prot_H-paniculata_contig7694.15703.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7694.15703.1
Unique Nameprot_H-paniculata_contig7694.15703.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length358
Homology
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BLAST of mRNA_H-paniculata_contig7694.15703.1 vs. uniprot
Match: D7FSS4_ECTSI (Poly(A)-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS4_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.350e-31
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 0 
Query:   20 ASAMIDDEGEAFARAVFGRFLRQATICRDIDDAIEHMHIVNDNSPTFDIRLGGEARIPVDRQLILALASKKKELLALCETRLQASR 105
            AS ++DD GEAFARAVF RFLRQATI RDIDD IEHMHIVND+S TF IRLGG+AR+PV R+LILALA+KKKELLALCE++L+  R
Sbjct:   11 ASGVVDDAGEAFARAVFCRFLRQATISRDIDDVIEHMHIVNDDSQTFAIRLGGDARVPVSRELILALAAKKKELLALCESKLRTPR 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7694.15703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSS4_ECTSI1.350e-3176.74Poly(A)-binding protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7694contigH-paniculata_contig7694:779..7766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7694.15703.1mRNA_H-paniculata_contig7694.15703.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7694 777..7766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7694.15703.1 ID=prot_H-paniculata_contig7694.15703.1|Name=mRNA_H-paniculata_contig7694.15703.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp
SQLRKPFIASRASVMSHETASAMIDDEGEAFARAVFGRFLRQATICRDID
DAIEHMHIVNDNSPTFDIRLGGEARIPVDRQLILALASKKKELLALCETR
LQASRQAAATAAAAAAAAAAAATANTSSSTCHSPCATTTSPADGPTPTNS
GQHQQQAENASDRTYAMASGALLPSSLPPPPTAHLLVFPPPAALAATGSS
SHFASSTEMGGATATAAASTTAMAARSSSAVAASVSAAAPVATISGAVST
VAGVGKVAVAQQSQQQKQHVAVGESAGEVAERTAPPVVVAQHAAPQTTTT
TTTTTTTTPPPPPAAKSIPVVPATASSPGYAPPQPASAAPPFREPRDRGG
PRTVFVRK
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