mRNA_H-paniculata_contig756.15546.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig756.15546.1
Unique NamemRNA_H-paniculata_contig756.15546.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.230e-57
Identity = 158/472 (33.47%), Postives = 229/472 (48.52%), Query Frame = 2
Query:  662 GNMSSLRQDALEAAVDSAFAAASTVLTQLKD-ILASVYLIFEQSPRDYHGAEDEEDGSHPKKQRRVYARPL*SELAWGRMLQ------CPDLTEPNSRDARRFRRRFRIPYPFFVELRHPFRRGCNTGCGELADSGERE*---LR*YQPALLDKRVDCPKCVPHI-----------LQAFR*RYFFMSKLNSLPRMPSQPR*RRTM----RWASSGR*ARLMSPTSH---GVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
            G MSS    A+   V +AF+ A     Q +   L +  L+ +        +E+EE+ +   K+RRVY R   +   W   LQ         + +P SR ARRFR  FR+PYPFFVEL    ++      G+   SG R     L+      +  R +C   + H+              F  RYF          +P+    ++ M    R   SG  A   +  +H   G+ P++     T     P ++++     T+   L    G  G+ NDKSI+R+D  V  +RE   Y    + + + D      KG YL+VD  Y +W +L+  +K    + ++A+ KRLESVRKDVECFFGI+KGRFRILKL I + +   +DNV +TCCILHNMLHS+D     E + +WAG  GL +AW H           + S+   E VEVE GF   R++L+  + YR   N++AWL
Sbjct:   16 GTMSSSETGAVN--VPAAFSVALAAFNQQQQRTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFT-RYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSG--ATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKR-VLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 8.770e-53
Identity = 153/448 (34.15%), Postives = 220/448 (49.11%), Query Frame = 2
Query:  719 AAASTVLTQLKDILASVYLIFEQSPRDYHGAEDEEDGSHPKKQRRVYARPL*SELAWGRML---QCPDLTEPNSRDARRFRRRFRIPYPFFVEL------RHPFRRGCNTGCGELADSGERE*LR*YQ--------PALLDKRVDCPKCVPHILQAFR*RYFFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPT--SH---GVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
            A A+  L QL+  +A   +I E    D     ++++ S   K+RRVY R   ++  W + L   +    T+  +R+ARRFR  FR+PYPFFV L      R  F  G +   G  A   E + L   Q          +        + V      F  +YF     +    +P+    R+ M           +  T  +H   G+ P++   I T     P ++ +       G  L   +G  G  NDK+I+R+DK V  +R    Y    YKL  +D  +  EKG YL+VD  Y +WR+L+  +K    R ++ + KRLES RKDVEC+FGILKGRFRI KL I F +   +DNV +TCCILHNMLHSFD       + +WAG  GL +A    D   ++ + G + +G  E VEVE GF A+R +LV ++ YR E   ++ WL
Sbjct:   53 AVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFC-KYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQ-VTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 7.950e-52
Identity = 142/420 (33.81%), Postives = 206/420 (49.05%), Query Frame = 2
Query:  836 PKKQRRVYARPL*SELAWGRMLQCPDLTE-PNSRDARRFRRRFRIPYPFFVELRHPFRRG----CNTGCGELADSGERE*LR*YQPALLDKRV--------DCPKC-------VPHILQAFR*RYFFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPISTRTRK-----------DPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWL-HEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWLRS 1999
            PK++R V  R     L W RML+  DL + P++R+A++FRRRFR+PYPFF+ L    + G      T   EL   G R  +      L   R+        D  +        V H+   F  R F         RMP++   +  M+       +  M         W   P S R+             +  +SH  +        L   +G  G  NDK+I++FDK   AVR G  Y+ + Y L+ +D  +  EKG +LIVDG Y  W+ L    +  + + E  + ++LESVRKD EC FG++KGRFRI K+  L+ +  ++DN+ +TC ILHNML ++DG++L E D DWAG DG LD  + H    M+  T+          VE +DGF A+R++LV ++ YR     V W RS
Sbjct:   49 PKRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTER-FACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMR-------VLSCTRGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTH------EDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 5.780e-50
Identity = 90/204 (44.12%), Postives = 123/204 (60.29%), Query Frame = 2
Query: 1382 GMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
            G  G+ NDKSI+R+D  V  +RE   Y    + + + D      KG YL+VD  Y +W +L+  +K    + ++A+ KRLESVRKDVECFFGI+KG FRILKL I + +   +DNV +TCCILHNMLHS+D     E + +WAG  GL +AW H           + S+   E VEVE GF   R++L+  + YR   N++AWL
Sbjct:   37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 4.220e-46
Identity = 97/213 (45.54%), Postives = 130/213 (61.03%), Query Frame = 2
Query: 1358 GGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
            G  L   +G  G  NDK+I+R+DK V  +R    Y    YKL  +D  +  EKG YL+VD  Y +WR+L+  +K    R ++ + KRLES RKDVEC+FGILKGRFRI KL I F +   +DNV +TCCILHNMLHSFD       + +WAG  GL +A    D   ++ + G + +G  E VEVE GF A+R +LV ++ YR E   ++ WL
Sbjct:  195 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.270e-44
Identity = 87/225 (38.67%), Postives = 126/225 (56.00%), Query Frame = 2
Query: 1358 GGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRT--MNFGTNG-----------RNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWL 1993
            G  L    G  G  NDK+I+R+D  V  +R    Y    YKLR  +  E+  +G +LI+D  Y  W +L+  +K   + ++ A+ + LESVRKDVECFFGILKGRFRILKL + + +   +DN+ +TCCILHNMLH+FDGL + + + DW G  G  DAW H+  T   + G+ G               G   R E       ++R+L+  + +R + N++ WL
Sbjct:   29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.650e-44
Identity = 137/412 (33.25%), Postives = 196/412 (47.57%), Query Frame = 2
Query:  839 KKQRRVYARPL*SELAWGRMLQCPD--LTEPNSRDARRFRRRFRIPYPFFVELRHPFR----RGCNTGCGELADSGERE*LR*YQPALLDKRV--DCPKC-------VPHILQAFR*RYF--FMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTS--HGVAP--WHHIPISTR----TRKDPRLSHRRQR*TTRGGYLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEVAWLRS 1999
            K++R VY RP     AW  ML+  +  L +P ++DAR FRRRFR+PYP F+EL    +    +G  T   +L   G R  +      L       D P+        +  +   F  R+   F  K    P+        R  +    G  A  M  T   +  AP    H  +          +    H+ +        LG  K   G +NDK+IV FD+ V+ ++     + + + L  +D  E  E+GLYLIVDG Y +        +    ++E+A+ K+LESVRKD+ECFFGILKGRFRILK+P+L+    ++D +  TCC LHNMLHS+DGL L E D +WAG DG LD W+      +   N       P+    ED F  ++ +LV +     +   V W RS
Sbjct:   53 KRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLR-------CLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHKCP-----VQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 3.590e-41
Identity = 127/408 (31.13%), Postives = 190/408 (46.57%), Query Frame = 2
Query:  875 SELAWGRMLQCPDLTEPNSRDARRFRRRFRIPYPFFVEL--------------RHPFRRGCN----------TGCGELADSGERE*LR*YQPALLDKRVDCPKCVPHILQAFR*RYFFMSKLNS-LPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPIS--------TRTRKDPRLSHRRQR*TTRGG-YLG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
            S  AW ++L+  DL +P S  A++FR  FR+PYPFF+ L              R  + R C+          T  G     G    L       + K V    C     + +    F  S+ N  L R+               G+  +L  P + G     HI  S        + T K+ + +   Q      G  L   +G  G+ NDK+I+  D+ V  +R  K Y    + +  KD   +  KG YLIVD  Y +WR L+  +K   +  ++ + KRLESVRKDVECFFGILK RFRILKL + + +  ++D V +TCCILHNMLH+ DG+   E D++W G   L +   H   + + GT   N     ++ +VE     ++R+L  ++ YR ++  ++ WL
Sbjct:   61 STCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQK-VFHQFCEHFATEMYDEHIFLPSEENGELDRV--------------MGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.680e-40
Identity = 127/378 (33.60%), Postives = 179/378 (47.35%), Query Frame = 2
Query:  815 DEEDGS----HPKKQRRVYARPL*SELAWGRMLQCPDLTE-PNSRDARRFRRRFRIPYPFFVELRHPFRRG----CNTGCGELADSGER-------E*LR*-----YQPALLDKRVDCPKCVPHILQAFR*RY---FFMSKLNSLPRMPSQPR*RRTMRWASSGR*ARLMSPTSHGVAPWHHIPISTRTRKDPRLSHRRQR*TTRGGY---------------LG*RKGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLD 1831
            +EEDG      PK +R V  R     L W RML+  DL + P++R+A++FRRRFR+PYPFF+ L    + G      T   EL   G R       + LR      Y   + +        V  +   F  R+   FF   +    RMP++   +  M+          M         W   P S R+      SH       + GY               L   +G  G  NDK+IV+FDK    VR G  Y+ + Y L+ +D  +  EKG +LIV G Y  W+ L    +  + + E  + ++LE VRKD EC FG++KGRFRI K+  L+ +  ++DN  +TC ILHNML ++DG++L E   DWAG DG LD
Sbjct:    4 EEEDGCDEEPRPKCRRTVRPRADDRALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGTRRCIPVEIDVLRILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWV----RMPNEDELKEIMKTYDEVGMTGAMGSMDGTHLQWTVCPYSERS------SH-----VGKEGYATLVYNVAVSHDMRVLSCTRGFPGAQNDKTIVKFDKFATEVRNGW-YKDVEYTLKGEDGGDIKEKGPWLIVGGGYHNWKQLQSPIRVPSTKAESGFKRQLEGVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNTFFTCMILHNMLLAYDGIELLEPYCDWAGADGDLD 365          
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 5.380e-37
Identity = 79/208 (37.98%), Postives = 119/208 (57.21%), Query Frame = 2
Query: 1379 KGMAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIVDGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRILKLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDAWLHEDRTM--NFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENN-EVAWL 1993
            +G  G+ NDK+IV +D  V  +R  K Y    + L ++D      KG Y + D  Y +W+ L+  +K   + +++ + KRLESVRKDVECFFGILKGRFRILKL + +    ++DNV +TCCILHNMLH+FDG+     + +W    G+      E      +FGT   N     ++ ++E G    +R+L   + YR ++  ++ WL
Sbjct:  124 EGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVN-----DQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig756.15546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE2.230e-5733.47Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE8.770e-5334.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE7.950e-5233.81Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE5.780e-5044.12DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE4.220e-4645.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM6_9PHAE1.270e-4438.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE1.650e-4433.25DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE3.590e-4131.13Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLF8_9PHAE4.680e-4033.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE5.380e-3737.98DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig756contigH-paniculata_contig756:26120..30644 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue6.3e-34
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2396
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig756.15546.1prot_H-paniculata_contig756.15546.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig756 29043..30265 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930929.716406-UTR-H-paniculata_contig756:26119..271081622930929.716406-UTR-H-paniculata_contig756:26119..27108Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 26120..27108 +
1691481515.098688-UTR-H-paniculata_contig756:26119..271081691481515.098688-UTR-H-paniculata_contig756:26119..27108Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 26120..27108 +
1622930929.7335982-UTR-H-paniculata_contig756:28647..290421622930929.7335982-UTR-H-paniculata_contig756:28647..29042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 28648..29042 +
1691481515.1108441-UTR-H-paniculata_contig756:28647..290421691481515.1108441-UTR-H-paniculata_contig756:28647..29042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 28648..29042 +
1622930929.8105454-UTR-H-paniculata_contig756:30265..306441622930929.8105454-UTR-H-paniculata_contig756:30265..30644Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 30266..30644 +
1691481515.1400871-UTR-H-paniculata_contig756:30265..306441691481515.1400871-UTR-H-paniculata_contig756:30265..30644Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig756 30266..30644 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930929.7572534-CDS-H-paniculata_contig756:29042..292101622930929.7572534-CDS-H-paniculata_contig756:29042..29210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig756 29043..29210 +
1691481515.1225624-CDS-H-paniculata_contig756:29042..292101691481515.1225624-CDS-H-paniculata_contig756:29042..29210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig756 29043..29210 +
1622930929.7905693-CDS-H-paniculata_contig756:29800..302651622930929.7905693-CDS-H-paniculata_contig756:29800..30265Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig756 29801..30265 +
1691481515.1314101-CDS-H-paniculata_contig756:29800..302651691481515.1314101-CDS-H-paniculata_contig756:29800..30265Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig756 29801..30265 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig756.15546.1

>prot_H-paniculata_contig756.15546.1 ID=prot_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MAGTVNDKSIVRFDKTVQAVREGKPYRSMAYKLRDKDDVEQVEKGLYLIV
DGEYLRWRSLVGLAKEVAAREEVAWIKRLESVRKDVECFFGILKGRFRIL
KLPILFGESAQVDNVVWTCCILHNMLHSFDGLKLHESDMDWAGPDGLLDA
WLHEDRTMNFGTNGRNSNGPPERVEVEDGFFAMRRRLVMHYTYRVENNEV
AWLRSQSGQK*
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mRNA from alignment at H-paniculata_contig756:26120..30644+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig756.15546.1 ID=mRNA_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4525bp|location=Sequence derived from alignment at H-paniculata_contig756:26120..30644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCCTTTACAATGCTTAGGGGTTAGCTGGTTTTGGAAGATGACACACCT CGAATACTTTGGTCATCATCTAATTTTCGAGATTGCTTTTTGCGCCGGTT CCCGATCTAAAAAATAACTCTCGACTTAGAAAAATATAGGAACATATTGC CCATGACTTGCTACAAGGATGCGTAGCCACTGCTTTCCGGGTACAGACAA GCGGTCTAGTGCAGAGAACTAAACTAGTACACAGAGTACACACATGTATT TTGTGTGTTTTTCTTCATCATATTTTCTTTTATCACATAGTAGAATCCCG TTGGTCATAGATTGCTGGGTCGTAAAGCAAGCGAGCAGCCGAGGAGCAGC AGTGGTAGATACAGAGGGTCTACACTCTGGGGTGGAAAGGAAAGGAAAGG AGCAGCACGAGTATCAATGAGCCTGTGCGAACCGCAGCGTAAAATATTTT TAGTGCAGATGGTCCATCAGTGATGACCAATACTGCATGTACTTGTTGTC GGGAAAGCGTTCAGATACAAGCGTTTTCCACGAAAAAGCCGGCTTCTATG TTCTACGAGTGAGTGTCACCTTTGCAGTACTACAAGCACCCAATTTTTTC ATTTGGCGCGCGTATTTAAATTTAAATCACGGGAGGTGAATACCGCACAC AATAGGCTTCTGGCAACATGAGCTCTCTCCGTCAAGATGCACTTGAGGCA GCTGTTGACTCAGCTTTCGCAGCTGCCTCGACAGTGTTAACACAGTTGAA AGACATTTTAGCGTCTGTATATCTCATATTCGAGCAATCTCCGCGCGATT ATCATGGTGCTGAAGATGAAGAAGATGGGTCACACCCAAAGAAGCAGAGA AGGGTGTATGCTCGGCCGCTGTAGAGTGAATTGGCGTGGGGAAGGATGCT GCAGTGCCCCGATCTCACGGAACCCAATTCGAGAGACGCTCGCCGCTTCA GGAGGCGCTTTCGTATACCCTACCCTTTCTTCGTGGAGCTGATGAAGGTG TGATTTCCGAAGAGAGAGGGACACGTGGATGTCGCCGGTCGCCGAATGGT TCCTGTGGAACTGAAGGGAAGCAGCACGACAACACGCGATCTCGCAACCA GTGTTTCACGCTTGTTGTGCCTAATCATGCACCTGGATAGGTCATGCTTT GTGTCGTACGTGGTAGCCAATTTCCCTCAGTTTGCTGTTGTATTGAAATG CTGTCTTATTCTTGGTGTCTTCCACCATACAGTGCTGCCTCAGATGTGCT TGACTGCACAGACGGTAAGATCTGTGTCTTGTCACTGTGCATGACAGAAG TCATCCTCTAATTTACAGTTCAGTAGAACTGTGATGATGCGAAGCTAACT TATAATGCACATTACTGTAGTGTTTGGCCTCATTCCTGTGCAGTACAACC TGTACTGTCCTCGAACATACCGTGGTACAAGAAGTATGGCCCTGCGAAGC TGTAGTACTTTGAATAATATGATGGTGCTGACTAATAAAAATAACCTTGT TTTCAAAGAAACATTTTCTCATCCAAGGCTGCCGAATCAGCCAGGGTGCC GGGGATACACATCGAAGCACTTCACCGCCTCGACAACATGCCGTCGGAAA AATTCAAATTGGGCAACATTCAGTTATCCGACAAGGTTAAGGTTACCCGT TAAAAAAATGTGGCATTTATTCGTGGTCATTGTAAATACTGTATTTTCTC TTTTTTTGTTTCGGCAAGGTGTGCTGCGCACACCTGCCGAGAATCGTCGT TTCGTCATTAGCTTTGCTAGGCAAGGAATATCCAGACCGCCCAATTGACG CGGTGAGCTTGTACCTTAAGCATGACGCGCAATGCAGTACAGGATCTCTC TAATCGTTTGTTGTTCGATTTTGCTGTGGGTGCATTAGATGGTTTTGTTT GTTTATCGGTAAGTTCGATGGGTTACCCTGTTCAATTTCCCTCTTGTTAT GGTCCTTCTCTCTCACGAGCTTACATTGCCAGAGGATGAGTTACGAATTG TACACAATGGTCACACACCACGGAAGAAAATGCCAGGATGACATTTGCTG TGGATTATCTTCCGTAGGGTGTCTTAGGCCCATTAGAACAATGTCACCTT GCCTTGGTAAGGGCGATTGGTCTTCGATAAGCTGAGGTGCGTCGTTGCAT ATATTCGTTTTCAGCGAGGCCATCGCACTGGGGAAATGAGCGTCATCAAT CAATTTTCTCTATCATATTTCGCTATCCACGGACCTACGCCCGAACGGGT AGGGTAGCTTGTGAACTGAGTATGACTGGATGTCTAGTCAGAGGTCTTTT AGTGGGTGCAACTCCCACACTGCCTACCTGATTCATCCGAACCGGGGTGG CGCCTACCCCGCACAGGAACAAATAACTCTGTTCTGTTAAAGGAAATGTA GAAATACTTCGGTATGGAACATTCGGATAAAGGTTTTTGCCTTAGCCTTC CCGGGGTTAAATATGTATATATATATATATATATCGCTATCCCAGCCGCT GTCCGTATGGCCAAGTGTTTCATGCGATTCCGTCACCCCTTCCGTCGCGG CTGTAACACAGGTTGTGGCGAGCTTGCAGATTCTGGGGAGAGGGAATAGC TTCGATGATATCAGCCAGCTCTCCTTGATAAGCGAGTCGACTGCCCAAAG TGCGTTCCACATATTTTGCAAGCGTTTCGCTGAAGATATTTTTTCATGAG TAAATTAAACTCCCTACCGAGGATGCCCTCGCAGCCACGATGAAGGCGTA CGATGCGGTGGGCTTCATCGGGACGGTAGGCTCGACTGATGTCACCCACA TCGCATGGGGTTGCACCCTGGCATCACATACCCATCTCTACACGGACAAG GAAGGATCCCCGACTCTCCCATAGGAGGCAACGGTAGACCACTCGGGGCG GGTATTTGGGATGACGGAAAGGAATGGCCGGAACAGTGAACGATAAGTCC ATCGTTCGTTTCGACAAAACAGTTCAAGCAGTCAGGGAGGGTAAGCCATA CAGGTCGATGGCTTACAAGCTCCGCGATAAGGACGACGTGGAACAGGTGG AGAAGGGTCTTTACCTCATCGTCGACGGAGAATATCTCCGGGTGAGTCAC CTGCTGTTGTTTGATGGTCATTGCTGCTGCACCACCCTACGGAAATGCGT TTTATAGTTTTAGGCTACGCGGTAACAAATTCTTCATTTCTGACAGGCAT ATCAACCACACCTCACCTACGAAGCCCGACTTTGTTGATCCCAACATAAA CGGCTGCCCGAGGTTCCATTTTGTGAGCCGCAGCTCTAGACTCACCGGAA ATTTGATTCATATATTACCGCCAGACGAGGTGCAAACTATGAGACAGCAA GTTTCCTTAATGTAGGTAGCAGCTGCGCAAAATCAGTAGGTCGTACCACG TGGCGTATCTTGTTTAAAGCGCAGGCCATGCCACCATTGACAAGGACTTT GCTAGGATGATAAGACGCTTCTGTTTATCTTTTTATGGTCGATTTCAACC GTCGGTGTTGTTAATGTCGTCTTCAGCCTCAATTTCCTCTGTACCGCTGA GTGATCACTGATCAAGGCTGAAATAGATCGTACGAGCCGAGCGTTTCAAT ATCTGACACGGCTGGCCAGACGCCGCATAAGAACAACGTATATCGACACC ACTGTTTTCTCGTTTCCCCTCTTGTTTGCAGTGGAGGAGTCTAGTGGGCC TGGCAAAAGAAGTTGCAGCTCGAGAGGAAGTAGCGTGGATTAAACGTCTC GAGAGCGTTCGAAAGGACGTGGAATGCTTCTTCGGCATTCTCAAGGGCCG CTTCAGAATTTTGAAGCTGCCCATTCTTTTCGGGGAGTCCGCTCAGGTAG ATAACGTGGTCTGGACATGCTGTATCCTTCACAACATGCTGCATTCGTTC GATGGACTGAAGTTGCACGAGTCAGATATGGACTGGGCCGGGCCGGATGG CCTCCTTGACGCGTGGCTTCACGAAGATCGCACAATGAACTTTGGCACGA ACGGTCGCAATTCAAACGGGCCGCCAGAGCGCGTCGAAGTCGAAGACGGT TTTTTCGCCATGAGAAGGAGGCTAGTGATGCACTACACATACAGGGTGGA AAACAACGAAGTGGCTTGGCTGCGGTCGCAATCTGGTCAGAAGTGATTTG AGCGTGTAGATTGGGCATGGTGCTGTATGGATTTCATGTGTCGTGACGAT TTGTGTTGTGATGTTTGAGGCTTTGGTTAGCAGGATGAACTGTAGCAAGC GACGTAATTGTCGGCCGTCTTGAATGAATGGCATATGGGCACGGAATGGC CGCCACAGCATTTTTGCTAGGCATGATATGGCCCGCTCTGACTTTAAATG TTATCATGATTAATTTTGCTGGGATGCTGATTGTATTAAAATCCAAGTCT TCTTCCCTGTACGCAGTAGAGGCCTGTTGAGATGACTGTGTGTCTAAGTG GTTCATGAAATGTTTCATACATATATCGAGCGCTACTGCGCAGCTAATGA TTGACGGAATATTTGATCTGTGTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig756:26120..30644+

>mRNA_H-paniculata_contig756.15546.1 ID=mRNA_H-paniculata_contig756.15546.1|Name=mRNA_H-paniculata_contig756.15546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig756:26120..30644+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGGAACAGTGAACGATAAGTCCATCGTTCGTTTCGACAAAACAGT
TCAAGCAGTCAGGGAGGGTAAGCCATACAGGTCGATGGCTTACAAGCTCC
GCGATAAGGACGACGTGGAACAGGTGGAGAAGGGTCTTTACCTCATCGTC
GACGGAGAATATCTCCGGATGGCCGGAACAGTGAACGATAAGTCCATCGT
TCGTTTCGACAAAACAGTTCAAGCAGTCAGGGAGGGTAAGCCATACAGGT
CGATGGCTTACAAGCTCCGCGATAAGGACGACGTGGAACAGGTGGAGAAG
GGTCTTTACCTCATCGTCGACGGAGAATATCTCCGGTGGAGGAGTCTAGT
GGGCCTGGCAAAAGAAGTTGCAGCTCGAGAGGAAGTAGCGTGGATTAAAC
GTCTCGAGAGCGTTCGAAAGGACGTGGAATGCTTCTTCGGCATTCTCAAG
GGCCGCTTCAGAATTTTGAAGCTGCCCATTCTTTTCGGGGAGTCCGCTCA
GGTAGATAACGTGGTCTGGACATGCTGTATCCTTCACAACATGCTGCATT
CGTTCGATGGACTGAAGTTGCACGAGTCAGATATGGACTGGGCCGGGCCG
GATGGCCTCCTTGACGCGTGGCTTCACGAAGATCGCACAATGAACTTTGG
CACGAACGGTCGCAATTCAAACGGGCCGCCAGAGCGCGTCGAAGTCGAAG
ACGGTTTTTTCGCCATGAGAAGGAGGCTAGTGATGCACTACACATACAGG
GTGGAAAACAACGAAGTGGCTTGGCTGCGGTCGCAATCTGGTCAGAAGTG
ATGGAGGAGTCTAGTGGGCCTGGCAAAAGAAGTTGCAGCTCGAGAGGAAG
TAGCGTGGATTAAACGTCTCGAGAGCGTTCGAAAGGACGTGGAATGCTTC
TTCGGCATTCTCAAGGGCCGCTTCAGAATTTTGAAGCTGCCCATTCTTTT
CGGGGAGTCCGCTCAGGTAGATAACGTGGTCTGGACATGCTGTATCCTTC
ACAACATGCTGCATTCGTTCGATGGACTGAAGTTGCACGAGTCAGATATG
GACTGGGCCGGGCCGGATGGCCTCCTTGACGCGTGGCTTCACGAAGATCG
CACAATGAACTTTGGCACGAACGGTCGCAATTCAAACGGGCCGCCAGAGC
GCGTCGAAGTCGAAGACGGTTTTTTCGCCATGAGAAGGAGGCTAGTGATG
CACTACACATACAGGGTGGAAAACAACGAAGTGGCTTGGCTGCGGTCGCA
ATCTGGTCAGAAGTGA
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