mRNA_H-paniculata_contig756.15546.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 213 bits (543), Expect = 2.230e-57 Identity = 158/472 (33.47%), Postives = 229/472 (48.52%), Query Frame = 2
Query: 662 GNMSSLRQDALEAAVDSAFAAASTVLTQLKD-ILASVYLIFEQSPRDYHGAEDEEDGSHPKKQRRVYARPL*SELAWGRMLQ------CPDLTEPNSRDARRFRRRFRIPYPFFVELRHPFRRGCNTGCGELADSGERE*---LR*YQPALLDKRVDCPKCVPHI-----------LQAFR*RYFFMSKLNSLPRMPSQPR*RRTM----RWASSGR*ARLMSPTSH---GVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
G MSS A+ V +AF+ A Q + L + L+ + +E+EE+ + K+RRVY R + W LQ + +P SR ARRFR FR+PYPFFVEL ++ G+ SG R L+ + R +C + H+ F RYF +P+ ++ M R SG A + +H G+ P++ T P ++++ T+ L G G+ NDKSI+R+D V +RE Y + + + D KG YL+VD Y +W +L+ +K + ++A+ KRLESVRKDVECFFGI+KGRFRILKL I + + +DNV +TCCILHNMLHS+D E + +WAG GL +AW H + S+ E VEVE GF R++L+ + YR N++AWL
Sbjct: 16 GTMSSSETGAVN--VPAAFSVALAAFNQQQQRTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFT-RYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSG--ATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKR-VLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 201 bits (511), Expect = 8.770e-53 Identity = 153/448 (34.15%), Postives = 220/448 (49.11%), Query Frame = 2
Query: 719 AAASTVLTQLKDILASVYLIFEQSPRDYHGAEDEEDGSHPKKQRRVYARPL*SELAWGRML---QCPDLTEPNSRDARRFRRRFRIPYPFFVEL------RHPFRRGCNTGCGELADSGERE*LR*YQ--------PALLDKRVDCPKCVPHILQAFR*RYFFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPT--SH---GVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
A A+ L QL+ +A +I E D ++++ S K+RRVY R ++ W + L + T+ +R+ARRFR FR+PYPFFV L R F G + G A E + L Q + + V F +YF + +P+ R+ M + T +H G+ P++ I T P ++ + G L +G G NDK+I+R+DK V +R Y YKL +D + EKG YL+VD Y +WR+L+ +K R ++ + KRLES RKDVEC+FGILKGRFRI KL I F + +DNV +TCCILHNMLHSFD + +WAG GL +A D ++ + G + +G E VEVE GF A+R +LV ++ YR E ++ WL
Sbjct: 53 AVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFC-KYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQ-VTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 197 bits (501), Expect = 7.950e-52 Identity = 142/420 (33.81%), Postives = 206/420 (49.05%), Query Frame = 2
Query: 836 PKKQRRVYARPL*SELAWGRMLQCPDLTE-PNSRDARRFRRRFRIPYPFFVELRHPFRRG----CNTGCGELADSGERE*LR*YQPALLDKRV--------DCPKC-------VPHILQAFR*RYFFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPISTRTRK-----------DPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWL-HEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWLRS 1999
PK++R V R L W RML+ DL + P++R+A++FRRRFR+PYPFF+ L + G T EL G R + L R+ D + V H+ F R F RMP++ + M+ + M W P S R+ + +SH + L +G G NDK+I++FDK AVR G Y+ + Y L+ +D + EKG +LIVDG Y W+ L + + + E + ++LESVRKD EC FG++KGRFRI K+ L+ + ++DN+ +TC ILHNML ++DG++L E D DWAG DG LD + H M+ T+ VE +DGF A+R++LV ++ YR V W RS
Sbjct: 49 PKRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTER-FACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMR-------VLSCTRGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTH------EDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 185 bits (470), Expect = 5.780e-50 Identity = 90/204 (44.12%), Postives = 123/204 (60.29%), Query Frame = 2
Query: 1382 GMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
G G+ NDKSI+R+D V +RE Y + + + D KG YL+VD Y +W +L+ +K + ++A+ KRLESVRKDVECFFGI+KG FRILKL I + + +DNV +TCCILHNMLHS+D E + +WAG GL +AW H + S+ E VEVE GF R++L+ + YR N++AWL
Sbjct: 37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 180 bits (456), Expect = 4.220e-46 Identity = 97/213 (45.54%), Postives = 130/213 (61.03%), Query Frame = 2
Query: 1358 GGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
G L +G G NDK+I+R+DK V +R Y YKL +D + EKG YL+VD Y +WR+L+ +K R ++ + KRLES RKDVEC+FGILKGRFRI KL I F + +DNV +TCCILHNMLHSFD + +WAG GL +A D ++ + G + +G E VEVE GF A+R +LV ++ YR E ++ WL
Sbjct: 195 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.270e-44 Identity = 87/225 (38.67%), Postives = 126/225 (56.00%), Query Frame = 2
Query: 1358 GGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRT--MNFGTNG-----------RNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
G L G G NDK+I+R+D V +R Y YKLR + E+ +G +LI+D Y W +L+ +K + ++ A+ + LESVRKDVECFFGILKGRFRILKL + + + +DN+ +TCCILHNMLH+FDGL + + + DW G G DAW H+ T + G+ G G R E ++R+L+ + +R + N++ WL
Sbjct: 29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.650e-44 Identity = 137/412 (33.25%), Postives = 196/412 (47.57%), Query Frame = 2
Query: 839 KKQRRVYARPL*SELAWGRMLQCPD--LTEPNSRDARRFRRRFRIPYPFFVELRHPFR----RGCNTGCGELADSGERE*LR*YQPALLDKRV--DCPKC-------VPHILQAFR*RYF--FMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTS--HGVAP--WHHIPISTR----TRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWLRS 1999
K++R VY RP AW ML+ + L +P ++DAR FRRRFR+PYP F+EL + +G T +L G R + L D P+ + + F R+ F K P+ R + G A M T + AP H + + H+ + LG K G +NDK+IV FD+ V+ ++ + + + L +D E E+GLYLIVDG Y + + ++E+A+ K+LESVRKD+ECFFGILKGRFRILK+P+L+ ++D + TCC LHNMLHS+DGL L E D +WAG DG LD W+ + N P+ ED F ++ +LV + + V W RS
Sbjct: 53 KRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLR-------CLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHKCP-----VQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 167 bits (423), Expect = 3.590e-41 Identity = 127/408 (31.13%), Postives = 190/408 (46.57%), Query Frame = 2
Query: 875 SELAWGRMLQCPDLTEPNSRDARRFRRRFRIPYPFFVEL--------------RHPFRRGCN----------TGCGELADSGERE*LR*YQPALLDKRVDCPKCVPHILQAFR*RYFFMSKLNS-LPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPIS--------TRTRKDPRLSHRRQR*TTRGG-YLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
S AW ++L+ DL +P S A++FR FR+PYPFF+ L R + R C+ T G G L + K V C + + F S+ N L R+ G+ +L P + G HI S + T K+ + + Q G L +G G+ NDK+I+ D+ V +R K Y + + KD + KG YLIVD Y +WR L+ +K + ++ + KRLESVRKDVECFFGILK RFRILKL + + + ++D V +TCCILHNMLH+ DG+ E D++W G L + H + + GT N ++ +VE ++R+L ++ YR ++ ++ WL
Sbjct: 61 STCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQK-VFHQFCEHFATEMYDEHIFLPSEENGELDRV--------------MGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 163 bits (412), Expect = 4.680e-40 Identity = 127/378 (33.60%), Postives = 179/378 (47.35%), Query Frame = 2
Query: 815 DEEDGS----HPKKQRRVYARPL*SELAWGRMLQCPDLTE-PNSRDARRFRRRFRIPYPFFVELRHPFRRG----CNTGCGELADSGER-------E*LR*-----YQPALLDKRVDCPKCVPHILQAFR*RY---FFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGY---------------LG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLD 1831
+EEDG PK +R V R L W RML+ DL + P++R+A++FRRRFR+PYPFF+ L + G T EL G R + LR Y + + V + F R+ FF + RMP++ + M+ M W P S R+ SH + GY L +G G NDK+IV+FDK VR G Y+ + Y L+ +D + EKG +LIV G Y W+ L + + + E + ++LE VRKD EC FG++KGRFRI K+ L+ + ++DN +TC ILHNML ++DG++L E DWAG DG LD
Sbjct: 4 EEEDGCDEEPRPKCRRTVRPRADDRALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGTRRCIPVEIDVLRILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWV----RMPNEDELKEIMKTYDEVGMTGAMGSMDGTHLQWTVCPYSERS------SH-----VGKEGYATLVYNVAVSHDMRVLSCTRGFPGAQNDKTIVKFDKFATEVRNGW-YKDVEYTLKGEDGGDIKEKGPWLIVGGGYHNWKQLQSPIRVPSTKAESGFKRQLEGVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNTFFTCMILHNMLLAYDGIELLEPYCDWAGADGDLD 365
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 152 bits (383), Expect = 5.380e-37 Identity = 79/208 (37.98%), Postives = 119/208 (57.21%), Query Frame = 2
Query: 1379 KGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTM--NFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
+G G+ NDK+IV +D V +R K Y + L ++D KG Y + D Y +W+ L+ +K + +++ + KRLESVRKDVECFFGILKGRFRILKL + + ++DNV +TCCILHNMLH+FDG+ + +W G+ E +FGT N ++ ++E G +R+L + YR ++ ++ WL
Sbjct: 124 EGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVN-----DQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig756.15546.1 >prot_H-paniculata_contig756.15546.1 ID=prot_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp MAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVback to top mRNA from alignment at H-paniculata_contig756:26120..30644+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig756.15546.1 ID=mRNA_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4525bp|location=Sequence derived from alignment at H-paniculata_contig756:26120..30644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig756:26120..30644+ >mRNA_H-paniculata_contig756.15546.1 ID=mRNA_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig756:26120..30644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |