prot_H-paniculata_contig75643.15549.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.360e-28 Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 0
Query: 1 MIADSGASNHFIDNQLFDNIESKIVDFVQYNPPLPISAAGRHVLHGIGRGTLQVFAKDQQERKRAIQLPVAIVPGLGRHLFSAGTALKKGVSTVISNQPHLDLDQFKVPLR-QDYNGTLYCLDLEISRKVNIMKEQQLQTPAALVTAAGADI 151
M D+GASNHF+DN+L +E ++V++ + +PPL I AG+ LHG +G L+V DQ R+I+LP VP LGRHLFS GTA K+GVST I + LD FK+PLR D TL+ DL I+ + T A T +G D+
Sbjct: 45 MTVDTGASNHFLDNELIPALEQRMVEYTKIDPPLLIHVAGQGQLHGTAKGALKVTVTDQNGNPRSIRLPFICVPKLGRHLFSGGTARKQGVSTFIGSTSFLDTGVFKIPLRPDDACDTLFHFDLAIA-------PDSVATHHAFSTISGLDL 189
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.710e-25 Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 0
Query: 5 SGASNHFIDNQLFDNIESKIVDFVQYNPPLPISAAGRHVLHGIGRGTLQVFAKDQQERKRAIQLPVAIVPGLGRHLFSAGTALKKGVSTVISNQPHLDL-----DQFKVPLRQDYNGTLYCLDLEIS-----RKVNIMKEQQLQTPAALVTAAGAD---IWHKRLGH 158
SGAS H++D++L ++E+ + DF P I AG L G +G + VFAKD++ R ++ +VPGLGRHLFS GTA KKG +T++S+QP ++L D + L GTLY LD+ + R+ I +E + V A A+ +WH+RL H
Sbjct: 311 SGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTIMSDQPRIELPATSRDGSTIALVLREVGTLYFLDVRLDTNQCERRRRITEENMNTYENSYVAAPRAEPYNLWHRRLAH 477
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Match: A0A6S7GU81_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU81_PARCT) HSP 1 Score: 58.2 bits (139), Expect = 7.190e-7 Identity = 44/160 (27.50%), Postives = 70/160 (43.75%), Query Frame = 0
Query: 4 DSGASNHFIDNQLFDNIESKIVDFVQYNPPLPISAAGRHVLHGIGRGTLQVFAKDQQERKRAIQLPVAIVPGLGRHLFSAGTALKKGVSTVISNQPHLDLDQFKVPLRQD-YNGTLYCLDLEISR----KVNIMKEQQLQTPAALVTAAGADIWHKRLGH 158
DSGAS H +D + +VD+V + P + V+ +G+GT+ + K + + K A + V VP L ++LFS K+G S + + LD+ L LY LD+ + VN + L+ D+WH+R GH
Sbjct: 288 DSGASQHMS----YD--KEMMVDYVHFVNPQRVRLGDNRVVEALGKGTVWLNIKAENDYKPARLVDVLYVPDLAKNLFSVSVVAKRGYSVELQQSGCVILDKCGTILGSGKMQNNLYVLDISEKKVDCHDVNAATNEHLE-----------DLWHQRYGH 430
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Match: A0A6S7HIB2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIB2_PARCT) HSP 1 Score: 58.2 bits (139), Expect = 7.220e-7 Identity = 44/160 (27.50%), Postives = 70/160 (43.75%), Query Frame = 0
Query: 4 DSGASNHFIDNQLFDNIESKIVDFVQYNPPLPISAAGRHVLHGIGRGTLQVFAKDQQERKRAIQLPVAIVPGLGRHLFSAGTALKKGVSTVISNQPHLDLDQFKVPLRQD-YNGTLYCLDLEISR----KVNIMKEQQLQTPAALVTAAGADIWHKRLGH 158
DSGAS H +D + +VD+V + P + V+ +G+GT+ + K + + K A + V VP L ++LFS K+G S + + LD+ L LY LD+ + VN + L+ D+WH+R GH
Sbjct: 290 DSGASQHMS----YD--KEMMVDYVHFVNPQRVRLGDNRVVEALGKGTVWLNIKAENDYKPARLVDVLYVPDLAKNLFSVSVVAKRGYSVELQQSGCVILDKCGTILGSGKMQNNLYVLDISEKKVDCHDVNAATNEHLE-----------DLWHQRYGH 432
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Match: A0A6S7GNP2_PARCT (Gag-pol poly n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GNP2_PARCT) HSP 1 Score: 56.6 bits (135), Expect = 2.140e-6 Identity = 43/160 (26.88%), Postives = 70/160 (43.75%), Query Frame = 0
Query: 4 DSGASNHFIDNQLFDNIESKIVDFVQYNPPLPISAAGRHVLHGIGRGTLQVFAKDQQERKRAIQLPVAIVPGLGRHLFSAGTALKKGVSTVISNQPHLDLDQFKVPLRQD-YNGTLYCLDLEISR----KVNIMKEQQLQTPAALVTAAGADIWHKRLGH 158
DSGAS H +D + +VD+V + P + + V+ +G+GT+ + K + + K A + V VP L ++LFS K+G S + + LD+ LY LD+ + VN + L+ D+WH+R GH
Sbjct: 285 DSGASQHMS----YD--KEMMVDYVHFVNPQRVRLGDKRVVEALGKGTVWLKIKAENDYKPARLVDVLYVPDLAKNLFSVSVVAKRGYSVELQQSGCVILDKCGTIWGSGKMQNNLYVLDISEKKVDCHDVNAATNEHLE-----------DLWHQRYGH 427 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig75643.15549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig75643.15549.1 ID=prot_H-paniculata_contig75643.15549.1|Name=mRNA_H-paniculata_contig75643.15549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bpback to top |