prot_H-paniculata_contig768.15685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig768.15685.1
Unique Nameprot_H-paniculata_contig768.15685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length332
Homology
BLAST of mRNA_H-paniculata_contig768.15685.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.370e-80
Identity = 181/359 (50.42%), Postives = 216/359 (60.17%), Query Frame = 0
Query:    2 ALKRLRAGISVTVADGSSRGQ------NPTSAAVAAMRADACLQSLRD-ESRVYLVANGGLSVWRRGRN---GRGLRSRVVKKAASTVEEGKRQGNEGSAGTAIT-----------------KLEKIDGVCAGVLFGGGGASSVELSADGRWVVVVDDRGGLSWWTTPSLIRLARWTWPTGT-FCVTDVVILVGTDSGIDNSRANTRRPPPASAGSYVGGGAKGGAGVSGDPRPCVACLSAAGELRVLRLGPMGVEELHRSQDMVGGGMLTVPSTFRHQFLLVSSNPASGRANIHIGKEAVPRHRLQALLSRGDFNRALELARAHGMDETEVHAARFLSLLRDTGTPPT-SGSKSGEEA 331
            ALK+LRAGI V+VAD S   +      +P  ++   +   ACLQ+LR   SRV+LV+ GG+SVW RG     GR  R       A+ VEE + +G  G AG                     KL K+DGV AG LFGGGGA S ELSADGRW++ VDDRGGLSWW + SL+RL RW+WP G  F VTD V+L        +     R P   S  +   G          D RPC+AC+S  GE+RVLRLG  G EELHR     G GMLTVPS  RHQFLLV+S+PAS  A  H+ KEAVPRHRLQALL+RGDF+RALELARA+ MDET VHAAR L+LLR  G   + SG   G+ A
Sbjct:  284 ALKKLRAGIRVSVADASGDEEPLPCPSSPEPSSRDKLPRTACLQTLRGGRSRVFLVSRGGVSVWARGPGCSVGRHPRRGGGGIGAAAVEEWEERG--GGAGEDXXXXXXXXXXXXXXXXXAGKLVKVDGVPAGELFGGGGAISAELSADGRWIIAVDDRGGLSWWNSRSLLRLGRWSWPHGAPFHVTDFVVLASNLVAAGDGGGIGRAPVGGSGNNNSHGE---------DRRPCLACVSREGEVRVLRLGAGGAEELHRVPPAAGAGMLTVPSPSRHQFLLVTSDPASRTAGFHLVKEAVPRHRLQALLARGDFDRALELARANCMDETGVHAARLLALLRGAGVAASASGDGKGDAA 631          
BLAST of mRNA_H-paniculata_contig768.15685.1 vs. uniprot
Match: A0A6H5KQ38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ38_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.830e-71
Identity = 171/355 (48.17%), Postives = 210/355 (59.15%), Query Frame = 0
Query:    2 ALKRLRAGISVTVADGSSRGQN-PTSAAVAAMRAD-----ACLQSLRD-ESRVYLVANGGLSVWRRG------RNGRGLRSRVVKKAASTVEE-----GKRQGNEGSAGTA--IT-KLEKIDGVCAGVLFGGGGASSVELSADGRWVVVVDDRGGLSWWTTPSLIRLARWTWPTGT-FCVTDVVILVGT--DSGIDNSRANTRRPPPASAGSYVGGGAKGGAGVSGDPRPCVACLSAAGELRVLRLGPMGVEELHRSQDMVGGGMLTVPSTFRHQFLLVSSNPASGRANIHIGKEAVPRHRLQALLSRGDFNRALELARAHGMDETEVHAARFLSLLRDTG-TPPTSGSKSGEEA 331
            ALKRLRAGI V+VAD S   +  P  +++     D     ACLQ+LR   SRVYLV+ GG+SVW RG      R+ R     +   AA   EE     G+ +G++G A +A  +T KL K+DGV AG LFG GGA S ELSADGRW++VVDDRGGLSWW + SL+RL RW+WP G  F VT+ V+L     D+G         R P   +G+    G         D RPC+AC+S  GE+RVLRLG  G EELHR     G GMLTVPS  RHQFLLV+     G + +H            ALL+ GDF+RALELARA+ MDET+VHAAR L+LLR  G     SG   G+ A
Sbjct:  170 ALKRLRAGIRVSVADASGDEEPFPCPSSLEPSSRDKLPRTACLQTLRGGRSRVYLVSRGGVSVWARGPGRSVSRHSRRCGGEIGAAAAKEGEERGGGAGEERGSDGDAPSAPGVTGKLVKVDGVPAGELFGEGGAISAELSADGRWIIVVDDRGGLSWWNSRSLLRLGRWSWPHGAPFHVTNFVVLASNLVDAG---DGGGIGRAPVGGSGNNNSHGE--------DRRPCLACISREGEVRVLRLGAGGAEELHRMPPAAGAGMLTVPSPSRHQFLLVTRCVCGGYSAVHA-----------ALLAHGDFDRALELARANSMDETDVHAARLLALLRGAGGAASASGDGKGDAA 502          
BLAST of mRNA_H-paniculata_contig768.15685.1 vs. uniprot
Match: A0A835ZDW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.660e-18
Identity = 97/319 (30.41%), Postives = 131/319 (41.07%), Query Frame = 0
Query:    3 LKRLRAGISVTVADGSSRGQNPTSAAVAAMRADACLQSLRDESRVYLVANGGLSVWRRGRNG-RGLRSRVVKKAASTVEEGKRQGNEGSAGTAITKLEKIDGVCAGVLFGGGGASSVELSADGRWVVVVDDRGGLSWWTTPSLIRLARWTWPTGTFCVTDVVILVGTDSGIDNSRANTRRPPPASAGSYVGGGAKGGAGVSGDPRPCVACLSAAGELRVLRLGPMGVEELHRSQDMVGGGMLTVPSTFRHQFLLVSSNPASGRA------NIHIGKEAVPRHRLQALLSRGDFNRALELARAHGMDETEVHAARFLSLL 314
            L+RLRAG+ V V    S   +P         A +   S +    +  V +GG+SVW   R+  +G+R  +    A+T          G                   LFGGG  S + L A G+W +V D  GGL+WW   +L++L R+ W                    D        P P       GGGA         P PCVA + A G L VL+L   G   LH S        +  PS                        ++   +EA+P HR++ALLSRG  + AL LARAHGMDETE+H A+  +LL
Sbjct:  218 LRRLRAGLRVNVTT-LSTVTDPAQQQQQPPSAISLALSWQPAQTLIYVVSGGISVWSCPRSSAQGIR--LADSHAATAL--------GXXXXXXXXXXXXXXXXXXXLFGGGAPSRLALCAGGQWAIVTDTAGGLAWWDARALLQLRRYAWR-------------------DRGAVVDCAPLPH------GGGA---------PGPCVAAVFARGALCVLQLLLGGCAVLH-SVSAPAATRVVAPSPHXXXXXXXXXXXXXXXXXXXXTLSVARAREALPLHRMRALLSRGLLDAALALARAHGMDETELHVAQLAALL 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig768.15685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSU3_ECTSI2.370e-8050.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ38_9PHAE1.830e-7148.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDW9_9STRA1.660e-1830.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROSITEPS51313VPS28_Ncoord: 1..16
score: 8.585

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig768contigH-paniculata_contig768:18885..21787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig768.15685.1mRNA_H-paniculata_contig768.15685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig768 18885..21787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig768.15685.1 ID=prot_H-paniculata_contig768.15685.1|Name=mRNA_H-paniculata_contig768.15685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=332bp
KALKRLRAGISVTVADGSSRGQNPTSAAVAAMRADACLQSLRDESRVYLV
ANGGLSVWRRGRNGRGLRSRVVKKAASTVEEGKRQGNEGSAGTAITKLEK
IDGVCAGVLFGGGGASSVELSADGRWVVVVDDRGGLSWWTTPSLIRLARW
TWPTGTFCVTDVVILVGTDSGIDNSRANTRRPPPASAGSYVGGGAKGGAG
VSGDPRPCVACLSAAGELRVLRLGPMGVEELHRSQDMVGGGMLTVPSTFR
HQFLLVSSNPASGRANIHIGKEAVPRHRLQALLSRGDFNRALELARAHGM
DETEVHAARFLSLLRDTGTPPTSGSKSGEEAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017898VPS28_N