KYACKISDEYTRWTEIYLLKTKDGALHAFQSFI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like