mRNA_H-paniculata_contig768.15682.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig768.15682.1 vs. uniprot
Match: A0A6H5KX60_9PHAE (MAGE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX60_9PHAE) HSP 1 Score: 285 bits (729), Expect = 4.460e-85 Identity = 147/282 (52.13%), Postives = 207/282 (73.40%), Query Frame = 1
Query: 415 FSQSAESAREIVAKVAAASSKDLQIEQRDEKKASDLSSTEKTKLIKSMMRFLIMKGLNREPATKKEMLDLVMGKSYRTKGVLKYVMSKAGDLLKETVGFKLKAVGADKPFAIKDTYYVINALNNSHHAKLVLKGQGQAGRGLLTVILCLIYCTVDKRIAEDELYKKLHEKLDNRIPK------DPKK--RADVDGLGDVSEHLATFVKQHYLLKSKTERPNTDGGVEDITSYSMGARSYLEVGNQQVVVLMSEIMGQSVDPSVLVEMEDECSQSQTQATSAD 1236
FS+S SAR + K A SK++QIE++D+KK ++LS K LIK MMRFL+MKGLN EP T+KE++D V+G+ YR GVLK++++KA + L++ +GFK+K DKP+ +KDT+YV+N LNN H K VL+G+GQAGRGLL ++L +I+C+ DK +AE++L+KKLH+ +D R+P+ +PK R VDGLGDV EHLA F KQHYLLK ++P DGG E I YSMG RS LE+G++Q+V LM+++MGQS+DPS L+ +E++ SQ +Q + D
Sbjct: 133 FSESQTSARSQMVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILTKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVDERVPEKAWNGSNPKNKVRVHVDGLGDVHEHLAMFTKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSIDPSDLLGLEEQESQGLSQMATQD 414
BLAST of mRNA_H-paniculata_contig768.15682.1 vs. uniprot
Match: D8LSU2_ECTSI (MAGE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU2_ECTSI) HSP 1 Score: 275 bits (704), Expect = 2.260e-83 Identity = 138/271 (50.92%), Postives = 200/271 (73.80%), Query Frame = 1
Query: 448 VAKVAAASSKDLQIEQRDEKKASDLSSTEKTKLIKSMMRFLIMKGLNREPATKKEMLDLVMGKSYRTKGVLKYVMSKAGDLLKETVGFKLKAVGADKPFAIKDTYYVINALNNSHHAKLVLKGQGQAGRGLLTVILCLIYCTVDKRIAEDELYKKLHEKLDNRIPK------DPKK--RADVDGLGDVSEHLATFVKQHYLLKSKTERPNTDGGVEDITSYSMGARSYLEVGNQQVVVLMSEIMGQSVDPSVLVEMEDECSQSQTQATSAD 1236
+ K A SK++QIE++D+KK ++LS K L+K MMRFL+MKGLN EP T+KE++D V+G+ YR GVLK++++KA + L++ +GFK+K DKP+ +KDT+YV+N LNN H K VL+G+GQAGRGLL ++L +++C+ DK +AE++L+KKLH+ +D R+P+ +PK R VDGLGDV EHLA F KQHYLLK ++P DGG E I YSMG RS LE+G++Q+V LM+++MGQS+DPS L+ +E++ SQ +Q + +
Sbjct: 1 MVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLVKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILNKADEKLQQGMGFKIKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSIVFCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHVDGLGDVHEHLAMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQESQGLSQMATQE 271
BLAST of mRNA_H-paniculata_contig768.15682.1 vs. uniprot
Match: A0A835ZPS1_9STRA (Protein-L-isoaspartate O-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPS1_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.250e-27 Identity = 90/235 (38.30%), Postives = 128/235 (54.47%), Query Frame = 1
Query: 544 LIKSMMRFLIMKGLNREPATKKEMLDLVMGKSYRTKGVLKYVMSKAGDLLKETVGFKLKAV------GADKPFAIKDTYYVINALNNSHHAKLVLKGQG--QAGRGLLTVILCLIYCTVDKRIAEDELYKKLHEKLDNRIPK---DPKKRAD-----VDGLGDVSEHLATFVKQHYLLKSKTERPNTDGGVEDITSYSMGARSYLEVGNQQVVVLMSEIMGQSVDPSVLVEMEDE 1200
L++ M RFL++KG+ REP + + + VMG RTK V +V+ +A +LL+ T G+++ KP+ K+T+YV+NAL + H KL+ + A G L V L +IYC K + E L LH D+RI K D R V G+G E L TFV QHYLL++K E GG E IT YSMG R+YLE+G Q++ + E +D S+L E+ D+
Sbjct: 127 LVRRMARFLLLKGVRREPVPRGKCVADVMGAHKRTK-VTAFVLREASELLERTFGYRVAMTPQAFDDARRKPWYSKETFYVVNALARADHQKLLGRAPSCDAALLGFLMVTLGVIYCQQSKSVTEPALRAALHA-FDDRIAKTAPDAGARGASGNDLVPGVGPFREALRTFVSQHYLLETKEE---VGGGGETITEYSMGPRAYLEIGRPQLIKFLYETRQLPLDRSLLAELSDD 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig768.15682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig768.15682.1 >prot_H-paniculata_contig768.15682.1 ID=prot_H-paniculata_contig768.15682.1|Name=mRNA_H-paniculata_contig768.15682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=388bp MSRFSRRSKRSSSVASEESVTQETVPEIVDRKPTRSRKRSQQLEEEDEDEback to top mRNA from alignment at H-paniculata_contig768:1714..14778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig768.15682.1 ID=mRNA_H-paniculata_contig768.15682.1|Name=mRNA_H-paniculata_contig768.15682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13065bp|location=Sequence derived from alignment at H-paniculata_contig768:1714..14778- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig768:1714..14778- >mRNA_H-paniculata_contig768.15682.1 ID=mRNA_H-paniculata_contig768.15682.1|Name=mRNA_H-paniculata_contig768.15682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2328bp|location=Sequence derived from alignment at H-paniculata_contig768:1714..14778- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |