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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1142 |
| Cds size | 738 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7692.15700.1 >prot_H-paniculata_contig7692.15700.1 ID=prot_H-paniculata_contig7692.15700.1|Name=mRNA_H-paniculata_contig7692.15700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
MLPAKVTTGQGQQPPGRGETQTDGVASGSATSNSSLEIYTSIANGNLSSK
VHGSTTSTGNSQALLDRQKNVAGPRSGNIGNVDGADCAAGVSTTVSTRSS
DIRTGDNGDGGNSQGTPRIPPEPDETETEEVATVQAGIENRGTYSPPFKY
LPPTPPQVLYATSRPTTRRSSFTSSMDDFSASRGSDIGLQGSEHPKYRPT
DRSGDRSAELSPKPLVPRSGAYSGDGGCVRKSAMTGAGGRGGMHME back to topmRNA from alignment at H-paniculata_contig7692:4583..10701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7692.15700.1 ID=mRNA_H-paniculata_contig7692.15700.1|Name=mRNA_H-paniculata_contig7692.15700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6119bp|location=Sequence derived from alignment at H-paniculata_contig7692:4583..10701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGCGTCCAGGAAGGATATAAAACATAGAGACTGAGAGGAAACCACGTG
ATTCCAAGGGAGGTGAGACTTAGTAGTTGATGGGGTTCAATCCAACATGC
TGCTGTACTCAAAAGCGGGGCATTCTCGATGAGACAGACCGTACCACAAA
TCACTAGGTGATAGACGTACCCTGACTGTCTATACTATGCCTATCTCTTT
CATGGCGGTAGATGTAGTCTATTTCCACACAACGGTACTGTAGACAGTAC
GTCGGGATTCACAGCACGAGCGAGCTTGGTTGGCACTCTGACAGCTACTT
ATTGATGACAAATTGATTCCGCTATAGTTATTTTACTGGTGTATTAGAGT
GCTGTGTGAGATGATGTCACCATGCGGAGAATATACGAAAACGAACGATT
TGTAATACACGTGTATACAGAAATTGAACCAGCACACAACAAACACAGCC
AAGCCACACTTTCGGCCTGTTAGTAAGAAATTTTTGTTTCTGATAGAGCT
CAAACCCTACTCCGTGGTATATAGTTTTACCCCCGGTTCTACTCGCAAGT
GACTACTGTAAATAGAAGAGTGTCCTCCATTTATTACATGGGAATTTGTA
TGGGGAGATGGTTCGACCTCTTCTCCCAAAGCTTGAAAATTCAAAAACAT
GAGCGCGGGGAGTTTCCATCCTGCTGTCGTGTTATTTCTAAATAGGAACG
GCTGAACCTGGTGACATCTCGTGCGCCTCGCCTGGCCTGAATTGCTCAGT
AGTGCCTCCGAGGCTGGCGGTTGAACGCATGTTCTTGTCACTGCCCGATA
TCTCCCGCGGTTTGTATAACCATGATCTGGGGATGGCTGATTGTTGTCGA
ATCGCTTATTTTTATTGCCGATGTCGTCCAATAGTACTCCCTGCAAAAAC
CTTCGACGACGGCACTTGGTTCTCTATGCGCGATTACCTGTGTCCGATAT
ATCCCATTCTGTGTGGTGTAACTATTATTCCGGATTGAGTGCTGTAGGCT
TTGCTGCGTTGTTCATCGCCAATATCGTCCAATAGTACACCTGTAACACG
CACGACAGCACTTGGCCATCTCAATGCGACTGTCCCCAGAGAGTCCTTCG
TACTTGTATACAGTAAAATGTATTGACAGCAGAATAATTATCTGGAACAG
ATGATACGAAGAGACAGTGCCTGCGTATAGAAAGTGGTGGAAGATTAGCC
CCCACTGCACGCTGCCAGGTGATTTGTAATTTACAACAAAATGCACATGA
AGGATCAGCGATTTGAATGACCGGCCGAGGAAGCAGCACTGTGAACTTGG
AAGAGCCAGACGCTAAACTGGTAATCCTTACAGTGCTACTCATGTTGGAT
CTTTACTGTAGGATAGATACATCGTATGTATATAAATCAAGTGAAAAAAA
ATCTCAACCATGAATAGATCCCACAAGTTCCCCCATGTGGGTCAATGCGG
CTCATATACATGGTTCTAGGATCTGCTATTTGGGTCATTTCTTTTATGAA
AATGGGCGTTAATGTAATGTGCTGCTCGAAGATGGCAATATAAATTGACC
ATTGATTGTACAGGCGAGGAAGTGGTCTCTTATAGTATCAGGGAAAAGCA
CTTCCTGTTTCGTCAGCATTTTCCCCTCCTCTGAAAGAGCAAGAGTGGTC
TATTCGCGATTATTTAACCCCTCTGGAGCGCAAAATAATGTGAAGCCCCC
CCCACCCCCCTCGCTTTTTCTCTGCTCCCCCCTCACCTTCCAAGCGTCCT
GGACTTTCAGCTGCTTTTGTTTGGAATAATTAGGCAACCACGCTTTATTG
TCGAGAACCATCTATTTGACGCAAGTCTCACGTTTTATTTATACTTCCAT
ACATGTATAGTACAATCCCGATCCGAAGCAATAGTTTTCTATACTGTAGG
TGATAGGGGATGGTGCACCACACTACATGGGGAAAACTCCCCCCTACTGA
CGGGGAAGGGGTTGTGATCATTATTACACAGGATTACATGGGATAGGTAC
GGTGCTCTTTGGCCACAAGGGTGCCATGCACCAATCACATTCCCCAAATC
GAGACGAGGTGCGTGGTGGATGGCCATGTTTTCCTTCACGTCAACCTCAC
ATCGGATAGCCACGTATCTCTTCACAATGCTACGACAATACTGAAACGTG
GAGAGGAATTCAGATGCTCAGGCGTTGAAACTGTCTGCTTTGTTGTGTTT
CTGCTGGGCGATAGTGATGGTCCTCGAGTGTAGGTAAAGTGGTTAGAAAT
GAGAACAGCAGCGTGTACATACTGAATCGACGACGGAGCTCATCCTGCGT
ACAAACATATCACCCCCCCCTATGATCAATCAGCCCCGTCAAGGCTACCG
GTACGTGATTCTTAGCGTACGCTGCTGTACCACACGCCCCTACAGGGGCT
AAGCTCCGTTGTTAATCATGATCTAATGTTGTTGATAACCATACACAAGT
GAGATTTTAGGTCAGCCAGCTAGCTACATAGCCCTAACATGGATACGATG
GAAATGTACTCCATCTGTCCCAGAAGTCTGTTCCGTTAGCCATTTACCGC
ATCTCTTCAGGATGGTGTCCGATGTCAAAGCGGATTGTTGCGTTGGATTG
ATGGTGTTGACCAATCGAATAATACGATAGTTGATTTAGACGGGGAAAAC
GTCAAGAATCCAATGCAACAATCAGTTTTGAAATCGAACATCATCCTGAA
GAGTTATGCGGTAAATAGCTAAATAACGGAACAGTCTTATGGTACAGAGG
GAGTATATATTTTTAATGAGCATCGTCCAGTAAAAACGTCTGATAAATTA
GCACTCTTAGTTGGTTTGTTAGTTAATCTCCAACTGTTGTATGTCCCGTC
TGTATTAGTAAGAGGTGATATAAACACTGAATTCCTTCGTTGATGGATCT
CACCGGTTAGCGTCGTATTTATACCTGTTGTTGGAAGGTGATGCACGGTT
TTGCCCAGATGTATGCACGCTTCCATTTAGCAGACAAGTCGATGTAAACC
TTTTGAAGGACAGTGGGGTTATTATATGACAGCGCTAGAGGTCTACGAAT
TGCGGCAAGTGAGTAGTTGACTGGTGAATAGTGAATAAGCCCCCCTCGCC
CGCCCCCATCGTTTTTGGTCATTATCCATTACGTTGTCCCCCTTCCCCTA
GTATAATCAATGTACTTATACAGGGGAAACGTGTGGGTCGTATAAATGAG
TACTTCTTGAGCAGATTTCTAAAGGAAGCGAAACGAATGAGCCTGCATTT
CATTTTCTTGCCATTTCTTGTTGATGACATTATGAACCTGTGTCATGTAC
TATACAGTACGAATTTTTCATCTCCTTTGTTTTCGAAGCATAACAACACA
GCAACGGCTCCCATCGGTAGTCAACAGTGAGCGTTGTTTATAGGATTTCC
ACCTCGCGTGCACCACGAGCTCGGATACTGCATTACTACGTTAATAGTGA
GTATTACTGAGCAAATGGTAAAACGATATTCGGTATTTTCGGGAATAATA
CGGTGGCCACTTGGATTTTGAAAAACAAAGCACCGATACGCTCTTTCCAC
GGAATATAGCTTTATCGTTGTGCTTTTAGAATTCTGCTTTCCTCAATGGT
ACCTGTTTCGTATGCGGTACTAATTTTTTTTTTTTTTAAGTGTAAAATAC
GGAGAACACCTCCCTCTGGTTTATAGGTCTCACATGGGAATACTTTGGTA
TCATATAATAGATGTTGTATTGATCAAGCAAGAATAAAATCTTACTAGAT
AGCTTGAAGTAAATAAATGAAGACAAAATACTAAATTAGTTCATGCGACG
ACCACTACCGTTCAGGCACTTCCTACGGTTATTATTAATCTATAAAAGCA
GATATCTCATGTGTTGTCTCATCTTTGCTCCCGCCGTTGCTAGCACTCTT
ACTCCCTTCTGCCGCCCCCCCTTGACAGATTGCGATTGGTGTACGGTCAT
ATCATTGTTGGATATCGCAAATGAAACCCGCTTCCTTGCGGCCTACAATA
CACTCACATCAGATCGGCAACGGCCTAACCCCAAGCCTAACCCCAAGCAA
AGGAGAAAAGGAGGTACTAGTAGCAGTCAGCGACAGGCGCGACGGACATC
CTGGACACACTCATCCCCCCATCAGACGCGAAAGTGGAACAAGATCTAAT
ATACCGGGAGTATCAACAAGAGAGAGACGCAGCGTTGTGATTGACACCAC
CGCTCCTCCCCCAAGTGTCAACGGTGCGCCGGCGGTGCTGCATAACGTAT
GGCAAGCGGGATAGGGTGACATGCTACCAGCGAAAGTGACCACAGGACAA
GGACAGCAGCCGCCAGGGCGAGGAGAAACACAGACAGACGGTGTAGCGTC
GGGAAGCGCTACCAGCAATAGTAGCCTTGAGATTTACACCTCGATAGCCA
ACGGCAACTTGAGCTCCAAGGTGCACGGCTCGACGACGTCGACTGGAAAC
AGTCAAGCGCTTCTTGATAGGCAGAAAAACGTTGCTGGTCCTAGAAGTGG
AAACATTGGAAACGTTGACGGGGCCGATTGTGCTGCGGGCGTGAGCACGA
CGGTAAGCACTCGGTCAAGCGATATCAGAACTGGCGACAACGGCGACGGA
GGTAACTCTCAGGTGCGTAGCTATTACCTGCCAGTATAGTCATTTACCAC
GCCCACAGCTTCGTGGAATTGAATGTCGCTGTTGATCTTTTCCGTGCTTA
CGGTAACAGCAACAGATCTTCGTTTCTGCGGGTGGGGGTGTGCTTGCTGC
TATTACGGAGGCACATTCATAATAGGACCGAATGTTTGCTCTAACGGAAA
ACGAAAGTCTGAGTCTATTCGACCGAACTAACACATTCGGAACCGATATG
TGTGGGATCGTCTCAATCATGCGGTGTGCACCCACGTTCCGGTTATGATT
CAACCCCGAGATTGTGGAGATACACATCGAGTTGAATAGGGGGCACACAT
CGGGTGAAAGAGAGCAGCAATTTGGTCTGACTATTAACAAGGTGCCTCCC
TAATAAAATTACTGTAGCGATGAGGACGTACGTGTAAAGTGCGTCTGTGG
GGAATTGTTTCATAGGTCATTAAGAGTATTGATGTAAGACAGACAGTTTT
TTTTTTTTTTTTCTAAAATTCGGTACTAGTGCGAGGAAGTATTGCAATAG
TTTGTGCGAATTTTGCCGTATTTCTCGTAGGATAGTAATTCTAGGGTATT
TCGAGAACAAGCACTGTTCATTGTGAGAAGGTGGACTTTTTGTTTTGCAG
CAGTATAGTGCATAATTTGAAACAAGAAAAATTTCGGCAGTTATAGAATC
TCACGACCTCTAATTAGAGTCTGAGCGGTTGAACCCATGTGTTACTCAAA
AACGAGCATGAAGGACCGTCCAAAAGCCATCGAATCGCTGCATACTGTAA
TAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAAAGCAT
GAAGGAAGGTCCTTCCTTCACACCTTCATTCAAACCTTTGTGGGGTATTC
AAGTTTTTGGAGTGCGAATTCACCCGCCACAAGTGTTTTCTTTCTTTTTC
AGTATCAAAGTGGAAGGTTGGGGTCCTAAGGTGTGGGGTTGAAGGTTATG
TAGAGCTGTACTTTACTTTTACTGAGTTTTTGTTTTCCAAATACCCTCGA
AGGGCCCCCCGTATCCCAAAGCGCTTTGCAGTAAGTTCTGAACGCCACGA
CCTTGCGCTACTACACTCTGCAGGGAACGCCACGGATACCTCCGGAGCCG
GACGAAACGGAAACCGAAGAAGTGGCAACAGTGCAGGCGGGCATTGAGAA
TAGAGGAACATACTCACCTCCTTTCAAATACCTACCGCCAACCCCACCTC
AGGTCCTCTACGCAACATCTCGCCCAACAACGAGACGCAGTAGTTTTACT
AGTAGCATGGACGATTTTTCTGCCAGCCGTGGATCCGACATCGGACTCCA
GGGCTCCGAACACCCCAAATACCGCCCCACAGATCGTTCCGGAGACCGTT
CGGCAGAACTGTCTCCGAAACCACTCGTCCCTCGATCGGGTGCCTATTCT
GGGGATGGTGGATGCGTTCGAAAATCGGCTATGACGGGGGCGGGGGGAAG
AGGGGGTATGCACATGGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7692:4583..10701+ >mRNA_H-paniculata_contig7692.15700.1 ID=mRNA_H-paniculata_contig7692.15700.1|Name=mRNA_H-paniculata_contig7692.15700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at H-paniculata_contig7692:4583..10701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTACCAGCGAAAGTGACCACAGGACAAGGACAGCAGCCGCCAGGGCG
AGGAGAAACACAGACAGACGGTGTAGCGTCGGGAAGCGCTACCAGCAATA
GTAGCCTTGAGATTTACACCTCGATAGCCAACGGCAACTTGAGCTCCAAG
GTGCACGGCTCGACGACGTCGACTGGAAACAGTCAAGCGCTTCTTGATAG
GCAGAAAAACGTTGCTGGTCCTAGAAGTGGAAACATTGGAAACGTTGACG
GGGCCGATTGTGCTGCGGGCGTGAGCACGACGGTAAGCACTCGGTCAAGC
GATATCAGAACTGGCGACAACGGCGACGGAGGTAACTCTCAGATGCTACC
AGCGAAAGTGACCACAGGACAAGGACAGCAGCCGCCAGGGCGAGGAGAAA
CACAGACAGACGGTGTAGCGTCGGGAAGCGCTACCAGCAATAGTAGCCTT
GAGATTTACACCTCGATAGCCAACGGCAACTTGAGCTCCAAGGTGCACGG
CTCGACGACGTCGACTGGAAACAGTCAAGCGCTTCTTGATAGGCAGAAAA
ACGTTGCTGGTCCTAGAAGTGGAAACATTGGAAACGTTGACGGGGCCGAT
TGTGCTGCGGGCGTGAGCACGACGGTAAGCACTCGGTCAAGCGATATCAG
AACTGGCGACAACGGCGACGGAGGTAACTCTCAGGGAACGCCACGGATAC
CTCCGGAGCCGGACGAAACGGAAACCGAAGAAGTGGCAACAGTGCAGGCG
GGCATTGAGAATAGAGGAACATACTCACCTCCTTTCAAATACCTACCGCC
AACCCCACCTCAGGTCCTCTACGCAACATCTCGCCCAACAACGAGACGCA
GTAGTTTTACTAGTAGCATGGACGATTTTTCTGCCAGCCGTGGATCCGAC
ATCGGACTCCAGGGCTCCGAACACCCCAAATACCGCCCCACAGATCGTTC
CGGAGACCGTTCGGCAGAACTGTCTCCGAAACCACTCGTCCCTCGATCGG
GTGCCTATTCTGGGGATGGTGGATGCGTTCGAAAATCGGCTATGACGGGG
GCGGGGGGAAGAGGGGGTATGCACATGGAGGGAACGCCACGGATACCTCC
GGAGCCGGACGAAACGGAAACCGAAGAAGTGGCAACAGTGCAGGCGGGCA
TTGAGAATAGAGGAACATACTCACCTCCTTTCAAATACCTACCGCCAACC
CCACCTCAGGTCCTCTACGCAACATCTCGCCCAACAACGAGACGCAGTAG
TTTTACTAGTAGCATGGACGATTTTTCTGCCAGCCGTGGATCCGACATCG
GACTCCAGGGCTCCGAACACCCCAAATACCGCCCCACAGATCGTTCCGGA
GACCGTTCGGCAGAACTGTCTCCGAAACCACTCGTCCCTCGATCGGGTGC
CTATTCTGGGGATGGTGGATGCGTTCGAAAATCGGCTATGACGGGGGCGG
GGGGAAGAGGGGGTATGCACATGGAG back to top
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