Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1349 |
| Cds size | 1083 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1250.1568.1 >prot_H-paniculata_contig1250.1568.1 ID=prot_H-paniculata_contig1250.1568.1|Name=mRNA_H-paniculata_contig1250.1568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
MQLRSRRSRHSGGRTSLDSLAYSSEGSPASGRRSCKGNAKSTTVGTIASL
PAQVLNGDHPAGNDAKIPDSMRAWLDDDASSSNDDTNRRITLDVGLPETR
GGHSNEERRRNLLSPGCGTVTLDSRLHDATCRPAEFADTAAVAAAAAMSE
AAFAGEPDLDATPAPDGHVTPAVPGQKIIFPVDIALSSPPIAAAATRAAA
EARPAVQRSVLPPRRDHHDSGDDVPQQAAGLAEGDAEQHDLQTPLQGGDL
TSKSLKPTTSAADEMKRWLSDSDDEENIEATNSSGGHAPGGAFVEPFASS
SVHQAAITADQRRPPADAVPDKTQNDIFRRSKLTLSAKEEMVNWLSESDE
EKTGTNNILEW back to topmRNA from alignment at H-paniculata_contig1250:7939..9285+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1250.1568.1 ID=mRNA_H-paniculata_contig1250.1568.1|Name=mRNA_H-paniculata_contig1250.1568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1347bp|location=Sequence derived from alignment at H-paniculata_contig1250:7939..9285+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAAGTCTACGTGCTGTGAGCTCGAGCACTGGAATCAGCAGCTATTGCT
CGACCTTCATTCTTTGCCCAGAATCCTCGGACACCACATGCACAGGTCCA
GCCTAAGTCAGAGGCAATTGGGAAGTGGAAGAACCGACGGGATACTGAAG
GCGCGGCGTTATCACGAGAGATATTTTTTTGAGGGGAACAGCAACAACTC
ACACAAACGTTCTGCGGACCCACCACCTGTTACTGAGTAGAGTAGTTCTT
CCAACAACACTAACATGCAGCTTCGATCAAGGAGAAGCAGGCATTCCGGC
GGAAGGACTTCGCTGGACTCCTTGGCTTACTCTAGCGAAGGCTCGCCGGC
GTCCGGTCGTAGGAGCTGCAAAGGGAACGCAAAATCTACGACCGTAGGCA
CAATTGCATCCCTACCAGCCCAGGTTCTAAATGGCGATCATCCTGCAGGC
AACGACGCCAAAATCCCTGATTCGATGCGAGCATGGCTAGATGACGATGC
TAGCTCATCGAATGATGATACCAACAGGAGAATAACCTTGGATGTAGGTC
TACCAGAAACACGCGGTGGACACTCCAACGAAGAGCGCCGAAGGAATTTG
CTATCGCCTGGGTGTGGCACTGTGACTCTTGATTCCCGGTTACACGACGC
AACATGTAGGCCCGCAGAATTCGCTGATACAGCTGCAGTAGCTGCGGCTG
CTGCGATGAGTGAAGCAGCTTTCGCGGGGGAGCCAGATTTAGATGCTACT
CCCGCGCCGGATGGCCACGTTACGCCTGCCGTCCCTGGCCAAAAAATTAT
TTTCCCTGTTGATATTGCACTATCATCACCACCAATAGCCGCAGCAGCAA
CGAGAGCAGCTGCTGAAGCTCGGCCTGCAGTACAACGGTCGGTTTTACCA
CCCCGCCGAGACCATCATGATAGTGGTGACGATGTGCCTCAGCAGGCCGC
GGGCCTGGCCGAAGGTGATGCAGAACAACACGATCTTCAGACACCGCTCC
AGGGTGGAGATCTTACGAGCAAATCCTTGAAGCCGACCACCTCAGCCGCA
GACGAGATGAAACGTTGGCTATCAGATAGCGATGATGAAGAAAATATCGA
AGCTACAAACAGCAGCGGCGGACACGCCCCCGGAGGAGCGTTTGTCGAAC
CCTTCGCCTCCTCCAGTGTACATCAAGCAGCTATTACCGCTGACCAACGG
AGGCCACCAGCTGACGCTGTACCCGACAAAACGCAAAACGACATTTTCAG
GCGTTCAAAACTAACCCTATCGGCGAAAGAGGAAATGGTCAATTGGCTAT
CGGAAAGTGATGAAGAGAAAACAGGGACCAACAATATTTTAGAGTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1250:7939..9285+ >mRNA_H-paniculata_contig1250.1568.1 ID=mRNA_H-paniculata_contig1250.1568.1|Name=mRNA_H-paniculata_contig1250.1568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig1250:7939..9285+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGCTTCGATCAAGGAGAAGCAGGCATTCCGGCGGAAGGACTTCGCT
GGACTCCTTGGCTTACTCTAGCGAAGGCTCGCCGGCGTCCGGTCGTAGGA
GCTGCAAAGGGAACGCAAAATCTACGACCGTAGGCACAATTGCATCCCTA
CCAGCCCAGGTTCTAAATGGCGATCATCCTGCAGGCAACGACGCCAAAAT
CCCTGATTCGATGCGAGCATGGCTAGATGACGATGCTAGCTCATCGAATG
ATGATACCAACAGGAGAATAACCTTGGATGTAGGTCTACCAGAAACACGC
GGTGGACACTCCAACGAAGAGCGCCGAAGGAATTTGCTATCGCCTGGGTG
TGGCACTGTGACTCTTGATTCCCGGTTACACGACGCAACATGTAGGCCCG
CAGAATTCGCTGATACAGCTGCAGTAGCTGCGGCTGCTGCGATGAGTGAA
GCAGCTTTCGCGGGGGAGCCAGATTTAGATGCTACTCCCGCGCCGGATGG
CCACGTTACGCCTGCCGTCCCTGGCCAAAAAATTATTTTCCCTGTTGATA
TTGCACTATCATCACCACCAATAGCCGCAGCAGCAACGAGAGCAGCTGCT
GAAGCTCGGCCTGCAGTACAACGGTCGGTTTTACCACCCCGCCGAGACCA
TCATGATAGTGGTGACGATGTGCCTCAGCAGGCCGCGGGCCTGGCCGAAG
GTGATGCAGAACAACACGATCTTCAGACACCGCTCCAGGGTGGAGATCTT
ACGAGCAAATCCTTGAAGCCGACCACCTCAGCCGCAGACGAGATGAAACG
TTGGCTATCAGATAGCGATGATGAAGAAAATATCGAAGCTACAAACAGCA
GCGGCGGACACGCCCCCGGAGGAGCGTTTGTCGAACCCTTCGCCTCCTCC
AGTGTACATCAAGCAGCTATTACCGCTGACCAACGGAGGCCACCAGCTGA
CGCTGTACCCGACAAAACGCAAAACGACATTTTCAGGCGTTCAAAACTAA
CCCTATCGGCGAAAGAGGAAATGGTCAATTGGCTATCGGAAAGTGATGAA
GAGAAAACAGGGACCAACAATATTTTAGAGTGGATGCAGCTTCGATCAAG
GAGAAGCAGGCATTCCGGCGGAAGGACTTCGCTGGACTCCTTGGCTTACT
CTAGCGAAGGCTCGCCGGCGTCCGGTCGTAGGAGCTGCAAAGGGAACGCA
AAATCTACGACCGTAGGCACAATTGCATCCCTACCAGCCCAGGTTCTAAA
TGGCGATCATCCTGCAGGCAACGACGCCAAAATCCCTGATTCGATGCGAG
CATGGCTAGATGACGATGCTAGCTCATCGAATGATGATACCAACAGGAGA
ATAACCTTGGATGTAGGTCTACCAGAAACACGCGGTGGACACTCCAACGA
AGAGCGCCGAAGGAATTTGCTATCGCCTGGGTGTGGCACTGTGACTCTTG
ATTCCCGGTTACACGACGCAACATGTAGGCCCGCAGAATTCGCTGATACA
GCTGCAGTAGCTGCGGCTGCTGCGATGAGTGAAGCAGCTTTCGCGGGGGA
GCCAGATTTAGATGCTACTCCCGCGCCGGATGGCCACGTTACGCCTGCCG
TCCCTGGCCAAAAAATTATTTTCCCTGTTGATATTGCACTATCATCACCA
CCAATAGCCGCAGCAGCAACGAGAGCAGCTGCTGAAGCTCGGCCTGCAGT
ACAACGGTCGGTTTTACCACCCCGCCGAGACCATCATGATAGTGGTGACG
ATGTGCCTCAGCAGGCCGCGGGCCTGGCCGAAGGTGATGCAGAACAACAC
GATCTTCAGACACCGCTCCAGGGTGGAGATCTTACGAGCAAATCCTTGAA
GCCGACCACCTCAGCCGCAGACGAGATGAAACGTTGGCTATCAGATAGCG
ATGATGAAGAAAATATCGAAGCTACAAACAGCAGCGGCGGACACGCCCCC
GGAGGAGCGTTTGTCGAACCCTTCGCCTCCTCCAGTGTACATCAAGCAGC
TATTACCGCTGACCAACGGAGGCCACCAGCTGACGCTGTACCCGACAAAA
CGCAAAACGACATTTTCAGGCGTTCAAAACTAACCCTATCGGCGAAAGAG
GAAATGGTCAATTGGCTATCGGAAAGTGATGAAGAGAAAACAGGGACCAA
CAATATTTTAGAGTGG back to top
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