mRNA_H-paniculata_contig7662.15662.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 254 bits (648), Expect = 8.360e-67 Identity = 156/428 (36.45%), Postives = 235/428 (54.91%), Query Frame = 1
Query: 91 VESSTEEVKILLKHVINRLE--PAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR*IR 1344
+E +++K L + RLE P K+A P G PV + WH+ R + + AL +DR VVAL G G+GKT VAA + RS +VR F DGI+W+ V +GA RL +L+LQ+A M+H ++ G GR P + A+YI++ +EE R L+CL+VADNVW+ VV L++ G+WVLL+TRD V+ ++ G V + L +AE +L++AAEL +RLP A D+++ C + MD++FVGRWS VRG + W I + E++ G + + P RR AIL+ GFE++ +++ + LY+SLAV P G FS+ D AVLL+D + + A + + LE W+I+ R + Y +HDAH DF + + + +R +KR R
Sbjct: 149 LEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDR-----ACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASED-----SATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKV-------GHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSP----------STEDEASAGGVVDVLERWSII-RSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTR 548
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.560e-63 Identity = 153/425 (36.00%), Postives = 229/425 (53.88%), Query Frame = 1
Query: 94 ESSTEEVKILLKHVINRLEPAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR*IR 1344
E + EE+ + ++ +L P P KVA P+G P + WH+ R + V ETV D V LVG GAGKT A+ + S VR F DGI+W+ V +G D L L+LQ+A+M+ + G GR P + G +Y+++ VE + L+CL+VADNVW++ VV LL+ G+W+LL+TRD +++ +A G +V + L EAE +LR+AAEL RLP A D++E C + MD++FVGRWS VRG + W + + ++ G ED RR AIL+AGFE++ +++ + LY+SLAV P G F+V D AVLL+D + + + E+LE W I+ R E Y +HDAH++F + + + ++R IKR +R
Sbjct: 176 EGNHEELLAKTETILRQL-PKPPAKVANVPKGTPTHKSWHVERRN-VTETVFQALDADGGPHL----VGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDD-----GLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDS-------RVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGG----------VVEALERWTII-RSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVR 571
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 231 bits (588), Expect = 2.420e-59 Identity = 159/490 (32.45%), Postives = 249/490 (50.82%), Query Frame = 1
Query: 85 NEVESSTEEVKILLKHVINRLEPAQPT--KVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR*IRGCG*HLAAAYGADGGYARL*PSRFRPVSAGNGNCRHPSRASN*----GIWVACTGVGGPG 1512
N+ +S E + +++ ++ T K+ P+G P + W++ R V +TV +D V LVG G+GKT VA+ RS +V+ F DGI W+SV DGA +RL +L+LQ+A +++ + GR P +S C A+YIR+ +++ + L+CL+VADNVW+ VV LL+ G+WVLL+TR+ ++ +A G +V + L +A +LR+AAEL ++P A D++E C + MD++FVGRWS VRG + W + + R+E G D K + ARR AILRAGFE++ +++ + LY+SLAVFP G F+V D AVLL+D A + + ++LE W +L R + Y +HDAH+ F + + + +R +KR + +C R+S+ G+W+A GVGG G
Sbjct: 3 NKQAASQERILENQSKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRH-VMDTVFEGLASDGGPRL----VGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRP-TSSDDC----AAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKV-------REEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPC----------AEDEASVAVVVDTLERWTVL-RSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSI------------------------------SCLEVLRSSDPYVLKGLWLAVEGVGGDG 434
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 228 bits (582), Expect = 3.130e-58 Identity = 153/437 (35.01%), Postives = 237/437 (54.23%), Query Frame = 1
Query: 94 ESSTEEVKIL-LKHVINRLEPAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALF-LNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILG----------RQGENRYSLHDAHADFVKRWVWNFPELRERCIKR*IR 1344
+++T+E+ + + +I+RL P K+A P+ P+ + WH+ R ++ AL + H +V LVG G+GKT A+ + RS++VR F DG++W++V GA DRL +L+LQ+A MM +V G + P S GA+YI+ ++ + L+CL+VADNVW+ VV LL+ G+WVLL+TRD +++ + G +V + + EAE +LR+A+EL TRLP A D++E C + MD++FVGRWS VRG S+ W + + +I E G ARR A+L+AGFE++ +++ + LY+SLAV P G F+V D AVLL+D A + A + E LE W++L R G Y LHDAH+DF + + + ++R + R R
Sbjct: 175 QAATQEMILANTESIIDRLSKT-PAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPH------LVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGGRR----PATSDD----GAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVS-------GTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDR----------KPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGH--YVLHDAHSDFAREKLMDRGDVRRPALVRWTR 577
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 226 bits (576), Expect = 5.220e-58 Identity = 147/441 (33.33%), Postives = 224/441 (50.79%), Query Frame = 1
Query: 91 VESSTEEVKILLKHVINR--LEPAQ---------------PTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQA-GGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR 1335
V E++K LL+HV + L +Q P +A P G P + WH+ R ++ AL E +V LVG G+GKT AA + RS +VR F DGI+W+SV DGA +RL+ L++ +A ++ + G GR P GA+Y R+ ++ + L+CL+VADNVW+ AV+ LL+ G+WVLL+TRD ++ A GG +V + L +A +LR+A+EL RLP A +++E C + MD++FVGRWS VRG S+ W + + E R + + RR A+L+AGFE++ +++ LY+SLAV P G F+ D LL+D + V + L +LE W+ L +G Y +HDAH+ F + V + +R+ +KR
Sbjct: 135 VGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDAL-----PGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDD-----GAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSDNVWDIR----------AVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVS----------TEELIRTLERWSALRTEG-GAYRMHDAHSGFARDCVMDRGYVRKPAVKR 544
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 214 bits (544), Expect = 1.520e-55 Identity = 140/409 (34.23%), Postives = 216/409 (52.81%), Query Frame = 1
Query: 133 VINRLEPAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR 1335
+I+RL P P K A P+G P + WH+ R V ETV + V LVG GAGKT AA + RS+ VR F DGI+W++V GA RL +L+LQ+A M+ + G G P E+ A YI++ +E + L+CL VADNVW+ VV +LL+ G+ VLL+TR +++ A G V + L +AE +LR AAEL RLP A D+++ C + MD++FVGRWS VRG + W + + +I ++ + G +G+ RR AIL+AG E++ +++ + LY+SLAV P V D A+LL+D + A ++ R+ + LE W++L +Y +HD ++F + + + ++R ++R
Sbjct: 87 IIDRL-PKPPIKKAYVPQGTPTRKSWHVERH--VTETVVEALTGEAGPRL----VGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADA----YIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGA-----RGN-----RRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDR----------DPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRR 464
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.090e-48 Identity = 140/415 (33.73%), Postives = 214/415 (51.57%), Query Frame = 1
Query: 124 LKHVINRLEPAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVA--RSDQVRTFFCDGILWMSVGD--GAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEERNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSS----EEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTA-RRHAILRAGFEEM--QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR 1335
L ++ RL+P K+AP P+ P + +H+ R+ V + V + D + AL G GAGKT AA + R D+VR F DG++W+ VG G DRL +L+ +A+ +H VM G P G SY+R++V + LRCL+VAD+VW+A+VV L + G+WVLLTTR ++ + ++D L EAE +LR AAEL RL + V+E C + MD +FVG W+ VR ++ W+ ++ ++ Q + +R + + G G A R A+LRAGF+ + ++ + LY+ LAVFP+G F D AVLL + ++ AK LE W +L +Y HDAHADF ++ + + +LRE ++R
Sbjct: 154 LDQILARLQPGP--KLAPVPKKAPFTKSFHVVRDGVV-DRVCKILGGDGGP----AMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGA------VDAPTGDDGVSYVRKIVSQEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVMD--TLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKV------GNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLEN-----------------EEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVER 530
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 184 bits (468), Expect = 3.290e-45 Identity = 131/377 (34.75%), Postives = 195/377 (51.72%), Query Frame = 1
Query: 181 PRGLPVAEHWHITRESKVKETVAALFLNDRH--EEFP---VGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAV-GASYIRRMVEERNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM--QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILG-RQGENRYSLHDAHADFV 1284
P G P W++ R + L + + FP +V L GPGGAGK+ VA+ V V+ FF +LW+SVG GA DRL L+ ++A + V+ R P EA+ + GA+YIR + + R L+VAD+VWDA V+ L +AG WV+ TTR +++ G + + + EAE +LR+AA+L + RLP AY++M+RCDF V+D++ VGRW ++R S E W++ LD+I I + A GG G P R A+LRAG + N Q LY +LA+ P G F + +LL+ G + A + A+ + +LE +IL + Y +H+ H DFV
Sbjct: 10 PSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFP--GTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSI------IETQRA------GGDGGQLLPW--RAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLY----------GDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFV 360
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 181 bits (460), Expect = 3.560e-43 Identity = 140/421 (33.25%), Postives = 216/421 (51.31%), Query Frame = 1
Query: 88 EVESSTEEVKILLKHVI-NRLE--PAQPTKVAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVGVVALVGPGGAGKTRVAATVARSDQVRTFFCDGILWMSVGDGAIDRLQTLILQVAEMMHGQVMGGKGRPPPEASFPCPAVGASYIRRMVEE----RNLRCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGGAIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPT--ARRHAILRAGFEEM----QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGW-AILGRQGENR-------YSLHDAHADFVK 1287
+++++T+EV + +I +RL PA+P K+ P+ P+ + WH+ R V+ L + +V LVG G+GKT A+ + RS++ DRL +L+LQ+A M++ ++ G + P S G +YI+ + L+CL V DNVW+ VV LL+AG+WVLL+TRD +++ G +V++ L EAE +LR+AAEL TRLP A D++E C + MD++F GR S VRG S+ W + + E KG E G +G+ T ARR A+++AGF ++ +++ + LY+SLAV P G F+V D AVL++D A + A + E LE W A+ +G R Y LHDAH+DF +
Sbjct: 147 KIQAATQEVILANTEIITDRLSKTPAKPAKI---PKSTPIWKSWHVERFDVVERVFEPLTADGGPP-----LVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGGRR----PATSDD----GTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKV--------RTEMSKG-ECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMP----------SAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAR 513
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 178 bits (451), Expect = 8.800e-42 Identity = 132/413 (31.96%), Postives = 205/413 (49.64%), Query Frame = 1
Query: 169 VAPKPRGLPVAEHWHITRESKVKETVAALFLNDRHEEFPVG---VVALVGPGGAGKTRVAATVARSDQVRTFFCD-GILWMSVGDGAIDRLQTLILQVAEMMH------GQVMGGKGRPP--PEASFPCPAVGASYIRRMVE----ERNL----RCLLVADNVWDAAVVDLLLQAGLWVLLTTRDSKVLDQAGG--AIVDMGALDTFEAEQLLRQAAELEDNTRLPHVAYDVMERCDFLVMDISFVGRWSDVRGSSEEHDWQSVLDNISRQDEEIRKEEALKGFEDGGGKGSSPPTARRHAILRAGFEEM--QNKQHRHLYMSLAVFPKGSTFSVDDVAVLLHDTTDIHGERVGLNSRARAKQDAKRLTESLEGWAILGRQGENRYSLHDAHADFVKRWVWNFPELRERCIKR 1335
+A P P+ + W I RE V L +NDR G VV + GP GAGK+ +A+ + VR F G++W+SVG GA DRL ++ ++A M+H G RPP P+ P GA+Y+R ++ ER+ L+VAD+VW+A V+ L G +L TTR + L A G +++ + + EAE+LLR+AA L D ++LP A+D++ R + MD+++VGRW VRG +++ W +VL ++ I + +KG + R A+LR G + ++ + LY+SL V P+ +FSVDDV L+ D + A Q A +LE W++L R RY +H +HAD + + P + + R
Sbjct: 257 IAKSPAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVE-PEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHV------IDAQNFMKG---------AALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDGS------------AEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALAR 641 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7662.15662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7662.15662.1 >prot_H-paniculata_contig7662.15662.1 ID=prot_H-paniculata_contig7662.15662.1|Name=mRNA_H-paniculata_contig7662.15662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=446bp VDVRATAAQNTQDLAFLSRAASAIGVSLNEVESSTEEVKILLKHVINRLEback to top mRNA from alignment at H-paniculata_contig7662:4947..8195- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7662.15662.1 ID=mRNA_H-paniculata_contig7662.15662.1|Name=mRNA_H-paniculata_contig7662.15662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3249bp|location=Sequence derived from alignment at H-paniculata_contig7662:4947..8195- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7662:4947..8195- >mRNA_H-paniculata_contig7662.15662.1 ID=mRNA_H-paniculata_contig7662.15662.1|Name=mRNA_H-paniculata_contig7662.15662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2676bp|location=Sequence derived from alignment at H-paniculata_contig7662:4947..8195- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |