prot_H-paniculata_contig767.15670.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig767.15670.1
Unique Nameprot_H-paniculata_contig767.15670.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
BLAST of mRNA_H-paniculata_contig767.15670.1 vs. uniprot
Match: A0A6H5JTW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW8_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.710e-20
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 0
Query:    1 MIIEYASLAGGRPAAESVNHPRRKLECSLIAHNKSAGGK-----GFTCNPRVTATDPYGIQSNSGPVAPALPLMLNVPYPGADSDFPERALQYLVNRFTGPRDTVSCVCDEHNRAVEVALSRGRRMEVFLADKAAKDGVQKRKTNAFFSAHKEGKFR 152
            + + Y+S   GRPA+ +  H +   +  ++ H  S         GFT N +VT  D YG  + +   +    ++ ++ +PG   D+P +AL +LVNR++   DTV     EHN  VE A+SRGR++E F+A   A   V+ R   AF +A+ +G F+
Sbjct:   10 LTLVYSSTGAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDGFTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWPTKALMFLVNRYSRQGDTVLLFGAEHNTGVETAISRGRKVEAFVASPEAAAKVEARTEIAFQTAYAQGIFK 166          
BLAST of mRNA_H-paniculata_contig767.15670.1 vs. uniprot
Match: A0A6H5JEK0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK0_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.320e-15
Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 0
Query:    1 MIIEYASLAGGRPAAESVNHPRRKLECSLIAHNKSAGGK-----GFTCNPRVTATDPYGIQSNSGPVAPALPLMLNVPYPGADSDFPERALQYLVNRFTGPRDTVSCVCDEHNRAVEVALSRGRRMEVFLADKAAKDGVQKRKTNAFFSAHKEGKFR 152
            + + Y+S   GRPA+ +  H +   +  ++ H  S         GFT N +VT  D YG  + +   +    ++ ++ +PG   D+P +AL +LVNR++   DTV     EHN  VE A++RGR++E F+A   A   V+ R   AF +A+ +G F+
Sbjct:  512 LTLVYSSPRAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDGFTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWP-KALMFLVNRYSRQGDTVLLFGAEHNTRVETAITRGRKVEAFVASPEAAVKVEARTEIAFQTAYAQGIFK 667          
BLAST of mRNA_H-paniculata_contig767.15670.1 vs. uniprot
Match: D7G3U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 6.420e-15
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   51 DPYGIQSNSGPVAPALPLMLNVPYPGADSDFPERALQYLVNRFTGPRDTVSCVCDEHNRAVEVALSRGRRMEVFLADKAAKDGVQKRKTNAFFSAHKEGKFRGSAESTKEVAIGPNRLPRALPHDTTP 178
            D +G    + P + +  ++ +VPY GAD D+P + L  L NR+T   DT+  +  E N  V   L+RGRR+E ++  +   + VQ+    AF +A+  G F+       EV I P RLPR LP DTTP
Sbjct:  380 DLFGNNQTASPPS-STSILTDVPYEGADVDWPSKVLLLLTNRYTNQGDTIIVLGAERNACVATGLARGRRVEAYVTSETHVEHVQEWGETAFRTAYTRGIFQPEVVVPTEVEIKPGRLPRGLPLDTTP 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig767.15670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTW8_9PHAE4.710e-2033.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEK0_9PHAE1.320e-1532.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G3U5_ECTSI6.420e-1537.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig767contigH-paniculata_contig767:26241..27830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig767.15670.1mRNA_H-paniculata_contig767.15670.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig767 14354..28374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig767.15670.1 ID=prot_H-paniculata_contig767.15670.1|Name=mRNA_H-paniculata_contig767.15670.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MIIEYASLAGGRPAAESVNHPRRKLECSLIAHNKSAGGKGFTCNPRVTAT
DPYGIQSNSGPVAPALPLMLNVPYPGADSDFPERALQYLVNRFTGPRDTV
SCVCDEHNRAVEVALSRGRRMEVFLADKAAKDGVQKRKTNAFFSAHKEGK
FRGSAESTKEVAIGPNRLPRALPHDTTPERVREAVANALERGKTKADAEQ
EVAEHVAGIFGWDLKRHTYMEDDLLTVHGKEGRSY*
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