prot_H-paniculata_contig7552.15536.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7552.15536.1
Unique Nameprot_H-paniculata_contig7552.15536.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
BLAST of mRNA_H-paniculata_contig7552.15536.1 vs. uniprot
Match: A0A6H5LAW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW1_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 2.060e-116
Identity = 218/421 (51.78%), Postives = 284/421 (67.46%), Query Frame = 0
Query:    1 MWRSIAAVAVCAPVVGGFEIPFSRPTCSQRGQ--LSSSRSSINCNTENT-TRFXXXXXXXXXXXXAIMMAGPNKGKQPSFFADWPLLEAEIKVYLAERGAGAP----GNQNEPGQRNWVLELLSVDPVKMALEDTPERDQYDGEADLLSASELFRFGYDYLVEPILRRGGYEVVSKRMGIPLNKRTLKDRQYYERRG--VALSPQKP-DREGFLKLGRARDERLDSIAEVGREEKKKSLFDKQAMMDKEARSKVAKQNSKPKMLNRSKTIPPPTVIMNKSKSDDTEEPFRAPGLPDELKGPRAWTPSTQGEGVSPPEPLLLNLPQRVYAVAVVACLALAYGRGTSDAVEKGFLSPDIATSAATASLFLVAMNVASAVFGASIAKSKRRSVPLWVFKGSLAGLPSVLELKGLPDIILPLESA 411
            MW  +    +C    GGF +    PT S +     SSSR    C+     T  XXXXXXXXXX   +MMAGPN+G++P FFA+WP+LEAEI+ YL ER AG P    G     G    +L  LSV+P +MALE+ P+RD++DGE ++LS SEL R+GY YL+EP+++ GGY   S+RMGI LN RTLKD +YYER    V L  QK  D++GFL LG A++ERL+S+A V RE+++KSLF+KQAMMDK+ ++K A    K ++LN S+ +P    +  +S+ +  EE FR PGL  E +    W P  + E   P +PLLLN  QR  AVAV  CL+LA+G+GT DA+E G L  D+A +A  ASLFL+ +NVASAV GASIAK+K RSVPLWVFKG+LAGL SVLELKGLP+++ PL S+
Sbjct:    6 MWLPVITAILCVAGAGGFYVRTIAPTASLKPSPTSSSSRCHARCSRRRLPTXXXXXXXXXXXXRTIVMMAGPNQGQKPGFFAEWPVLEAEIRAYLDERQAGDPEKGGGGVESKGAGGTLLNFLSVNPTQMALENEPDRDEWDGEVNVLSYSELTRYGYGYLIEPMMKIGGYVAASERMGIDLNARTLKDNEYYERTNPTVGLDIQKKADKDGFLTLGSAKEERLNSVANVSREDRRKSLFEKQAMMDKKTKAKKAA-TKKSRVLNTSRKVP--VNLGGRSQKEVDEEIFRKPGLTAEQRDISEWVPEVRAEDALPAQPLLLNFAQRANAVAVCGCLSLAFGKGTLDALETGLLPRDVAEAAVPASLFLLGLNVASAVAGASIAKNKGRSVPLWVFKGALAGLTSVLELKGLPELV-PLGSS 422          
BLAST of mRNA_H-paniculata_contig7552.15536.1 vs. uniprot
Match: A0A0G4H5C6_VITBC (Guanylate kinase-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H5C6_VITBC)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-5
Identity = 44/131 (33.59%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   63 AIMMAGPNKGKQPSFFADWPLLEAEIKVYLAERG----AGAPGNQNEPGQRNWVLELLSVDPVKMALEDTPERDQYDGEADLLSAS--------------ELFRFGYDYLVEPILR-RGGYEVVSKRMGIP 174
            AI   GPN+ +Q +FF  +  LE+E++ YL +R      GAP  + + G  N  L+     P   +  +   +   DG+   LSA               EL R+GY YLV+PI+R  GGY  VS+R+ +P
Sbjct:    9 AIDRGGPNRHQQSAFFGSFDALESEVQHYLGDRERQIITGAPAAEGDHG--NGGLQAFIRWPFGRS--ERHRQGDSDGQQSPLSAQDVRERLARAPLEYGELSRYGYGYLVDPIMRYHGGYIRVSQRLNLP 135          
BLAST of mRNA_H-paniculata_contig7552.15536.1 vs. uniprot
Match: B5YNF0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNF0_THAPS)

HSP 1 Score: 56.6 bits (135), Expect = 4.360e-5
Identity = 95/365 (26.03%), Postives = 150/365 (41.10%), Query Frame = 0
Query:   70 NKGKQPSFFADWPLLEAEIKVYLAE------RGAGAPGNQNEPGQ------RNWVLELLSVDPVKMAL-EDTPERDQYDGEADLLSASELFRFGYDYLVEPILRRGGYEVVSKRMGIP-------LNKRTLKDRQYYERRGVALSPQKPDREGFLKLGRARDERLDSIAEVGREEKKKSLFDKQAMMDKEARSKVAKQNSKPKMLNRSKTIPPPTVIMNKSKSDDTEEPFRAPGLPDELKGPRAWTPSTQ-GEGVSPP-EPLLLNLPQRVYAVAVVACLALAYGRGTSDAVEK-GFLSPDIATSAATASLFLVAMNVASAVFGASI-AKSKRRSVPLWVFKGSLAGLPSVLELKGLPDIILPLES 410
            +K      FA   + E ++KV LAE              ++E G+       N VL+ +S  P K  + E+ P+   YD         EL ++GY YLV PI++ GG   + + M +P       L K+    +   +R G         R   LK+  A D+  D++ +   E  +K          +  R K+ +++      + +   P  T +    K D   E  R  G        +AW    + GE    P E L +    RVY++ V   +ALA+G  T  A+   G  S D+       +L L+A    S +  A + A  KRRS  +W  KG   G  S+ +L+ L D++   ES
Sbjct:   64 SKSYDTRLFAAKDINEEQLKVELAEYLRKREEANADEAAKSEVGKVIGGTRGNIVLDFVSGSPNKQRVQEEAPDVFDYD---------ELTKYGYSYLVTPIMKNGGRRAMYQLMNLPEPATPERLTKKKSAPKLVIDRTGETDKA----RYTGLKMSAAMDD--DAMGKALEEAARK------VKQGESLRKKLVEEDYVLPYADNTNKGPRQTPLWTPEKLD---EAGRKAGEA------QAWARKARMGELKKDPFEILAVEGELRVYSIVVAFTVALAFGNATPTALRMLGVGSDDMLDVFRVPALALLAAGFGSCLMNALVLAPPKRRSSFVWGLKGLFGGPLSIRQLRELDDLMTIGES 398          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7552.15536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LAW1_9PHAE2.060e-11651.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4H5C6_VITBC1.240e-533.59Guanylate kinase-like domain-containing protein n=... [more]
B5YNF0_THAPS4.360e-526.03Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 354..373
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..353
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 374..419
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.523
NoneNo IPR availableTMHMMTMhelixcoord: 347..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7552contigH-paniculata_contig7552:5680..11017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7552.15536.1mRNA_H-paniculata_contig7552.15536.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7552 5584..11351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7552.15536.1 ID=prot_H-paniculata_contig7552.15536.1|Name=mRNA_H-paniculata_contig7552.15536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
MWRSIAAVAVCAPVVGGFEIPFSRPTCSQRGQLSSSRSSINCNTENTTRF
RYRRRYSTSTATAIMMAGPNKGKQPSFFADWPLLEAEIKVYLAERGAGAP
GNQNEPGQRNWVLELLSVDPVKMALEDTPERDQYDGEADLLSASELFRFG
YDYLVEPILRRGGYEVVSKRMGIPLNKRTLKDRQYYERRGVALSPQKPDR
EGFLKLGRARDERLDSIAEVGREEKKKSLFDKQAMMDKEARSKVAKQNSK
PKMLNRSKTIPPPTVIMNKSKSDDTEEPFRAPGLPDELKGPRAWTPSTQG
EGVSPPEPLLLNLPQRVYAVAVVACLALAYGRGTSDAVEKGFLSPDIATS
AATASLFLVAMNVASAVFGASIAKSKRRSVPLWVFKGSLAGLPSVLELKG
LPDIILPLESADEGEDNAA*
back to top