mRNA_H-paniculata_contig767.15669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A6H5JUD4_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUD4_9PHAE) HSP 1 Score: 119 bits (297), Expect = 7.620e-29 Identity = 62/106 (58.49%), Postives = 74/106 (69.81%), Query Frame = 3
Query: 27 LTLLLSLSSGAQLASAFK-----PNFPPMKETQVLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSACIDC 329
L LLS+ L FK P PP+K+ QVLV GA G VG+ V LSK G+KVRAMVRD + +YPRK EMGNGP+E+V+GDVLDKASLE+ AGCS+CI C
Sbjct: 7 LLALLSILGVVHLGKGFKMNPKPPQLPPLKDQQVLVTGAAGNVGQLVCLRLSKQGYKVRAMVRDLDGFYPRKEEMGNGPIEVVLGDVLDKASLEAHMAGCSSCIAC 112
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: UPI001A0E33E3 (NAD(P)H-binding protein n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI001A0E33E3) HSP 1 Score: 59.3 bits (142), Expect = 3.980e-8 Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 3
Query: 108 QVLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCS 314
+ LV GA G G ++V L + G VRA+VRD R G +E+VVGDVLDKASLE+A AGC+
Sbjct: 2 KALVAGATGATGSRIVAQLVQRGVPVRALVRDLAAAQARLPVEG---VELVVGDVLDKASLEAAIAGCT 67
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A653YWN0_9BURK (Nucleoside-diphosphate sugar epimerase n=1 Tax=Massilia sp. 9I TaxID=2653152 RepID=A0A653YWN0_9BURK) HSP 1 Score: 60.1 bits (144), Expect = 2.230e-7 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 3
Query: 111 VLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCS 314
+LV GA G++G QVV+ L + G KVRA+VRD P K+E G +E+V GD+LD SL SA+AG S
Sbjct: 3 ILVTGATGQIGRQVVQQLIQRGAKVRALVRD-----PAKAEFPAG-VEVVQGDLLDPDSLRSAYAGVS 64
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A830G8C9_9EURY (NADH-binding protein n=1 Tax=Halarchaeum nitratireducens TaxID=489913 RepID=A0A830G8C9_9EURY) HSP 1 Score: 59.3 bits (142), Expect = 4.910e-7 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 3
Query: 108 QVLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSA 317
+VLV GA G +G +V L + G VRA+VRD E Y P +E+VVGD+LD ASL+ F GC A
Sbjct: 2 RVLVTGATGFIGGHLVPELVEAGHDVRALVRDPERYDPPAG------VEVVVGDLLDPASLDGVFEGCDA 65
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: UPI0017A526C9 (NAD(P)H-binding protein n=2 Tax=Streptomyces sp. TaxID=1931 RepID=UPI0017A526C9) HSP 1 Score: 57.4 bits (137), Expect = 1.960e-6 Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 3
Query: 111 VLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSA 317
+LV GA G +G +VV+ L+ G KVRA+ RD P K+ + +G +E+V GD LD ASLE A AG +A
Sbjct: 5 ILVTGATGTIGSEVVRQLTARGDKVRALTRD-----PAKARVPSG-VEVVRGDYLDPASLEGAMAGVTA 67
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: J3L9G3_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3L9G3_ORYBR) HSP 1 Score: 57.8 bits (138), Expect = 2.050e-6 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 3
Query: 90 PPMKETQVLVVGANGRVGEQVVKNLSKLGFKVRAMVR--DKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSACIDC 329
P ++T VLVVGA R+G VV+ L G+ V+A+VR D+E +M +EIVVGDV D +S++SA +GC+ I C
Sbjct: 28 PGAQDTTVLVVGATSRIGRIVVRKLMLRGYNVKALVRRNDQEVI-----DMLPRSVEIVVGDVGDPSSVQSAVSGCNKVIYC 104
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A554SMA5_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Inquilinus sp. KBS0705 TaxID=2578108 RepID=A0A554SMA5_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 2.140e-6 Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 3
Query: 108 QVLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSACI 323
+VL++GANGR G+Q++K L K +KV ++R+K+T+ + + L + GDV D A ++ A GC A I
Sbjct: 2 KVLLLGANGRTGKQILKQLLKRRYKVSVLIRNKKTF-----SISSSSLTVFEGDVTDAADIDMAIEGCGAII 68
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: UPI0019CB7EE8 (NAD(P)H-binding protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019CB7EE8) HSP 1 Score: 55.1 bits (131), Expect = 2.590e-6 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 3
Query: 81 PNFPPMKETQVLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAG 308
P PP + VL+VGA G G Q+V + G+ V A+VRD P K ++ + L +V GDVLD+ SLE+A G
Sbjct: 34 PRHPPAR---VLIVGATGGTGRQLVTQALERGYSVTALVRD-----PSKLQVDHPQLTVVQGDVLDEGSLEAAMRG 101
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A4R0QWR1_9CHLB (SDR family oxidoreductase n=1 Tax=Chlorobium sp. N1 TaxID=2491138 RepID=A0A4R0QWR1_9CHLB) HSP 1 Score: 56.2 bits (134), Expect = 3.460e-6 Identity = 34/71 (47.89%), Postives = 42/71 (59.15%), Query Frame = 3
Query: 111 VLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAGCSACI 323
VLV GA+GR G+ VV L G VRA+VR +E R + G G +EI VG + D+ SLE A GC A I
Sbjct: 11 VLVAGASGRTGKWVVSRLRHYGVPVRALVRSRE----RAGDFGEG-VEIAVGSLQDRRSLEKAAGGCGAVI 76
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Match: A0A1G5UAI2_9HYPH (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains n=4 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A1G5UAI2_9HYPH) HSP 1 Score: 56.6 bits (135), Expect = 3.730e-6 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 3
Query: 111 VLVVGANGRVGEQVVKNLSKLGFKVRAMVRDKETYYPRKSEMGNGPLEIVVGDVLDKASLESAFAG 308
+LV GA GRVG VV++L++ G +VR + RD P K++ G+G +E+V GD+LD +L +AF+G
Sbjct: 3 ILVTGATGRVGRNVVQHLTQRGARVRVLTRD-----PAKADFGSG-VEVVKGDLLDIDALRAAFSG 62 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig767.15669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig767.15669.1 >prot_H-paniculata_contig767.15669.1 ID=prot_H-paniculata_contig767.15669.1|Name=mRNA_H-paniculata_contig767.15669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MLRASLTLLLSLSSGAQLASAFKPNFPPMKETQVLVVGANGRVGEQVVKNback to top mRNA from alignment at H-paniculata_contig767:5593..14190- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig767.15669.1 ID=mRNA_H-paniculata_contig767.15669.1|Name=mRNA_H-paniculata_contig767.15669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8598bp|location=Sequence derived from alignment at H-paniculata_contig767:5593..14190- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig767:5593..14190- >mRNA_H-paniculata_contig767.15669.1 ID=mRNA_H-paniculata_contig767.15669.1|Name=mRNA_H-paniculata_contig767.15669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig767:5593..14190- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |