mRNA_H-paniculata_contig7681.15689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7681.15689.1
Unique NamemRNA_H-paniculata_contig7681.15689.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: D7FP88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP88_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 9.100e-44
Identity = 106/228 (46.49%), Postives = 143/228 (62.72%), Query Frame = 1 
Query:  142 MLFNNILIGVVVAGLLVSVAQVDAFSMCPKAVR--SACQRPAAVAGHSSSPHVLAHVRQRSKAVSQGWLGVAAGRGRAKGGGALSMTETPGSVEEVTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKEFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDEKITESQ 819
            M     +IGV+ A LL+S A+++AFS+ P   R  S     ++ +G + +P     V  R  + +  WL   A R R +        ET   V  +T   ++ REFQLEELED+DV ETSVVL +DGS+ AG TNGP+P+   G WSFDG  F MD  R FDA+I PY V RV  GYVEEVL ATDTVI+TGDI M    +G+FKMIS+ +D++DS++HID+++ + Q
Sbjct:    1 MFPTRSMIGVL-AMLLLS-ARLEAFSVRPAVTRRGSKADSSSSRSGRALAPSA---VPDRGTSAAASWLWTGASR-RPRSTALRMGLET---VTGLTSTDMQTREFQLEELEDRDVAETSVVLNEDGSVTAGKTNGPIPIQVRGKWSFDGTAFRMDLHREFDASI-PYMVSRVMTGYVEEVLSATDTVIITGDIVMEEMEVGFFKMISSQTDLMDSIQHIDQQMAKIQ 218
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A835Z9V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.540e-32
Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 1 
Query:  379 GALSMTETPGSVEEVTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGK-EFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDEKITE 813
            GALSM  T   ++      L+ REFQLEELEDK+   TSVVL  DGS+  G T+GPLP S+ G+WS D +  F M   R F+++ S Y V R + G +EEV+ AT T+IL G+I M+G+A+G+FKMIS PSDI D  + +DE++ E
Sbjct:   51 GALSMGVTAADID------LKFREFQLEELEDKETAATSVVLNGDGSVSFGATDGPLPKSTTGSWSMDDEGAFRMTVVREFESSYS-YEVTRTFTGVIEEVMEATKTIILAGEIYMDGDAVGFFKMISNPSDITDVTEKLDERVRE 189
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: H6WBB0_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB0_VAULI)

HSP 1 Score: 120 bits (301), Expect = 1.030e-28
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 1 
Query:  445 REFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKEFSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISAPSDILDSLKHIDE 801
            R+  LEELEDKD  ETS+VL +DGS+  G T+GP+PMS+ G WS + K F M+  R F++ I P+ V R + G +EE+L  T T+IL+GDI M+   +G+FKMIS  SDI D +K+ ++
Sbjct:   16 RQISLEELEDKDSCETSIVLNEDGSVSLGATSGPIPMSARGEWSMEEKNFEMEITREFES-IEPFEVTRKFSGEIEEILKETKTIILSGDILMDETPVGFFKMISNLSDIEDGVKNAEK 133
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S0ZDP4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDP4_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 4.430e-9
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 1 
Query:  451 FQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWS-FDGKEFSMDFARTFDATIS-PYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISA 762
            FQL+E+ED+    T+VVL  DG+I  G T+GP+P+  EG+W  F+G +F ++  R F+      YTVQR Y G V + L   +   + G+I      +GYFK+ +A
Sbjct:   83 FQLDEMEDECETCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGDQFILEVDRVFEGEKGVEYTVQREYAGTVTKHLTYIE---IDGNIKAPFK-VGYFKLFTA 184
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S0ZDN7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDN7_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 3.090e-7
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1 
Query:  490 TSVVLEKDGSIRAGTTNGPLPMSSEGTWS-FDGKEFSMDFARTFDATIS-PYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIGYFKMISA 762
            T+VVL  DG+I  G T+GP+P+  EG+W  F+G +F ++  R F+      YTVQR Y G V + L   +   + G+I      +GYFK+ +A
Sbjct:    9 TAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGDQFILEVDRVFEGEKGVEYTVQREYAGTVTKHLTYIE---IDGNIKAPFK-VGYFKLFTA 97
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: B8BY48_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY48_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 6.880e-6
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 1 
Query:  421 VTQVHLEEREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSF------DGKEFSMDFARTFD----------ATISPYTVQRVYKGYVEEV---LPATDTVILTGDINMNGNAIGYFKMI-SAPSDILDSLKHI 795
            +++  LE +EFQLEELEDK+  ET + L  DGS+  G +NGP   S +G W        + K F M   RT++            IS Y V+R + G +E V   +  + T+    D +     +G+F +I +A S+ ++ +K +
Sbjct:   49 LSKADLEGKEFQLEELEDKEESETELWLNSDGSVTLGQSNGPRVASCKGDWHLIETATQEDKPFRMRLVRTYEYGTHSGSNQVGEIS-YDVKREFWGNIEMVGDSISVSGTMHGLDDRDQIDCDLGFFTIIDAAASEGIEGVKSV 192
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BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Match: A0A7S2PXC1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PXC1_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.450e-5
Identity = 49/145 (33.79%), Postives = 66/145 (45.52%), Query Frame = 1 
Query:  445 REFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSF------DGKEFSMDFARTFDATIS------PYTVQRVYKGYVEEV-------------LPATDT----VILTGDINMNGNAIGYFKMISA-PSDILDSLK 789
            +EFQLEELEDK+  ET V L +DGS+  G +NGPL     G W          + F M   R F++  S       Y + R + G +E V             LP+ +T     +   D  M    IGYF MI A  SD ++ +K
Sbjct:   76 KEFQLEELEDKEECETEVWLNEDGSVSLGASNGPLVRDYAGEWHLLETAGVGYQPFRMRLTRRFESPGSGRIGDIQYDLTREFWGSIEMVGESICVNGKIHGALPSAETNQYAQMYHDDQAMQETEIGYFTMIDAVASDGIEGVK 220
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7681.15689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FP88_ECTSI9.100e-4446.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9V2_9STRA3.540e-3250.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBB0_VAULI1.030e-2849.58Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A7S0ZDP4_9RHOD4.430e-939.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZDN7_9RHOD3.090e-738.71Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
B8BY48_THAPS6.880e-631.72Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PXC1_9STRA1.450e-533.79Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7681contigH-paniculata_contig7681:3759..11216 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_000370.1
Exons5
Model size1524
Cds size684
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930950.8644104-UTR-H-paniculata_contig7681:3758..38961622930950.8644104-UTR-H-paniculata_contig7681:3758..3896Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 3759..3896 +
1691481524.6287804-UTR-H-paniculata_contig7681:3758..38961691481524.6287804-UTR-H-paniculata_contig7681:3758..3896Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 3759..3896 +
1622930950.8804429-UTR-H-paniculata_contig7681:4130..41331622930950.8804429-UTR-H-paniculata_contig7681:4130..4133Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 4131..4133 +
1691481524.6384313-UTR-H-paniculata_contig7681:4130..41331691481524.6384313-UTR-H-paniculata_contig7681:4130..4133Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 4131..4133 +
1622930950.9700036-UTR-H-paniculata_contig7681:10517..112161622930950.9700036-UTR-H-paniculata_contig7681:10517..11216Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 10518..11216 +
1691481524.6870093-UTR-H-paniculata_contig7681:10517..112161691481524.6870093-UTR-H-paniculata_contig7681:10517..11216Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7681 10518..11216 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930950.8963456-CDS-H-paniculata_contig7681:4133..44481622930950.8963456-CDS-H-paniculata_contig7681:4133..4448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 4134..4448 +
1691481524.6480267-CDS-H-paniculata_contig7681:4133..44481691481524.6480267-CDS-H-paniculata_contig7681:4133..4448Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 4134..4448 +
1622930950.9122353-CDS-H-paniculata_contig7681:6906..70501622930950.9122353-CDS-H-paniculata_contig7681:6906..7050Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 6907..7050 +
1691481524.6582162-CDS-H-paniculata_contig7681:6906..70501691481524.6582162-CDS-H-paniculata_contig7681:6906..7050Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 6907..7050 +
1622930950.9311197-CDS-H-paniculata_contig7681:8003..81381622930950.9311197-CDS-H-paniculata_contig7681:8003..8138Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 8004..8138 +
1691481524.667584-CDS-H-paniculata_contig7681:8003..81381691481524.667584-CDS-H-paniculata_contig7681:8003..8138Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 8004..8138 +
1622930950.950051-CDS-H-paniculata_contig7681:10427..105171622930950.950051-CDS-H-paniculata_contig7681:10427..10517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 10428..10517 +
1691481524.6775386-CDS-H-paniculata_contig7681:10427..105171691481524.6775386-CDS-H-paniculata_contig7681:10427..10517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7681 10428..10517 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7681.15689.1prot_H-paniculata_contig7681.15689.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7681 4134..10517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7681.15689.1

>prot_H-paniculata_contig7681.15689.1 ID=prot_H-paniculata_contig7681.15689.1|Name=mRNA_H-paniculata_contig7681.15689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MLFNNILIGVVVAGLLVSVAQVDAFSMCPKAVRSACQRPAAVAGHSSSPH
VLAHVRQRSKAVSQGWLGVAAGRGRAKGGGALSMTETPGSVEEVTQVHLE
EREFQLEELEDKDVMETSVVLEKDGSIRAGTTNGPLPMSSEGTWSFDGKE
FSMDFARTFDATISPYTVQRVYKGYVEEVLPATDTVILTGDINMNGNAIG
YFKMISAPSDILDSLKHIDEKITESQK*
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mRNA from alignment at H-paniculata_contig7681:3759..11216+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7681.15689.1 ID=mRNA_H-paniculata_contig7681.15689.1|Name=mRNA_H-paniculata_contig7681.15689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7458bp|location=Sequence derived from alignment at H-paniculata_contig7681:3759..11216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCGCTGTTGGTAGTCTATTATAGTTGTGTAGTAATCAGCTTCATCATA
AGGGTAGGTGTTCCCGCACTTTAGAGTCATGAACATGAGCGATGCAGCAG
CGTAGTGGCCTGGTCCTCGCTCACGCAGCAAAATATCTGTAAGCTATTCG
CAGGTCAGCTATTCGAAGCACACGCCAATCCTTCTCTAACTGAACCGACT
TGGAAAATAAAATGACAACAAGTGACCTTTTCCTTCAACCATAACTTTGA
CATTTTGACCGAGAAAACACGTGACAATGTTTCCATAACCTCTCCTTCCT
TTAGACGTGTGCGTGCTACTCACCCTCACGCCCCAGACATACACGCACGT
ACGCATATACGTGATACATCAGGTCATGCTTTTCAACAATATCCTGATCG
GAGTAGTTGTGGCAGGGCTTCTCGTGAGCGTGGCACAGGTCGATGCCTTT
TCCATGTGCCCCAAGGCGGTGCGTTCTGCGTGTCAACGACCAGCAGCAGT
AGCGGGGCATTCTTCGTCTCCGCATGTGCTTGCGCATGTGAGGCAGCGCT
CGAAAGCAGTGTCGCAGGGCTGGTTGGGGGTGGCGGCGGGCAGGGGTCGA
GCGAAAGGCGGTGGCGCTCTGAGCATGACGGAAACTCCTGGGTCTGTGGA
AGAGGTGACGCAGGTTCATCTCGAAGAACGCGAGTTTCAGGTAACGGCGT
TCACATGGTAGATGATGTACATATATGTAATGTATTTCATGTGGATACAG
CAGAAATGTTGAGGAGGGGTCCAGGGGTGCGTGTCCTTTTGAATATTGTA
CCTCGTTGCTTGCCGAGTATGCGGCTGCTGTTACTATTCGCATGTGTGCG
TGTGTGTTCATATTTGTTCATGTGTTTGTGCAAGTTGCTGTGCTTGGTTA
CAGTTGAAGATGCATGCTTCAGTGTTCAGCTACCAAGTATCTGGCTTGAA
AGTTCACTGTGGATTTATGTTGATACGGTGGGCCGGATGGGTCGAGGTCT
ACATCTGCTGCACTTTCTTTGTGCTTCCTACTATGTGCGAATCTTGCTTC
TCCTATGAAAGATGCGTTTAACACACAGATGCCAGCAGTGTACCGTTTCA
GCAACTATCGCGAGAGAGGGGGGGAGGACGAATATCGATGCAAAGTTGGC
AGCATACCGTACTTGACAAATGATACGATTGGAAATATATTGTGACCATC
CATAGACCAACAGTACAGTAGTAGACACCCGTTTGGGAACACATGTTACC
TGCTGAATGCATGTCGATACCACACTGTACAATTGTATTGTCGAGCGGTA
TTGTTTATGTACGTTCGGTTCATAGAAAAACCTCACCTACGTGAACACAT
TCATGCTGAAGTGCAAGCCCGGAGAAACCCCACCGTGTGCACCAGGGGGC
GTCTTCTGCACTAGGCTGAATAGTCCTCGTACATGATTCGTTATTAGTAT
AGGCCAGCGTCGGGTGGGTAAAATACAGATCATGTTTTTTTTTTTATTAT
TATTACATGCGGTCATGGCCCCGTTATACGGCGGTGCTCTGACAGACGAG
TCTGACCGCCGTAACCCAGTCCACGCCTTATACAGGTATAAACAGGCATG
AGGCGTTTAGCTGTGAAGCCTCTTTATTGTGGTGGCGGGCGCACTGTAGC
GAAATGTATCGCTCTAGATTGCTGCGCCGCACCATACAAAAACCTTCGGC
TAACCCCGCTCGTGCTCTGTGTTCCGGGCCAAAAAAAGGAGGATCCAAGC
CGAGGAAAGTATAAAAAGATAGTACACGTGAACGTTCTGGAGTGCGGTCT
GGAAGTTTCTCCAGTTTTCATTTTGCATACCGCATGGTTCATGGCAGCTG
AGCAACTAACTCTGCGTGTGGTTGCGACCCAAAGCGTCTTCTAGGTTCTT
AGATAAACTAGTAGACTTACTCGACTTGTCAAAGCCAAGGTCATTTGGAT
CACTCAAGTGCAGTAACTGCGCTATTGAAGGAAACGATCTCTATATAATG
CGGTGACCACATTATGGTGGGTCGGAGTCGTGACAAGCGATTTTTTGGCC
GCCATATTGGTGGGGCCCGCCTTGTTGAGTACCGCCTTATAGAGGAGATA
CACATTACTGAGTATCGGACATATCAGCCAAAATTTGGATGGACAAAATA
CAGGTTGGTATACGATGTTTTTCCATCCGATAACCCATATAACTGGTGTA
AAAAAAACGGTCAAGAAACCAAAAAACTGTTGGAAACTCATTCGAAAATC
GTGGCGAATATATAGGTGTATTTGAGTAAATTACACAAGCATTCACCCAG
CCAATCCAAAGTAAGGACTACAAATAGACCGCTCGTATCCAATCCTTAGT
CCCTTGGGAAGTTCTGATCCCTGTTCCGATTTGGTAATGAGAAGAAAAAA
AAAAAGTGTTTGACTGTTCTCACTCCGTACTAAATCCAACATAAACGTCC
CCAAACAGAAAAAAAAAAAAAAAAAAAAAATTGCACCTGCAGATGCAGAG
ACCCGCTGTCTAGAGCTGGTGTAGCACTGTGTCGACATAGTCATCATTGT
CCACAGTTTGTCGTTCGCAAATCTGTCTTTTGGCCATTGCGGAGCTCAGT
CCCTGGAGGCTTTGAATGCCTCTTCGCGATAAAGATCTCAAAACACCAGA
TCGGGGTCGTAATACGACGCCACCCCCCTCCTAGTGATTTAGTTTTGCTG
ATTAAGTGGTGTATATATGTATACAAATGCAGATTTAATTCAGCCTAATA
ATCTCAACATGGATACAATGTAGTTATAATATGAGGTTCAGATTTATAGT
TCAAGTGACTGGCAAGGTAATTTTACTACAGTAATGAGAATTTCCGTTAG
CCAAAGTGAAGGCTTGCTTTCAATCCTCATGGTCTCAAGTCGTCCGTATG
AGGACTGTTTTTAATGTTTTCATCCACAAAGGCACACCTGAGAGTGATCT
GCTGATTTTCTCTTGTGATGATTTTTGTAGAGTCCATGTCGTGTGTGATC
GTCGAAGAGGGGTACGGGTATATATGTAAGACCTTCGGAAAATATCATGT
GAGCATAATACTCTTGACCCCCCCCTCCGTCCCTTCTGAACTCTAACGTC
ATTAACCATCGTCCACATTCTTTCTGGATCATGGCACATCTGTGGCAGTT
GGAGGAGCTCGAGGACAAAGATGTGATGGAAACCTCCGTTGTGCTGGAGA
AGGACGGAAGCATAAGAGCAGGCACCACGAACGGCCCCCTGCCCATGTCG
TCTGAGGGAACATGGTCGTTCGATGGGAAAGAGTTTAGTATGGTGAGGGG
CTCAGGGAGAAAAGAAAAGAGCCGTGTCATGGTCTATGCTGAAATATTCA
TCGCTCGTAAAATGTTCTTCCTGCAAATGCTCGCACTGTATCAGCTATAA
TGGGTCTCGACACTGCAGACACAGCAGGGCTCTTGGAGGTGTGCCTTGCG
TATGATGCCTGGAGGAGCAGCAAATTGCGTGTCTAGATGTTGCAGATTCG
GTCTGACTCGTGGCTGTCAAAGAAATACTTGATATTTACAGAATGCTCAT
AAGCATGTACTATTTTCCAGCATGCTTGAGCTGTGATCGAGTAAGTGATC
CTTCAATGAGCAAAAGAGCGTTGGAGGCAGTTCGGAACAAGAAAAAAAAT
GGCCGACAAGGCTTCTTGTATTTCATGTGTTTATTTAACTTTTCGGAATT
ATTTTCCTTTTTTTTTGTTCTGTAGGGCTCTTCGTTTTTGTTGCTTCATG
TGTTACGGTATAATATCGCAGGTCTACTGATTCGCCATTTACCCCTTCGA
CCGCGGGTCTGAGGGATCGGGCTAATGTATGAACACTACTGTTACTAGTA
CTATTACTACTACTAATAAGTCGGCCTATGCTGCAGCCAGTCAGTCAGTC
ACTGTGCGGAGAAATGTGCCAAGTTCCTGTCTGTGCTGTATTCATGTACT
GTATATGCTGAACTACATCGCCGTCGGAACAGAGGCAGCCCTTTATCCCT
TGTCTTGATGCCATCGGTCTTGTTTTACTCTGCTTTTTAGATAAGGAATA
TTTGGGCGATAACCGGCGCCTGAAAGCTAAGTAGAACACTCATTTTGAGT
ATTAAATTGGTCGCTCTCTCTCTCGTGCAGGGTTCGATTGAACGGGATGT
CTTGCTTGCCGTCGGCCCTTGTGTTTCTCATCTCTATTGTTCTCTCGTGA
CCCATGGGTATTGTGTTTTTATACGTACCTTTCTTTTGACTGCAGGATTT
TGCGCGGACATTCGACGCAACGATCAGTCCTTACACGGTGCAACGTGTTT
ACAAGGGGTACGTGGAGGAGGTGCTTCCTGCCACCGACACTGTTATCCTA
ACCGGCGACATCAACATGAACGGCAACGCGGTACGTTCTGTTATTTTCCA
ACAGTTTCTCACAGGTTACATATAACACTATTAACATGACCACAGGGGTG
ATTGGACTATTTTCCAGTCCGCTTTTTCTGAATTTTTTTCTAGCATGAAG
ATTTACCCCTTTTTTGTCGAGTCTTCGGTACATCAGTTGATGGACACGCG
CAGTCCGCAGCTGTTGGAATGTAGTACCTCGGTTCTTGCCTTGTATTTTC
GCACCTACGGAGCAGCCGTCCCACTCGACGTCAACTGTGGATTTGACAGT
GGTCATCTATTGCGAGTATCATGAGCAATTTTGTCTATCTATCGACCTAT
CTAATTATGGATCTTGGCGAGATCTAACCAGCGGTATAACTTTGGATGTC
ATGAGTAGGGAAACTTGTCTAAAAAGTCTAATTCGAAGAGCGGTTTCGAA
ACCCGGGACGGGGGGCTACAGCATGACCTGTGGTATCGATTGTGTTTGCT
GCTTATGGCGAATCTTAACGGTTGGTGTTTTCTTCTGATGTGTACGTTCG
AAGGTGCAAGGAAGGCTTCACCCCCCGGGCGTCTGAGTACGATTTCTTTG
GAGCGTTCATGACGAAAATCAAGGAGTAATCGTTTGAGTTTTCGAATGTC
CGGGCACACACGAAAAACCTCAAGTGTTGACCCTTGTTTAATACAGGGGC
GCATTGTTAATAGGACCAATTTATTGCTCTTTGGCCCCATGTGCCCCCCA
TTCGACTTGGTGTATCTCCACAACCAACCACGGGGTTAAATGGAAAACCG
AAACGTAAGTGCACACCGCATGATTGGGACGGTTCCATTCATACCGGTTC
CGTAGGTTGGTTCGGTGGAATGGGTTCAGACTTCCGCCTCTCGGAAGAGC
AACAATTTGGAAACATATTTGTAATGTGCCTCCTTAACATAGTAGTCGTT
TTGAGAACACGATGCTCCCGGGAGAGACTGGTTCTCGAGGGTACACCGCC
TGCTCTATGCCGGTCAGTTCTAGGTCTAGGGATGTAGTGCGGAGCAAGCA
CTTGGATTTTGTTCTCTCGGAGATGGGTGGTGTCGGACACAGCTAGAAAG
CTGTTCCGAGAAAGGGACAGAACCCCGTTGGTCGTTGTGTAGGGGGCAAG
GGTTCAGGAACGTCACGAACGTGCTCTCCACAGTTTCACTGATTATTATT
CGGAGCAACTATTATTAGTCATGTAGGTGGTCTAGGGTACATAAAACGTG
AATCCACATGCATAAACTTGAAGCTAACATTTTTTTCCTCCTGGTCGTGG
ATTTACATTCGTCCCGGGGGTGGAAACTTGACGGTTACAGGTGCGTGGTG
TTGCTTACTTTGTGTGAGATTTGGCTCAGGGATATATTTTACGTTTCTGT
GGTACAATGTTCACCATAACGAAAGTTTCTGTGAGTATGATGGGTAGCGT
GTCATTATTCCTCGGAGAGCTATTGTCATTTTCCACCGGTCCCAATTTCG
GCATACTGTGAAGTTCCTTCTTTGGTCCATGAGAGATATAGCCCCCACAA
GCGAATCAAAGAGACACTACCTATAGCACTTTCTTATTGTGGGTTTCAGC
TAAGGGCTAACCAGCTTCATCAGTGGCTAATTGCCAAAACCCCCTTGGTC
ATAAAGGCCGCTAAACTCCGTAGTCGTATTTCTGAATGCGTGTACTCTGC
GCTGTCGACTACATAGAACGTCATATTGGTATTGAACAAGTAGATTCCAG
GACAAGATATATTCGAGGTGTGAGACCTTTAGGGAGTCCGGGGAGGGCAA
TCGAAATCGTCACCCCTGCGATTTTACTAAAAATATGTTTTCCTAGCCGT
ATTTCGATACTAGTTATTGTTGTGATGTTACGTGCAGATTTACATCCTAG
TGGTGAATCAACATCCGATTAGACATGATTTTCGGAGTCAACTAGCGTTT
TTTCATGTAACCTGGCTTCCCGTGAGAGTACAGCAGAATGGTTTATACTG
ACGGAGAAGGAAATGAGGAAAAAACAGGCTCGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGATATTTTGCCCAAATCAAACTATTGATACCTCGTATTA
GAATATGTAATATACTATGTACGGCACATGAGCAAGATGCTCTTTTTTCC
TGGAAAAAGAGAATATGGTTCGCTTATCACGTGCGCCAGCAATCGTCAAG
ATTATGTACCCATCTAAACACATAAAAAAAAAAAAAAACCATCAGTATTT
TTTCCCCGATTGTCTTTTCTGCAAATTGTGATGTTCTGCTTGTTCCACAT
GTTCGTATCCGTTCGGCAGATTGGTTATTTCAAGATGATCTCCGCTCCGT
CGGATATCTTGGATAGCCTCAAGCACATCGACGAGAAGATCACGGAATCT
CAAAAGTGAAAATAGATATGTGGCGGATTGATACATCTAATTGCGGCGGT
TCTTCCGCAAGAACGCAGATAAGGGAACAAGAGGCGAGGCGGATCGACGT
CTGACTTCTCGAGCGGAATTATTTGCACCTCAGTAGCCGGCGGAATTAAT
TTTGGTTCTTTCAGTCAAACTGCAAAAAACAGAACAAGCGGCCCTTTTGG
GCTCGAATATTTTTTTGTTCGTCAACAACAGTACTTTTTTTTTCAGTGCG
ATTCATCATGTGGCTGTTTGTCTGTGTTAGCTGTGGACTCTCCATCTCAG
AATGATGCCAAAATCGTGGAATGACGTCGTACGTCGGCCCGTAATTTTTC
CACAAGATCATACCAATCGCTTCAATAACATTGACCAGTAGAATATTTGC
GGGCAATTTCCACTTGTGATCGATCGTTGTATCTTTTACGGTGCAGCATT
TCGACGTACAAGAAAGGGTATGCTTCCTTTTCTGTCTCGCCGTGATAAGA
TTGAGCGTGTGTAGTGTTGTTGCAGTCATGTGATTGATGGAGAGCGTTTT
TTCGCCGCTGCAATGGTTGTTCCTTCTTATTTCGCAGCATTTGTGCGAGT
ATTTTTTTTTTTAACCCCGGGAAGGTCGAGGCAAAACCCTTTCCGCTGCT
TCCACTCTTCGGAAGATTACTGAGTGTCTGCATTTCCTGTTTTACTTGGA
TCAGAGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig7681:3759..11216+

>mRNA_H-paniculata_contig7681.15689.1 ID=mRNA_H-paniculata_contig7681.15689.1|Name=mRNA_H-paniculata_contig7681.15689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig7681:3759..11216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTTTCAACAATATCCTGATCGGAGTAGTTGTGGCAGGGCTTCTCGT
GAGCGTGGCACAGGTCGATGCCTTTTCCATGTGCCCCAAGGCGGTGCGTT
CTGCGTGTCAACGACCAGCAGCAGTAGCGGGGCATTCTTCGTCTCCGCAT
GTGCTTGCGCATGTGAGGCAGCGCTCGAAAGCAGTGTCGCAGGGCTGGTT
GGGGGTGGCGGCGGGCAGGGGTCGAGCGAAAGGCGGTGGCGCTCTGAGCA
TGACGGAAACTCCTGGGTCTGTGGAAGAGGTGACGCAGGTTCATCTCGAA
GAACGCGAGTTTCAGATGCTTTTCAACAATATCCTGATCGGAGTAGTTGT
GGCAGGGCTTCTCGTGAGCGTGGCACAGGTCGATGCCTTTTCCATGTGCC
CCAAGGCGGTGCGTTCTGCGTGTCAACGACCAGCAGCAGTAGCGGGGCAT
TCTTCGTCTCCGCATGTGCTTGCGCATGTGAGGCAGCGCTCGAAAGCAGT
GTCGCAGGGCTGGTTGGGGGTGGCGGCGGGCAGGGGTCGAGCGAAAGGCG
GTGGCGCTCTGAGCATGACGGAAACTCCTGGGTCTGTGGAAGAGGTGACG
CAGGTTCATCTCGAAGAACGCGAGTTTCAGTTGGAGGAGCTCGAGGACAA
AGATGTGATGGAAACCTCCGTTGTGCTGGAGAAGGACGGAAGCATAAGAG
CAGGCACCACGAACGGCCCCCTGCCCATGTCGTCTGAGGGAACATGGTCG
TTCGATGGGAAAGAGTTTAGTATGTTGGAGGAGCTCGAGGACAAAGATGT
GATGGAAACCTCCGTTGTGCTGGAGAAGGACGGAAGCATAAGAGCAGGCA
CCACGAACGGCCCCCTGCCCATGTCGTCTGAGGGAACATGGTCGTTCGAT
GGGAAAGAGTTTAGTATGGATTTTGCGCGGACATTCGACGCAACGATCAG
TCCTTACACGGTGCAACGTGTTTACAAGGGGTACGTGGAGGAGGTGCTTC
CTGCCACCGACACTGTTATCCTAACCGGCGACATCAACATGAACGGCAAC
GCGGATTTTGCGCGGACATTCGACGCAACGATCAGTCCTTACACGGTGCA
ACGTGTTTACAAGGGGTACGTGGAGGAGGTGCTTCCTGCCACCGACACTG
TTATCCTAACCGGCGACATCAACATGAACGGCAACGCGATTGGTTATTTC
AAGATGATCTCCGCTCCGTCGGATATCTTGGATAGCCTCAAGCACATCGA
CGAGAAGATCACGGAATCTCAAAAGTGAATTGGTTATTTCAAGATGATCT
CCGCTCCGTCGGATATCTTGGATAGCCTCAAGCACATCGACGAGAAGATC
ACGGAATCTCAAAAGTGA
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