prot_H-paniculata_contig768.15687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig768.15687.1
Unique Nameprot_H-paniculata_contig768.15687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
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BLAST of mRNA_H-paniculata_contig768.15687.1 vs. uniprot
Match: A0A6H5KRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF9_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.300e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    2 RLPQSDARCVAQEVLLYLIRLLEELELDAAYAGLAPGQLWGCKV 45
            RLP  DAR VA+EVLLYL+RLLE+LELDA  AGL PGQLWGCK 
Sbjct:  228 RLPVGDARRVAEEVLLYLVRLLEDLELDAGTAGLKPGQLWGCKA 271
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BLAST of mRNA_H-paniculata_contig768.15687.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.310e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    2 RLPQSDARCVAQEVLLYLIRLLEELELDAAYAGLAPGQLWGCKV 45
            RLP  DAR VA+EVLLYL+RLLE+LELDA  AGL PGQLWGCK 
Sbjct: 1297 RLPAGDARRVAEEVLLYLVRLLEDLELDAGAAGLKPGQLWGCKA 1340
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig768.15687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRF9_9PHAE2.300e-1377.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSU3_ECTSI2.310e-1377.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig768contigH-paniculata_contig768:29937..31667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig768.15687.1mRNA_H-paniculata_contig768.15687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig768 29937..31669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig768.15687.1 ID=prot_H-paniculata_contig768.15687.1|Name=mRNA_H-paniculata_contig768.15687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
RRLPQSDARCVAQEVLLYLIRLLEELELDAAYAGLAPGQLWGCKVSPDDA
PDACNAGTDTID
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