mRNA_H-paniculata_contig7559.15544.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: D7G8X0_ECTSI (Mitochondrial carrier protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X0_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 2.120e-135 Identity = 207/274 (75.55%), Postives = 234/274 (85.40%), Query Frame = 1
Query: 1 HLVRDLKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAM--GAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGM-AGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAPPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
HLVRD+KMA+AGA+ IATA LFPIDTAKTLRQANP F GTRDALAH+CR TRGP ++YTG+PTAV+GAMPSSALYFGTYEAVKTRL+ A FPA G G G HPAARAAAH AACGNAASSL+FVPKE+VKQ+LQASGM A GG RETA++IV+R ++EKGV+GLYRGYWATLSRN+PSA+IRFSLYEEIKL +GPA+L SAPP ++LAGALAGACASG+TTPFDVLKTRVATGSL+G RGFA NMA IVA+DGWKGLY
Sbjct: 20 HLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICR-TRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAAGGARETAKEIVRRTVKEKGVKGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARLMSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFAKNMATIVADDGWKGLY 292
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A6H5JI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI22_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 1.220e-132 Identity = 206/274 (75.18%), Postives = 233/274 (85.04%), Query Frame = 1
Query: 1 HLVRDLKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAM--GAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGM-AGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAPPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
HLVRD+KMA+AGA+ IATA LFPIDTAKTLRQANP F G+RDALAH+CR TRGP ++YTG+PTAV+GAMPSSALYFGTYEAVKTRL+ A FPA G G G HPAARAAAH AACGNAASSL+FVPKE+VKQ+LQASGM A GG RETA++I++R +REKGVRGLYRGYWATLSRN+PSA+IRFSLYEEIKL +GPA+L SAPP ++LAGALAGACASG+TTPFDVLKTRVATGSL+G RGF NMA IVA+DGWKGLY
Sbjct: 148 HLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGSRDALAHICR-TRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAVGGARETAKEIIRRTVREKGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARLMSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFVKNMATIVADDGWKGLY 420
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A836CFD2_9STRA (Mitochondrial carrier protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD2_9STRA) HSP 1 Score: 255 bits (652), Expect = 2.770e-81 Identity = 153/270 (56.67%), Postives = 187/270 (69.26%), Query Frame = 1
Query: 22 MALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGMAG--GGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAP----PVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
MALAGA+ I+T L PIDTAKTLRQ+NP F GT AL+H+ + T GP S+Y G+ AV+G+MPSSALYFG YE+VK RL AA + + G G A P RA H AACGNAASSLVFVPKE+VKQSLQA A G A +V+ LR++G+RGLYRGYWATLSRN+PSA++RF+LYEEIKL + P LA+ P P F+LAGA+AGA ASGLTTPFDV+KT+VATG LD + G ++ + E G +GLY
Sbjct: 1 MALAGAMAGAISTVTLHPIDTAKTLRQSNPQAFKGTIQALSHMLK-THGPGSIYAGVGAAVVGSMPSSALYFGAYESVKARLTRAAGRRW-------GGGSAQLVLPPGVRAGVHVISAACGNAASSLVFVPKEYVKQSLQAQKGAAMRGQATLNAVALVKATLRQQGIRGLYRGYWATLSRNVPSAILRFTLYEEIKLHLRP-NLANMPGKLSPAFLLAGAVAGAVASGLTTPFDVVKTQVATGRLDRNLGVIKSLTKLGREGGIRGLY 261
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A7S2STS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS4_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.820e-56 Identity = 129/277 (46.57%), Postives = 162/277 (58.48%), Query Frame = 1
Query: 16 LKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGA--------GSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQAS----GMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAPPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGL 810
L+ ALAGA+ + +L P+DT KTLRQ +P + T AL+ R TRG ++Y G+ A IGAMPSSALYFG Y+ VK RL T+ D + + G GS R H A CGNAASSLVFVPKEFVKQ LQ + G+ G A Q+V ++ KGV +Y GY ATL RNIPSA IRF +YEE K+L+ + P F LAGA++G AS TTP DV+KT+ ATG+LD SRG T +A +V +G GL
Sbjct: 30 LRSALAGAIAGGVTNTILHPLDTCKTLRQRHPQQYKSTLAALSSTLR-TRGIGALYRGVIPAAIGAMPSSALYFGFYDIVKRRL----TRFVANRDQQVNSRGGXXXXXXQGGSPLESGIRPVVHMTAAVCGNAASSLVFVPKEFVKQQLQTNTKYRGLGG------AFQVVAHTVKTKGVGAVYAGYTATLLRNIPSAAIRFVIYEEAKILLESRLGSVGPREFFLAGAVSGLVASSCTTPMDVMKTKFATGALDRSRGLLTCVAEVVRREGAVGL 295
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A7R9UPS8_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UPS8_DIALT) HSP 1 Score: 186 bits (472), Expect = 5.410e-54 Identity = 118/268 (44.03%), Postives = 161/268 (60.07%), Query Frame = 1
Query: 13 DLKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKL-LVGPAKLASAPPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
D + L+G+L + +L P+DT KT+RQAN F GT + + ++ GP +Y GL TA++GAMPSS ++FGTYE +K RL A K PD C RA H AACGNAASSL+FVPKE VKQ LQA+ +AG V RQ+V ++E GVRGLY Y AT+ RNIP+ V++F +YEE++L L + A+ M GA++GAC+S L TP DV+KTR+ATG + G ++ + E+G GL+
Sbjct: 20 DFRRGLSGSLAGALTNGLLHPLDTVKTVRQANRAQFPGTFRTIRRIWQQN-GPRGLYGGLGTAMVGAMPSSFVFFGTYEFMKARLQ--ALK----PD-----------CSLDERARIHVVSAACGNAASSLIFVPKEMVKQRLQAARVAG--VSTGVRQVVSTIVKEHGVRGLYAAYSATIMRNIPTTVLKFLIYEELRLRLAASDESATLRVRSMACGAISGACSSVLMTPLDVVKTRLATGQYAATLGMRRSLVKLATEEGLSGLF 267
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A7S2DQE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQE7_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.300e-52 Identity = 119/243 (48.97%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 13 DLKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQ-ASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAPPV-----FMLAGALAGACASGLTTPFDVLKT 723
D++ ALAG L T +L P+DTAK LRQ NP + GT AL V R RG +Y+GL + +G++PSSALYFGTYE VK RL A A D + A R A H AA GNA SSL+FVPKEFVKQ LQ AS + GG T +++ L+ +G+ GLY GY ATL RNIPSA IRF LYEE+K+L G AS + F+LAGA++G +SG+TTP DV+KT
Sbjct: 23 DIRSALAGGLAGSFTTGILHPLDTAKVLRQKNPTQYAGTLQALV-VTARERGIRPLYSGLWASALGSLPSSALYFGTYECVKRRLYALARGCQDAQDEGVARVSA------RVRPAIHLVSAASGNAVSSLLFVPKEFVKQQLQTASALTNGGKASTL-GVIRTTLKTRGIGGLYAGYGATLLRNIPSAGIRFILYEELKVLFG----ASCDDINSSLKFLLAGAMSGIVSSGITTPMDVIKT 253
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A4D9D8F7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F7_9STRA) HSP 1 Score: 181 bits (458), Expect = 8.340e-52 Identity = 127/276 (46.01%), Postives = 155/276 (56.16%), Query Frame = 1
Query: 19 KMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSG------CHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKL-----ASAPPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
++ALAGAL + VL+PID AKTLRQA P +R A R G S++ GL AV+G+MPSSALYFG YE VK RL+ P + + GS R AH AA GN ASSL+FVPKE +KQ LQ A GG + LREKGVRGLY GY ATL RNIPSAV+RF+LYEE KL +G L S P V ++AGALAGA +S TTP DV+KTR+A + R + + ++G GLY
Sbjct: 6 RLALAGALAGGFSNMVLYPIDVAKTLRQAGP----ASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIR---PRTEASSSVSSDGSKELYQRRAQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALWGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLY 274
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: W7TPC7_9STRA (S-adenosylmethionine carrier 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC7_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.110e-51 Identity = 127/274 (46.35%), Postives = 159/274 (58.03%), Query Frame = 1
Query: 19 KMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSGCHPAA----RAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASA-----PPVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
++ALAGAL + VL+PID AKTLRQA P +R A R G S++ GL AV+G+MPSSALYFG YE VK RL +A + ++ + G+ H R AH AA GN ASSL+FVPKE +KQ LQ A GG + LREKGVRGLY GY ATL RNIPSAV+RF+LYEE KL +G L+ A P V ++AGALAGA +S TTP DV+KTR+A + R + + ++G GLY
Sbjct: 113 RLALAGALAGGFSNMVLYPIDVAKTLRQAGP----ASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRL-VAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLY 381
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A448Z9E8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9E8_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.940e-45 Identity = 123/281 (43.77%), Postives = 152/281 (54.09%), Query Frame = 1
Query: 16 LKMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKT---RLLIAATKAFPAPDGAMGAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQ--ASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKL--LVGPAKLASAPPVFM--------LAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
L++ALAG L +AVL+PID+AKTLRQ+NP + RDAL + + VY G+ A +GA+PSSALYFG YE+ K RL+ D AR H AA GN SS VFVPKE +KQ LQ AS G V Q + +R+ G+ GLY GY ATL RNIPSA IRF LYEE+K P+ + + P LAGA+AGA +S TP DV+KTR+ATGS G + M +V E GWKGLY
Sbjct: 116 LRIALAGGLAGATGSAVLYPIDSAKTLRQSNPTAYSSVRDALWTMLKSKNALRRVYRGILPAALGAIPSSALYFGAYESSKVTLKRLVFQKNHKNVDSDDYR------------ARLFVHGLAAASGNVISSFVFVPKEVIKQQLQIRASEATTGTV-----QAIGSIVRQNGISGLYAGYGATLLRNIPSATIRFVLYEELKRKWATAPSGESGSSPQTQKLRAAGTFLAGAVAGATSSFAMTPIDVVKTRMATGSCP--LGVRSCMLHVVGEVGWKGLY 377
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Match: A0A2V3J0Y3_9FLOR (Protein MITOFERRINLIKE 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Y3_9FLOR) HSP 1 Score: 163 bits (412), Expect = 6.610e-45 Identity = 109/270 (40.37%), Postives = 147/270 (54.44%), Query Frame = 1
Query: 19 KMALAGALXXXIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPLSVYTGLPTAVIGAMPSSALYFGTYEAVKTRLLIAATKAFPAPDGAMGAGGAGSGCHPAARAAAHXXXAACGNAASSLVFVPKEFVKQSLQASGMAGGGVRETARQIVQRALREKGVRGLYRGYWATLSRNIPSAVIRFSLYEEIKLLVGPAKLASAP-----PVFMLAGALAGACASGLTTPFDVLKTRVATGSLDGSRGFATNMAVIVAEDGWKGLY 813
++A AG + + +L P+DT KT+RQA+P F G L + R TRGP ++Y G+ A+IG+ SSALYFG YE VK L + +F P R AACGN ASS++FVPKE VKQ +Q S + G A+ + L G+ GLYRGY ATL RNIPS ++RF++YEE KL + K ++ P + AG++AG +S TTP DVLKTR ATG++ + IV DG GL+
Sbjct: 21 RLAAAGGMAGMLTNTLLHPLDTVKTVRQADPTHFRGMAPTLLKIIR-TRGPFALYAGIVPALIGSAFSSALYFGAYEMVKGALAQMSPYSFQ---------------KPRTRIPLTALSAACGNVASSVLFVPKEVVKQRMQ-SAVDPGNFFGAAKNV----LAASGISGLYRGYKATLLRNIPSTMLRFAIYEEAKLAIRRLKRENSDKPLTFPEVIAAGSIAGVASSACTTPMDVLKTRFATGAIKPGTAILPAIRDIVGRDGVPGLF 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7559.15544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7559.15544.1 >prot_H-paniculata_contig7559.15544.1 ID=prot_H-paniculata_contig7559.15544.1|Name=mRNA_H-paniculata_contig7559.15544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp MALAGALAGAIATAVLFPIDTAKTLRQANPHVFHGTRDALAHVCRRTRGPback to top mRNA from alignment at H-paniculata_contig7559:388..10522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7559.15544.1 ID=mRNA_H-paniculata_contig7559.15544.1|Name=mRNA_H-paniculata_contig7559.15544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10135bp|location=Sequence derived from alignment at H-paniculata_contig7559:388..10522- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7559:388..10522- >mRNA_H-paniculata_contig7559.15544.1 ID=mRNA_H-paniculata_contig7559.15544.1|Name=mRNA_H-paniculata_contig7559.15544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig7559:388..10522- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |