prot_H-paniculata_contig7681.15689.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7681.15689.1
Unique Nameprot_H-paniculata_contig7681.15689.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: D7FP88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP88_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 9.610e-47
Identity = 103/218 (47.25%), Postives = 139/218 (63.76%), Query Frame = 0
Query:   11 VVAGLLVSVAQVDAFSMCPKAVR--SACQRPAAVAGHSSSPHVLAHVRQRSKAVSQGWLGVAAGRGRAKGGGALSMTETPGSVEEVTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKEFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDEKITESQ 226
            V+A LL+S A+++AFS+ P   R  S     ++ +G + +P     V  R  + +  WL   A R R +        ET   V  +T   ++ REFQLEELED+DV ETSVVL +DGS+ AG TNGP+P+   G WSFDG  F MD  R FDA+I PY V RV  GYVEEVL ATDTVI+TGDI M    +G+FKMIS+ +D++DS++HID+++ + Q
Sbjct:   10 VLAMLLLS-ARLEAFSVRPAVTRRGSKADSSSSRSGRALAPSA---VPDRGTSAAASWLWTGASR-RPRSTALRMGLET---VTGLTSTDMQTREFQLEELEDRDVAETSVVLNEDGSVTAGKTNGPIPIQVRGKWSFDGTAFRMDLHREFDASI-PYMVSRVMTGYVEEVLSATDTVIITGDIVMEEMEVGFFKMISSQTDLMDSIQHIDQQMAKIQ 218          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A835Z9V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 9.200e-35
Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 0
Query:   80 GALSMTETPGSVEEVTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGK-EFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDEKITE 224
            GALSM  T   ++      L+ REFQLEELEDK+   TSVVL  DGS+  G T+GPLP S+ G+WS D +  F M   R F+++ S Y V R + G +EEV+ AT T+IL G+I M+G+A+G+FKMIS PSDI D  + +DE++ E
Sbjct:   51 GALSMGVTAADID------LKFREFQLEELEDKETAATSVVLNGDGSVSFGATDGPLPKSTTGSWSMDDEGAFRMTVVREFESSYS-YEVTRTFTGVIEEVMEATKTIILAGEIYMDGDAVGFFKMISNPSDITDVTEKLDERVRE 189          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: H6WBB0_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB0_VAULI)

HSP 1 Score: 120 bits (301), Expect = 4.740e-31
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 0
Query:  102 REFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKEFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDE 220
            R+  LEELEDKD  ETS+VL +DGS+  G T+GP+PMS+ G WS + K F M+  R F++ I P+ V R + G +EE+L  T T+IL+GDI M+   +G+FKMIS  SDI D +K+ ++
Sbjct:   16 RQISLEELEDKDSCETSIVLNEDGSVSLGATSGPIPMSARGEWSMEEKNFEMEITREFES-IEPFEVTRKFSGEIEEILKETKTIILSGDILMDETPVGFFKMISNLSDIEDGVKNAEK 133          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S0ZDP4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDP4_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 5.940e-10
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 0
Query:  104 FQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWS-FDGKEFSMDFARTFDATIS-PYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISA 207
            FQL+E+ED+    T+VVL  DG+I  G T+GP+P+  EG+W  F+G +F ++  R F+      YTVQR Y G V + L   +   + G+I      +GYFK+ +A
Sbjct:   83 FQLDEMEDECETCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGDQFILEVDRVFEGEKGVEYTVQREYAGTVTKHLTYIE---IDGNIKAPFK-VGYFKLFTA 184          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S0ZDN7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDN7_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 7.000e-8
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  117 TSVVLEKDGSIRAGTTNGPLPMSSEGTWS-FDGKEFSMDFARTFDATIS-PYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISA 207
            T+VVL  DG+I  G T+GP+P+  EG+W  F+G +F ++  R F+      YTVQR Y G V + L   +   + G+I      +GYFK+ +A
Sbjct:    9 TAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGDQFILEVDRVFEGEKGVEYTVQREYAGTVTKHLTYIE---IDGNIKAPFK-VGYFKLFTA 97          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: B8BY48_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY48_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 1.400e-6
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 0
Query:   94 VTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSF------DGKEFSMDFARTFD----------ATISPYTVQRVYKGYVEEV---LPATDTVILTGDINMNGNAIGYFKMI-SAPSDILDSLKHI 218
            +++  LE +EFQLEELEDK+  ET + L  DGS+  G +NGP   S +G W        + K F M   RT++            IS Y V+R + G +E V   +  + T+    D +     +G+F +I +A S+ ++ +K +
Sbjct:   49 LSKADLEGKEFQLEELEDKEESETELWLNSDGSVTLGQSNGPRVASCKGDWHLIETATQEDKPFRMRLVRTYEYGTHSGSNQVGEIS-YDVKREFWGNIEMVGDSISVSGTMHGLDDRDQIDCDLGFFTIIDAAASEGIEGVKSV 192          
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S2PXC1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXC1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.770e-6
Identity = 49/145 (33.79%), Postives = 66/145 (45.52%), Query Frame = 0
Query:  102 REFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSF------DGKEFSMDFARTFDATIS------PYTVQRVYKGYVEEV-------------LPATDT----VILTGDINMNGNAIGYFKMISA-PSDILDSLK 216
            +EFQLEELEDK+  ET V L +DGS+  G +NGPL     G W          + F M   R F++  S       Y + R + G +E V             LP+ +T     +   D  M    IGYF MI A  SD ++ +K
Sbjct:   76 KEFQLEELEDKEECETEVWLNEDGSVSLGASNGPLVRDYAGEWHLLETAGVGYQPFRMRLTRRFESPGSGRIGDIQYDLTREFWGSIEMVGESICVNGKIHGALPSAETNQYAQMYHDDQAMQETEIGYFTMIDAVASDGIEGVK 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FP88_ECTSI9.610e-4747.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9V2_9STRA9.200e-3550.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBB0_VAULI4.740e-3149.58Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A7S0ZDP4_9RHOD5.940e-1039.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZDN7_9RHOD7.000e-838.71Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
B8BY48_THAPS1.400e-631.72Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PXC1_9STRA2.770e-633.79Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..227
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.818
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7681contigH-paniculata_contig7681:4134..10517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7681.15689.1mRNA_H-paniculata_contig7681.15689.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7681 3759..11216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7681.15689.1 ID=prot_H-paniculata_contig7681.15689.1|Name=mRNA_H-paniculata_contig7681.15689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MLFNNILIGVVVAGLLVSVAQVDAFSMCPKAVRSACQRPAAVAGHSSSPH
VLAHVRQRSKAVSQGWLGVAAGRGRAKGGGALSMTETPGSVEEVTQVHLE
EREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKE
FSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIG
YFKMISAPSDILDSLKHIDEKITESQK*
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