prot_H-paniculata_contig76933.15702.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig76933.15702.1
Unique Name	prot_H-paniculata_contig76933.15702.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	123

Homology

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: D1H013_ECTSI (Cytochrome oxidase 2 (Fragment) n=9 Tax=Ectocarpus TaxID=2879 RepID=D1H013_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 3.730e-80
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIADEDLVIPEALGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS
Sbjct:  381 FDSYLIADEDLVIPEALGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 502

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: D1H001_9PHAE (Cytochrome oxidase 2 (Fragment) n=3 Tax=Ectocarpus fasciculatus TaxID=43935 RepID=D1H001_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 1.560e-79
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIADEDLVIPE LGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS
Sbjct:  383 FDSYLIADEDLVIPEVLGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 504

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: E6ZES9_ECTSI (Cytochrome-c oxidase n=4 Tax=Ectocarpus TaxID=2879 RepID=E6ZES9_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.170e-75
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIADEDLVIPEALGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS
Sbjct: 1158 FDSYLIADEDLVIPEALGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 1279

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: E3Q189_9PHAE (Cytochrome oxidase 2 (Fragment) n=24 Tax=unclassified Ectocarpus TaxID=867790 RepID=E3Q189_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.960e-75
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 114
            FDSYLIADEDLVIPEALGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT
Sbjct:  150 FDSYLIADEDLVIPEALGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 263

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: D1H019_9PHAE (Cytochrome oxidase 2 (Fragment) n=18 Tax=Ectocarpus TaxID=2879 RepID=D1H019_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 8.720e-75
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 114
            FDSYLIADEDLVIPE LGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT
Sbjct:  153 FDSYLIADEDLVIPEVLGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 266

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: D1H027_9PHAE (Cytochrome oxidase 2 (Fragment) n=1 Tax=Kuckuckia sp. Ec160 TaxID=690469 RepID=D1H027_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 8.720e-75
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 114
            FDSYLI DEDLVIPEALGTGKAGKVF LLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT
Sbjct:  153 FDSYLITDEDLVIPEALGTGKAGKVFRLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 266

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: D1H031_9PHAE (Cytochrome oxidase 2 (Fragment) n=27 Tax=Ectocarpus TaxID=2879 RepID=D1H031_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.750e-74
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 114
            FDSYLIADEDLVIPEALGTGKAGKVF LLEVDNRL VPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT
Sbjct:  153 FDSYLIADEDLVIPEALGTGKAGKVFRLLEVDNRLLVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLT 266

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: A0A0U1XDJ3_9PHAE (Cytochrome-c oxidase n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XDJ3_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.880e-73
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIADEDLVIPE  GTGKAGKVF LLEVDNRLFVPTNTHIR+L+TSADVLHSWAVPSLG+KVDACPGRLNQVF+FVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS
Sbjct: 1177 FDSYLIADEDLVIPEVFGTGKAGKVFRLLEVDNRLFVPTNTHIRLLVTSADVLHSWAVPSLGIKVDACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 1298

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: Q94YZ5_PYLLI (Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ5_PYLLI)

HSP 1 Score: 246 bits (628), Expect = 2.490e-73
Identity = 116/122 (95.08%), Postives = 120/122 (98.36%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIADEDLVIPEA GTGKAGKVF LLEVDNRLFVPTNTHIR+L+TSADVLHSWAVPSLGVKVDACPGRLNQVF+FVKREGVFYGQCSELCGVNHGFMPIVVQAVSQD+YLTWVGKRLCS
Sbjct: 1161 FDSYLIADEDLVIPEASGTGKAGKVFRLLEVDNRLFVPTNTHIRLLVTSADVLHSWAVPSLGVKVDACPGRLNQVFIFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDDYLTWVGKRLCS 1282

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BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Match: A0A089MYN4_PETFA (Cytochrome-c oxidase n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MYN4_PETFA)

HSP 1 Score: 246 bits (628), Expect = 2.610e-73
Identity = 114/122 (93.44%), Postives = 120/122 (98.36%), Query Frame = 0

Query:    1 FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSADVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 122
            FDSYLIAD+DL+IPEA GTGKAGKVF LLEVDNRLFVPTNTHIR+L+TSADVLHSWAVPSLG+KVDACPGRLNQVF+FVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS
Sbjct: 1186 FDSYLIADDDLIIPEAYGTGKAGKVFRLLEVDNRLFVPTNTHIRLLVTSADVLHSWAVPSLGIKVDACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDEYLTWVGKRLCS 1307

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig76933.15702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1H013_ECTSI	3.730e-80	99.18	Cytochrome oxidase 2 (Fragment) n=9 Tax=Ectocarpus...	[more]
D1H001_9PHAE	1.560e-79	98.36	Cytochrome oxidase 2 (Fragment) n=3 Tax=Ectocarpus...	[more]
E6ZES9_ECTSI	1.170e-75	99.18	Cytochrome-c oxidase n=4 Tax=Ectocarpus TaxID=2879...	[more]
E3Q189_9PHAE	1.960e-75	99.12	Cytochrome oxidase 2 (Fragment) n=24 Tax=unclassif...	[more]
D1H019_9PHAE	8.720e-75	98.25	Cytochrome oxidase 2 (Fragment) n=18 Tax=Ectocarpu...	[more]
D1H027_9PHAE	8.720e-75	98.25	Cytochrome oxidase 2 (Fragment) n=1 Tax=Kuckuckia ...	[more]
D1H031_9PHAE	1.750e-74	98.25	Cytochrome oxidase 2 (Fragment) n=27 Tax=Ectocarpu...	[more]
A0A0U1XDJ3_9PHAE	1.880e-73	94.26	Cytochrome-c oxidase n=1 Tax=Colpomenia peregrina ...	[more]
Q94YZ5_PYLLI	2.490e-73	95.08	Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis ...	[more]
A0A089MYN4_PETFA	2.610e-73	93.44	Cytochrome-c oxidase n=1 Tax=Petalonia fascia TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01166	CYCOXIDASEII	coord: 89..106 score: 67.41 coord: 51..71 score: 80.15 coord: 27..48 score: 54.83 coord: 71..88 score: 56.03
None	No IPR available	PANTHER	PTHR22888:SF9	CYTOCHROME C OXIDASE SUBUNIT 2	coord: 1..120
None	No IPR available	PANTHER	PTHR22888	CYTOCHROME C OXIDASE, SUBUNIT II	coord: 1..120
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 1..120 e-value: 3.5E-43 score: 148.6
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 25..118
IPR002429	Cytochrome c oxidase subunit II-like C-terminal	PFAM	PF00116	COX2	coord: 1..107 e-value: 5.6E-43 score: 145.7
IPR002429	Cytochrome c oxidase subunit II-like C-terminal	PROSITE	PS50857	COX2_CUA	coord: 1..118 score: 35.935
IPR001505	Copper centre Cu(A)	PROSITE	PS00078	COX2	coord: 52..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig76933	contig	H-paniculata_contig76933:216..584 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig76933.15702.1	mRNA_H-paniculata_contig76933.15702.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig76933 216..584 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig76933.15702.1 ID=prot_H-paniculata_contig76933.15702.1|Name=mRNA_H-paniculata_contig76933.15702.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
FDSYLIADEDLVIPEALGTGKAGKVFSLLEVDNRLFVPTNTHIRMLITSA
DVLHSWAVPSLGVKVDACPGRLNQVFMFVKREGVFYGQCSELCGVNHGFM
PIVVQAVSQDEYLTWVGKRLCS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR002429	CcO_II-like_C
IPR001505	Copper_CuA