prot_H-paniculata_contig7683.15690.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7683.15690.1
Unique Nameprot_H-paniculata_contig7683.15690.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length309
Homology
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BLAST of mRNA_H-paniculata_contig7683.15690.1 vs. uniprot
Match: D7FXT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXT6_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 2.070e-9
Identity = 92/260 (35.38%), Postives = 116/260 (44.62%), Query Frame = 0 
Query:   57 VRDKIAQFGDKNAGVAVNIVHSSAPSSRFQPPKTSSTCVSHPAAGGNS-GSPSVSASAGNNVGLESSTGPVRKLKVPDVFQNAKKPPDGPVLARVSSAPTLAPAKKWGTVGGSTAGDASGSKPKPSVGAVVGGSNSFSANARGLTSLVSSASSTSGSSIKRQPKRDKSVKSDPPKRDLLGL---GSMP---KAGPGRTAVGSKTVASNPVPSIGLSSASGRSKS---SPQLKAGPRRLQLKTISAEKQRAALGLDKDNED 306
            VRDKIA FG   +           P+  F       T V  P +  N+  SP+ S+S G +         V KLKVPDVF+NA KP D PV   +  AP+ AP KKW T  GS        K   S G   G S   SA A        +    +  +  ++P  D + K     RD+LGL   GS P   +  P     G     S         + SGR+     S + KAGPR+L L  ISAEKQRAAL LDK+ E+
Sbjct:    3 VRDKIAGFGGPASTGMGGXXXXXRPNGGFGSTARIGTNV--PTSSSNARASPASSSSLGGDPDS------VSKLKVPDVFRNATKPADIPVAVSMEVAPSAAP-KKWATPAGSV-------KLGVSNGGGFGASRVGSAPAGAPGWKARNGGDAAPDTTAKRPVSDAAKKP----RDVLGLTSAGSAPSLVRPPPAAVESGPTATGSXXXXXXXXRAESGRASPPSRSAKPKAGPRKLNLTRISAEKQRAALCLDKNLEE 242
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7683.15690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXT6_ECTSI2.070e-935.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7683contigH-paniculata_contig7683:1683..3894 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7683.15690.1mRNA_H-paniculata_contig7683.15690.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7683 981..8954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7683.15690.1 ID=prot_H-paniculata_contig7683.15690.1|Name=mRNA_H-paniculata_contig7683.15690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MIVGTENAIEGGSVRDKIARFGHTTSSYRPTPASTTSGGVNRGGGRSSEE
RGGGGSVRDKIAQFGDKNAGVAVNIVHSSAPSSRFQPPKTSSTCVSHPAA
GGNSGSPSVSASAGNNVGLESSTGPVRKLKVPDVFQNAKKPPDGPVLARV
SSAPTLAPAKKWGTVGGSTAGDASGSKPKPSVGAVVGGSNSFSANARGLT
SLVSSASSTSGSSIKRQPKRDKSVKSDPPKRDLLGLGSMPKAGPGRTAVG
SKTVASNPVPSIGLSSASGRSKSSPQLKAGPRRLQLKTISAEKQRAALGL
DKDNEDAL*
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