mRNA_H-paniculata_contig77272.15751.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: D7G1M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M4_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 5.440e-15 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 1
Query: 1 MDNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFY 117
MD+G APW +Q +CQPLDDIRGYFGEK+AFYFAWLGFY
Sbjct: 447 MDHGNSAPWFLQLFCQPLDDIRGYFGEKMAFYFAWLGFY 485
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.860e-13 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 1 MDNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG 120
MD G R W M+P+ QPLDD+R YFGEKLA YFAWLGFYG
Sbjct: 1191 MDEGQRVSWYMRPFSQPLDDVRCYFGEKLAMYFAWLGFYG 1230
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A7S2BNC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNC7_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.110e-12 Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 4 DNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG 120
DNG PW M PW QPL +IR YFGE +A YFAWLGFYG
Sbjct: 203 DNGSYCPWPMLPWAQPLSEIREYFGESVAMYFAWLGFYG 241
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: F0Y753_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y753_AURAN) HSP 1 Score: 64.7 bits (156), Expect = 4.460e-11 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 1 MDNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG 120
++ G R PW ++PW QPL +IR Y+GEK+A YFAWL FYG
Sbjct: 32 IEKGRRCPWYLKPWSQPLMEIRSYYGEKIALYFAWLSFYG 71
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: E9FRS9_DAPPU (Anoctamin n=8 Tax=Daphnia TaxID=6668 RepID=E9FRS9_DAPPU) HSP 1 Score: 62.0 bits (149), Expect = 4.160e-10 Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 7 NGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFY 117
+GY A WS P QPLD++R YFGEK+AFYFAWLGFY
Sbjct: 295 HGYWARWSKWPKYQPLDNVREYFGEKIAFYFAWLGFY 331
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A8J2S5F9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5F9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 6.930e-9 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 1 MDNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG 120
M G P M+PW QPL ++R YFGEK+A YFAWL FYG
Sbjct: 362 MLKGRSCPCYMRPWAQPLMEVRAYFGEKVALYFAWLAFYG 401
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A7S3NJZ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJZ7_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.420e-8 Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 1
Query: 19 APWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG 120
P ++P+ QPL +IR YFGEK+AFYFAWLGFYG
Sbjct: 389 CPRYLRPFAQPLMEIRSYFGEKIAFYFAWLGFYG 422
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A7S3XKI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKI6_HETAK) HSP 1 Score: 56.6 bits (135), Expect = 3.320e-8 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 1
Query: 19 APWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFY 117
PW + P+ QPL DIR YFGE+LA +FAWLGFY
Sbjct: 4 TPWYLVPFAQPLHDIRDYFGERLALFFAWLGFY 36
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: UPI000C6F70AC (anoctamin-7-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6F70AC) HSP 1 Score: 55.8 bits (133), Expect = 3.590e-8 Identity = 25/36 (69.44%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 10 GYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFY 117
GY A WS QPLD IR YFGEK+A YFAWLGFY
Sbjct: 74 GYWAQWSCWRRYQPLDHIREYFGEKIALYFAWLGFY 109
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Match: A0A3Q4HUU4_NEOBR (Anoctamin n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4HUU4_NEOBR) HSP 1 Score: 53.5 bits (127), Expect = 3.710e-8 Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 13 YRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFY 117
Y A WS QPLD IR YFGEK+A YFAWLGFY
Sbjct: 31 YWAQWSCWRRYQPLDHIREYFGEKIALYFAWLGFY 65 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig77272.15751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig77272.15751.1 >prot_H-paniculata_contig77272.15751.1 ID=prot_H-paniculata_contig77272.15751.1|Name=mRNA_H-paniculata_contig77272.15751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp MDNGYRAPWSMQPWCQPLDDIRGYFGEKLAFYFAWLGFYG*back to top mRNA from alignment at H-paniculata_contig77272:438..560- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig77272.15751.1 ID=mRNA_H-paniculata_contig77272.15751.1|Name=mRNA_H-paniculata_contig77272.15751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=123bp|location=Sequence derived from alignment at H-paniculata_contig77272:438..560- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig77272:438..560- >mRNA_H-paniculata_contig77272.15751.1 ID=mRNA_H-paniculata_contig77272.15751.1|Name=mRNA_H-paniculata_contig77272.15751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=246bp|location=Sequence derived from alignment at H-paniculata_contig77272:438..560- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |