prot_H-paniculata_contig7662.15661.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7662.15661.1
Unique Nameprot_H-paniculata_contig7662.15661.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
BLAST of mRNA_H-paniculata_contig7662.15661.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.220e-21
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    6 FKMGNYVLVAHMRKQGPHVKLMSRWTGPWRVVSDDRERVYEAQHLATGETRYVHVVRPRFYADKEFEVSKRVAEGFHHLQHQAGCFVGRTGGVKNTERGGEYVVRVYWQGLD---DNWR 121
            F +G+YV+VA +R+ G   KL S WTGPWRVVS  ++ VY  Q++  G+ R VHV R RFYAD E  V+  + + F H   Q    +     +     G  Y+VRV W G +   D W+
Sbjct:   15 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQ 133          
BLAST of mRNA_H-paniculata_contig7662.15661.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.030e-19
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    6 FKMGNYVLVAHMRKQGPHVKLMSRWTGPWRVVSDDRERVYEAQHLATGETRYVHVVRPRFYADKEFEVSKRVAEGFHHLQHQAGCFVGRTGGVKNTERGGEYVVRVYWQGLD---DNWR 121
            F +G+YV+VA +R+ G   KL S WTGPWRVVS  ++ VY  Q++  G+ R VHV R RFYAD E  V+  + + F H   Q    +     +     G  Y+VRV W G +   D W+
Sbjct:  270 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQ 388          
BLAST of mRNA_H-paniculata_contig7662.15661.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.770e-19
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    6 FKMGNYVLVAHMRKQGPHVKLMSRWTGPWRVVSDDRERVYEAQHLATGETRYVHVVRPRFYADKEFEVSKRVAEGFHHLQHQAGCFVGRTGGVKNTERGGEYVVRVYWQGLD---DNWR 121
            F +G+YV+VA +R+ G   KL S WTGPWRVVS  ++ VY  Q++  G+ R VHV R RFYAD E  V+  + + F H   Q    +     +     G  Y+VRV W G +   D W+
Sbjct: 1493 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQ 1611          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7662.15661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KAI3_9PHAE2.220e-2140.34Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JVS6_9PHAE1.030e-1940.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.770e-1940.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7662contigH-paniculata_contig7662:1829..2221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7662.15661.1mRNA_H-paniculata_contig7662.15661.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7662 1691..2408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7662.15661.1 ID=prot_H-paniculata_contig7662.15661.1|Name=mRNA_H-paniculata_contig7662.15661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MKLLHFKMGNYVLVAHMRKQGPHVKLMSRWTGPWRVVSDDRERVYEAQHL
ATGETRYVHVVRPRFYADKEFEVSKRVAEGFHHLQHQAGCFVGRTGGVKN
TERGGEYVVRVYWQGLDDNWRMPRRRCGPN*
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