prot_H-paniculata_contig768.15684.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig768.15684.1
Unique Nameprot_H-paniculata_contig768.15684.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length139
Homology
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BLAST of mRNA_H-paniculata_contig768.15684.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 4.900e-22
Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 0 
Query:    1 DRVCALRGVIVYILTLFHHSETD-----AGDGTEPSV--PSTVTVELEHPAERAVWNADASCVVVGDESGKLHFITSDGTLLFSQQVATPMSRRTHGPDGV----------PLAFHCLKFS 104
            DRVCALRG +V+I T FH    +     +G+G   +    S+V++EL HPAE   WN+ ASCVVVGD SG+LHF+T++GTL+FSQ + T ++R     D            P AF C+KF+
Sbjct:  106 DRVCALRGEVVHIFTFFHAGAEEVGGSSSGEGATAAAGESSSVSLELGHPAECGAWNSTASCVVVGDASGRLHFVTAEGTLIFSQPLLTNLARDGSSSDDPESGGETTVKSPRAFSCIKFA 226
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BLAST of mRNA_H-paniculata_contig768.15684.1 vs. uniprot
Match: A0A6H5KQ38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ38_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 2.170e-14
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 0 
Query:   24 AGDGTEPSVPSTVTVELEHPAERAVWNADASCVVVGDESGKLHFITSDGTLLFSQQVATPMSRRTHGPDGV----------PLAFHCLKFS-ALKTRRQGSSA 115
            AG        S+V++EL HPAE A WN+ ASCVVVGD SG+LHF+T +GTL+FSQ + T + R                  P AF C+KF+ +  TR  G++A
Sbjct:   22 AGATAAAGKSSSVSLELGHPAECAAWNSTASCVVVGDASGRLHFVTPEGTLIFSQPLLTNLVRGXXXXXXXXXXXETTAKSPRAFSCIKFATSTDTRGPGAAA 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig768.15684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSU3_ECTSI4.900e-2244.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ38_9PHAE2.170e-1443.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig768contigH-paniculata_contig768:17050..18336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig768.15684.1mRNA_H-paniculata_contig768.15684.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig768 17050..18336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig768.15684.1 ID=prot_H-paniculata_contig768.15684.1|Name=mRNA_H-paniculata_contig768.15684.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp
DRVCALRGVIVYILTLFHHSETDAGDGTEPSVPSTVTVELEHPAERAVWN
ADASCVVVGDESGKLHFITSDGTLLFSQQVATPMSRRTHGPDGVPLAFHC
LKFSALKTRRQGSSALSLDLKSTQKAGPFRREEGGGEEL
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