mRNA_H-paniculata_contig7711.15732.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI) HSP 1 Score: 317 bits (812), Expect = 3.560e-99 Identity = 167/236 (70.76%), Postives = 188/236 (79.66%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIR 709
RPGA+EVS EEEISRVVPVIEGI A + T VTI+VDTR+A VA AAVAAGA VNDVSGGTFDP+ML+TVA GVPL MMHMRGTPQTMTSLTDYGG+VVG+V LE CSRAA+ AG+PRWMHVL+PGIGFAK+ SQSLLL+R+LDVI V +PLLVGPSRKRFIGELT E + QRDWGTVGACC++AERGAK+VRVHNV+ V ALAV+DAIR
Sbjct: 345 RPGAAEVSPEEEISRVVPVIEGIRDAAT---AGGEAAAGEGDDADTIGPVTITVDTRRAAVAEAAVAAGADAVNDVSGGTFDPQMLATVARTGVPLMMMHMRGTPQTMTSLTDYGGNVVGEVSQSLEACSRAADIAGVPRWMHVLNPGIGFAKTHSQSLLLMRELDVIAKHVGSPLLVGPSRKRFIGELTSESDPIQRDWGTVGACCSAAERGAKLVRVHNVKGAVLALAVSDAIR 577
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A6H5JQ34_9PHAE (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ34_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.730e-82 Identity = 153/243 (62.96%), Postives = 176/243 (72.43%), Query Frame = 2
Query: 5 PGASEVSTEEEISRVVPVIEGIVRATQ---EHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIRGAASE 724
PGA+EVS EEEISRVVPVI+GI A E + XXXX +T VTI+VDTR+A VA AA+AAGA VNDVSGGTFDP ML+TVA GVPL MMHMRGTPQTMTSLTDYGG++VG+V LE CSRAA+ +G+P SLLL+R+LDVI V +PLLVGPSRKRFIGELT E + QRDWGTVGACC++AERG K+VRVHNV+ VQALAVADAIR +
Sbjct: 190 PGAAEVSPEEEISRVVPVIQGIRAAATAGGEAAAGEGDDCXXXXXXATIGPVTITVDTRRAAVAEAALAAGADAVNDVSGGTFDPRMLATVARAGVPLVMMHMRGTPQTMTSLTDYGGNIVGEVSYSLEACSRAADISGVP------------------SLLLMRQLDVIAKHVGSPLLVGPSRKRFIGELTSESDPVQRDWGTVGACCSAAERGVKLVRVHNVKGAVQALAVADAIRNEGKD 414
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S1GH06_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GH06_CYCTE) HSP 1 Score: 219 bits (557), Expect = 5.920e-65 Identity = 123/247 (49.80%), Postives = 161/247 (65.18%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARV-KAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCAS-----AERGAKIVRVHNVRVVVQALAVADAIRGAASE 724
RPGA EV+ EEE+ R +PVI I ++ + IS+DTR A+VA+AAV AGA +VND+SGG FD ML+TVAELGVP+ +MHMRGTP+ M S+TDY DVV DVC+ L S+AAE AGIPRW V+DPGIGFAK +LLLL+ L + +++ P+L+G SRK FIG++TGE A++RDWGTV +C A+ + G I+RVHNV+ QA DAI A ++
Sbjct: 45 RPGAKEVAVEEELRRTIPVIRRIRELSE---------------------IPISIDTRHADVAKAAVEAGADIVNDISGGQFDENMLATVAELGVPVILMHMRGTPENMLSMTDYD-DVVEDVCEALLERSQAAEAAGIPRWRQVMDPGIGFAKDLRGNLLLLKNLRYLQSKLGDFPILLGTSRKGFIGKITGEPIAAERDWGTVASCVAALCLGDSSPGCHILRVHNVKGTKQATMTMDAIVRAEND 269
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S4EKT2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKT2_9STRA) HSP 1 Score: 217 bits (552), Expect = 8.410e-63 Identity = 130/250 (52.00%), Postives = 157/250 (62.80%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYG--GDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARV-KAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASA---------ERGAKIVRVHNVRVVVQALAVADAIRGA 715
RPGA+E+ EE+I R VPVI+ I ++E V +S+DTR A+VARAAV AGA +VNDVSGGT DP MLSTVA+L VP+ +MHMRGTP+ M LTDY G VV V L S+AAE AGIPRWM VLDPGIGFAK +L LL+ + ++ PLL+G SRK FIG+LTGE EA +RD+GTVG+C AS G I+RVHNV+ QA AV DAI A
Sbjct: 156 RPGATEIPVEEQIRRTVPVIQSIRERSKE--------------------VVVSIDTRHADVARAAVEAGADIVNDVSGGTHDPNMLSTVADLQVPIVLMHMRGTPELMQRLTDYDDQGGVVDGVIGALLERSQAAEAAGIPRWMQVLDPGIGFAKDLDGNLSLLKNYSDLRTKLGDFPLLLGTSRKGFIGKLTGETEAEKRDFGTVGSCIASLCLGNRGNDNSLGCNILRVHNVKGAKQATAVMDAIVAA 385
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A7S0C3W2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3W2_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.770e-62 Identity = 122/246 (49.59%), Postives = 156/246 (63.41%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLR----KLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERG----AKIVRVHNVRVVVQALAVADAIRGA 715
RPGA E++ EEE+ RVVPVI + + + V IS+DTR + VA+AA+AAGA +VNDVSGGTFD EMLSTV++L VP+ +MHMRGTP+TM ++T Y +VV DV L+ S+ A AGIP+W+ VLD GIGFAK +L LLR ++ A LL GPSRK F+G +TGEK A +RD+GT ACC + G I+RVHNV+ V QA+ V DAIRGA
Sbjct: 17 RPGAKEIAIEEELHRVVPVILSLRKVSN---------------------VPISIDTRHSHVAKAAIAAGADIVNDVSGGTFDEEMLSTVSKLSVPMILMHMRGTPETMQTMTSYS-NVVNDVAHSLKKLSQRASDAGIPKWLQVLDVGIGFAKDYHGNLELLRYGPGRVREYMGDDTAMLLWGPSRKGFLGTITGEKVAEKRDYGTTAACCMAVATGPLGACNIIRVHNVKDVKQAIQVMDAIRGA 240
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A835YYJ5_9STRA (Dihydropteroate synthase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ5_9STRA) HSP 1 Score: 220 bits (560), Expect = 2.840e-62 Identity = 130/268 (48.51%), Postives = 154/268 (57.46%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEA----------------------------SQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAIRGAAS 721
RPGA +V E+ RVVPV+ + A T ISVDTR+A VAR AV AGA +VNDVSGG D ML+ VAELGVP MHMRGTP+TMT++TDY DVVGDV L S AE AG+PRW+ VLDPG+GFAK+ QS+ LL L + A + PLLVGPSRKRF+G + G RDWGT GA CA+AERGA+IVRVH+VR V AL V DA+R A +
Sbjct: 294 RPGADDVEEAIELERVVPVVAALRAAG--------------------VTTPISVDTRRAAVARGAVRAGADLVNDVSGGAHDGAMLAAVAELGVPYVAMHMRGTPKTMTAMTDYA-DVVGDVTQALSAASARAEAAGVPRWLQVLDPGLGFAKTAPQSVQLLAGLVRVAAATRCPLLVGPSRKRFVGAVAGGXXXXXXXXXXXXXXXXXXXXXXXXXGNALTLEDRDWGTAGAACAAAERGARIVRVHHVRGVKHALRVVDAVRVAEA 540
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: UPI0019FC1E0A (Dihydropteroate synthase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FC1E0A) HSP 1 Score: 209 bits (531), Expect = 5.780e-61 Identity = 122/235 (51.91%), Postives = 154/235 (65.53%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
RPGA+EV EEE++RVVPV VRA E S V ISVDT +AEVARAAV AGA +VND+S TFDP+MLS VAELGVPL +MH+RGTPQTM LTDY D++ ++ L+ +AA+ AGIPR ++DPGIGFAK+ SQ+L +LR+L + PLLVGPSRK FIG + + R WGT ACCA+ GA ++RVH+V+ + + VADAI
Sbjct: 69 RPGATEVPLEEELARVVPV----VRALSETLS-----------------VPISVDTTRAEVARAAVEAGASLVNDISAATFDPQMLSVVAELGVPLILMHIRGTPQTMQQLTDYK-DLIAEILQFLDSRIQAAQAAGIPRKHLLVDPGIGFAKTFSQNLEILRRLGEFHT-LNCPLLVGPSRKSFIGHILNQPNPKARVWGTAAACCAAIAAGADLLRVHDVQQMQEVCRVADAI 280
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A3M1T6I9_9CYAN (Dihydropteroate synthase n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T6I9_9CYAN) HSP 1 Score: 205 bits (521), Expect = 1.270e-59 Identity = 124/235 (52.77%), Postives = 154/235 (65.53%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
RPGA EVS EEE++RVVPV VRA +E S + ISVDT ++ VARAAVAAGA VNDV+GGT DP+ML+TVAELGVP+ +MH+RGTPQTM +LTDY DVVG++C LE + AA AG+ R VLDPGIGFAK+ Q+L +LR+L + + + PLLVG SRK FIG + +R WGT AC A+ GA I+RVH+VR + V DAI
Sbjct: 58 RPGAIEVSLEEELNRVVPV----VRALRECSS-----------------IAISVDTSRSIVARAAVAAGADWVNDVTGGTGDPQMLATVAELGVPVVLMHLRGTPQTMQTLTDYE-DVVGEICQVLERQANAAIAAGVDRGAIVLDPGIGFAKTYEQNLTILRELPKVRS-LGYPLLVGVSRKSFIGHILDRPNPKERVWGTGAACAAAIVGGADILRVHDVREMRDICRVTDAI 269
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A0C1YCU8_9CYAN (Dihydropteroate synthase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YCU8_9CYAN) HSP 1 Score: 205 bits (522), Expect = 2.020e-59 Identity = 117/235 (49.79%), Postives = 153/235 (65.11%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
RPGA+++S E E RV+PVIE I RA+ + + S V ISVDT QA VARAAV AGA +VND+SGGTFD M STVA+LGVP+ +MH+RGTP TM TDY D++G++ D LE A+ AG+ +DPGIGFAK+ Q+L +LR++ V+ ++ P+L+GPSRK FIG L + + QR WGT ACCA+ GA I+RVH+ +VQ VADAI
Sbjct: 70 RPGAAQISIEAEQQRVIPVIEAI-RASDDPQLSQ---------------VVISVDTTQAAVARAAVRAGADLVNDISGGTFDAAMFSTVADLGVPIILMHIRGTPTTMQQHTDYA-DLIGEIYDFLERQIETAQAAGVGHHQIAIDPGIGFAKTYPQNLEILRQIPVL-RQLHCPILIGPSRKSFIGWLLNQPDPQQRVWGTAAACCAAIAGGADIIRVHDGDEMVQVAKVADAI 286
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Match: A0A349JM82_9CYAN (Dihydropteroate synthase n=3 Tax=Microcoleaceae TaxID=1892252 RepID=A0A349JM82_9CYAN) HSP 1 Score: 205 bits (521), Expect = 2.110e-59 Identity = 115/235 (48.94%), Postives = 154/235 (65.53%), Query Frame = 2
Query: 2 RPGASEVSTEEEISRVVPVIEGIVRATQEHESSXXXXXXXXXQPSTQATVTISVDTRQAEVARAAVAAGAHVVNDVSGGTFDPEMLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAERAGIPRWMHVLDPGIGFAKSQSQSLLLLRKLDVIGARVKAPLLVGPSRKRFIGELTGEKEASQRDWGTVGACCASAERGAKIVRVHNVRVVVQALAVADAI 706
RPGA+E+S EEEI RV+PV+E + + A + ISVDT +A+VA+AAVAAGA ++ND+SG TFD EMLSTVA+L VP+ +MH+RGTPQTM LTDY D++G++ + LE AA AGI + ++DPGIGFAK+ SQ+L +LR+L + + P+LVG SRK FIG++ + EA QR WGT AC + A I+RVH+VR + VADAI
Sbjct: 69 RPGAAEISLEEEIDRVIPVVEMLRQKADIF-----------------AAIPISVDTTRADVAQAAVAAGADIINDISGATFDSEMLSTVAKLAVPIILMHLRGTPQTMQKLTDYR-DLIGEITEFLESRIAAALAAGIDKSQIIIDPGIGFAKTYSQNLEILRELPKFRS-LNCPILVGVSRKSFIGQILNQPEAKQRVWGTAAACTGAIANSADILRVHDVREMHDVCQVADAI 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7711.15732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7711.15732.1 >prot_H-paniculata_contig7711.15732.1 ID=prot_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp MLSTVAELGVPLTMMHMRGTPQTMTSLTDYGGDVVGDVCDKLEGCSRAAEback to top mRNA from alignment at H-paniculata_contig7711:2239..6706- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7711.15732.1 ID=mRNA_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4468bp|location=Sequence derived from alignment at H-paniculata_contig7711:2239..6706- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7711:2239..6706- >mRNA_H-paniculata_contig7711.15732.1 ID=mRNA_H-paniculata_contig7711.15732.1|Name=mRNA_H-paniculata_contig7711.15732.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig7711:2239..6706- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |