mRNA_H-paniculata_contig75539.15537.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: E6ZET0_ECTSI (NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Ectocarpales TaxID=2877 RepID=E6ZET0_ECTSI) HSP 1 Score: 384 bits (985), Expect = 2.550e-130 Identity = 197/202 (97.52%), Postives = 200/202 (99.01%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A1I9LW78_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW78_9PHAE) HSP 1 Score: 372 bits (956), Expect = 6.310e-126 Identity = 188/202 (93.07%), Postives = 200/202 (99.01%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYLF+GSTNYE+LAT+SFS+YDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLG+VYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGTVIG+EAAILQSLSHGFVSSALFLIIGVLYDR+HSRV+KYY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLFSGSTNYETLATISFSSYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGIVYTSLTAIRQTDLKRLIAYTSVAHMNLVIIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRFHSRVIKYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: D0IPZ5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=74 Tax=Phaeophyceae TaxID=2870 RepID=D0IPZ5_9PHAE) HSP 1 Score: 370 bits (950), Expect = 5.110e-125 Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYLFAGSTNYE L+ ++FS YDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFP ASVYFTPF+FSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLFAGSTNYEILSVINFSPYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: Q8LWY6_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Laminariales TaxID=2886 RepID=Q8LWY6_9PHAE) HSP 1 Score: 362 bits (930), Expect = 5.630e-122 Identity = 185/203 (91.13%), Postives = 195/203 (96.06%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAG-SVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYLFAGSTNYE+L+ ++FS+YDQKWLW AFFASFAAKVPMLPVHIWLPEAHVEAPTAG +ILAGILLKLGSYGFLRFSLGLFP ASVYFTPF+FSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQ LSHGFVSSALFLIIGVLYDRWHSRVVKYY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLFAGSTNYEALSVINFSSYDQKWLWFAFFASFAAKVPMLPVHIWLPEAHVEAPTAGFKIILAGILLKLGSYGFLRFSLGLFPLASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQRLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLP 384
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: Q2TUA4_DICDH (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA4_DICDH) HSP 1 Score: 361 bits (926), Expect = 2.070e-121 Identity = 182/202 (90.10%), Postives = 195/202 (96.53%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IY F+G++NYE L+T+ FS Y Q+WLWLAFFASFAAKVPMLP HIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFS GLFPEASVYFTPF+FSLSLLGVVYTSLTAIRQTDLKRL+AYTSVAHMNLV+IGLFTG+++GVEAA+LQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP
Sbjct: 182 IYHFSGTSNYEILSTIEFSEYSQRWLWLAFFASFAAKVPMLPFHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSWGLFPEASVYFTPFIFSLSLLGVVYTSLTAIRQTDLKRLVAYTSVAHMNLVVIGLFTGSILGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A2R4QQ88_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ88_9PHAE) HSP 1 Score: 361 bits (926), Expect = 2.200e-121 Identity = 181/202 (89.60%), Postives = 195/202 (96.53%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYL GST+YE+L+ + FS+Y+QKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEAS+YFTPF+FSLS+LGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIG+EAAILQSLSHGFVSSALFLIIGVLYDRWH+R VKYY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLSVGSTSYEALSVIKFSSYNQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASIYFTPFIFSLSVLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A4Y5T8F5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8F5_9PHAE) HSP 1 Score: 357 bits (915), Expect = 9.000e-120 Identity = 179/202 (88.61%), Postives = 193/202 (95.54%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IY +AG+T+YE+L + FS YDQ+WLWLAFFASFAAKVPMLP HIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEAS+YFTPF+F LSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGTVIGVEAA+LQSLSHGFVSSALFLIIGVLYDRWHSRV+KYY GLVH+MP+FI +FLFFTMANLGLP
Sbjct: 182 IYHYAGTTSYEALLGIKFSEYDQRWLWLAFFASFAAKVPMLPFHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASIYFTPFIFCLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVVIGLFTGTVIGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVIKYYGGLVHTMPLFISIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A0U1WNP0_SARFS (NADH-ubiquinone oxidoreductase chain 4 n=23 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNP0_SARFS) HSP 1 Score: 352 bits (902), Expect = 9.450e-118 Identity = 177/202 (87.62%), Postives = 191/202 (94.55%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYL GST+YE L+ FSNY+Q+WLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFP+A +YFTPFVFSLS+LG+VYTSLTAIRQTDLKRLIAYTSVAHMNLVM+GLF+GTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWH+R V YY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLSVGSTSYEILSITKFSNYNQRWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPQACLYFTPFVFSLSVLGIVYTSLTAIRQTDLKRLIAYTSVAHMNLVMVGLFSGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVNYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A8F0K293_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K293_9PHAE) HSP 1 Score: 348 bits (893), Expect = 2.170e-116 Identity = 177/202 (87.62%), Postives = 189/202 (93.56%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IYLFAGST++E L + FS Y Q+WLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFP AS+YFTP VFSLS+ GVVYTSLTAIRQTDLKRLIAYTSVAHMNLV+IGLFTGTVIG+EAAI+QSLSHGFVSSALFL IGVLYDRWHSRVV YY GL H+MP+FII+FLFFTMANLGLP
Sbjct: 182 IYLFAGSTHFEVLNMIGFSPYTQRWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASIYFTPLVFSLSVFGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVVIGLFTGTVIGIEAAIVQSLSHGFVSSALFLSIGVLYDRWHSRVVTYYGGLTHTMPIFIIIFLFFTMANLGLP 383
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Match: A0A8F0K094_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K094_9PHAE) HSP 1 Score: 333 bits (853), Expect = 2.220e-110 Identity = 167/202 (82.67%), Postives = 183/202 (90.59%), Query Frame = 1
Query: 1 IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPEASVYFTPFVFSLSLLGVVYTSLTAIRQTDLKRLIAYTSVAHMNLVMIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLP 606
IY GSTNY L+ + FS YDQKWLWL FFASFA KVPMLP H+WLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFP ASVY+ P V+SLSL+GVVYTSLTAIRQTD KRLIAYTSVAHMNLV+IGLFTGT IGVEAA+ QSLSHGFVSSALFLIIG+LYDRWHSR++ YY GLV++MP+FII+FLFFT+ANLGLP
Sbjct: 182 IYRLVGSTNYIVLSFIDFSFYDQKWLWLLFFASFAVKVPMLPFHLWLPEAHVEAPTAGSVILAGILLKLGSYGFLRFSLGLFPLASVYYAPIVYSLSLIGVVYTSLTAIRQTDFKRLIAYTSVAHMNLVIIGLFTGTAIGVEAALFQSLSHGFVSSALFLIIGILYDRWHSRIISYYGGLVYTMPLFIILFLFFTLANLGLP 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig75539.15537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig75539.15537.1 >prot_H-paniculata_contig75539.15537.1 ID=prot_H-paniculata_contig75539.15537.1|Name=mRNA_H-paniculata_contig75539.15537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp IYLFAGSTNYESLATVSFSNYDQKWLWLAFFASFAAKVPMLPVHIWLPEAback to top mRNA from alignment at H-paniculata_contig75539:1..606- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig75539.15537.1 ID=mRNA_H-paniculata_contig75539.15537.1|Name=mRNA_H-paniculata_contig75539.15537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=606bp|location=Sequence derived from alignment at H-paniculata_contig75539:1..606- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig75539:1..606- >mRNA_H-paniculata_contig75539.15537.1 ID=mRNA_H-paniculata_contig75539.15537.1|Name=mRNA_H-paniculata_contig75539.15537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig75539:1..606- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |