mRNA_H-paniculata_contig755.15532.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig755.15532.1 vs. uniprot
Match: A0A6H5JU62_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU62_9PHAE) HSP 1 Score: 535 bits (1379), Expect = 4.230e-152 Identity = 747/1998 (37.39%), Postives = 921/1998 (46.10%), Query Frame = 2
Query: 1133 YSALVERFAAERAAEKALASVSDGVREGKTS--DFQLRLSVLPGFGEGNPRRENQQVMDAAIMTQGERGKESDDGRRRHSNPVRGTESADGVL---LSHPRSSQPXXXXXXXXXXXXXXXTLSIVTLKEDRASTSAATSALKDRLRARWYRLEAARKADRQREGAERKLMAIEDCYVSKGVVDDQRGIRRHNNGDGEVDAQRGWGQRGIGQG---GSHRVREVDETSNYDSSGEEKXXXXXXXXXXXXEKSLVPAAAMFAYNKEQF----------TTSSSTNTDANMAASHVVLHTGQKAISAAGTAAIRRSQQATDDLAPSAYNTEATAKNPTVVGVGSDANLPSATSNGVNGQQGSSHERRDSDLHEYDPQDELECDAVSATVAQESVVTERVQAECQSRQAGSLSDL-VRPLGGGADYRDKLRRTSLHLVAEGGSLESVVLLLKHGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQAAMSGQSKILMAMVNSNQACRKSSRDSIDPNSATNLILDPSSLHPASSARGSTSDSARPRWSSAPAAGRQGDRVGKRRLLSAVHASGALIFGGTRVPTSDVGEGGRGQGGALLPELTPIHEAAGAGQAETLSLLLDLGVSFEERDFVRSGFGDRAAGDTPXXXXXXXXXXXXXXXXXXAGAATSRENARXXXXXXXXXXXXXXXXXXXXVRRGTRFDDGDVGIRQRTEQGRLLASTARRLVDR--TDPLELALREGHLSCAAVLVEGGTRITSRALQAVRLEPSAP--TSGRSGASGTSLRYAG---------GGLTANGN-GTESTPHVVSGAAKLSFQTDLLDSMSSDIAEADESTASNGSRVLID-----------SQRIQASFQARDVTYGAGESAKSIVGGVIERAAAAAAGGERPIKTDDKKVNRVGGLLPGLGECDAVLILADESRLPVHSCLLAAFSGAFRDLFLGFSDCHRPNERCRSAYPRRCGCCCDGSNPSPVCTPGAKPPITSPTSTRGDIGSIPSFNGQIYAAASGVLAGVVPPSEEGGGIGGGNFVGDDRNHNPVKSTVPFVRLTPRDPRTVEALDGGTRTLPEESAMAIAREDAEPVANTAQDLPAPSENDKEDRRARASAVYALLVEHYELGSAAAETTKRATTSNSRTASTLSRALCEEEVDVAAKNAATTIVAVLSEKHPDGATATCERSA-----VVGWGAGRGEVWIRFWGVSVVAALVRHCYCGRPPTSMRHPGELVKLLAAAASLRMARLMRQVEALLFATLAQQPNSKKLTDHRRAETMLRAARALGATDLESRCTLLLQANGTSPKVMKLRRQLRIPSLNLSDVGRGLDRLHGSGFLGSGPAHSWSSAVVPGHIVAQNAGVAAVTTAAKRTVDFAFRKRAVEFDQLVPLLLDPSR----CSSALSIGRRERVLLLKSAMNEACVGISKDSIIASSYGGDDAQSTCA--HECGLLSQHHRSCCRRSRLARSNGFIQNGKMAASPGTGAAAGETQYDQQASASSARPATASLCCAEGGLVAVPAASNFAAFSHGMGWLLRSGVAADVALVLD---LHSSAM--------GDD--------------------------VHQAPTPCKAGVKTPPRRFV---------------------------FLAHSLVLGAMSEKFAAMLRFVRRQDDQRPTSDDSDNDSCEINHKANNIATRANIAGNGDTDIYFGSEPGGSLLPTCARKRENTELEEDQVYRETTWPVRSG---PSARSCSWCECCRAARPEEFRRPAQVRDRVPRELELRSPLLSPRSLGLFLEFCYTCVLDPNISTVELSELVLLADEYLVPELALQAERLLVE-----------------------SLDAERLH-------MEPEETASTPLELLQLGVSLGLRALSMAAARTVLLQLERVCSSEAFASSGMTKRELIVAALEA 6670
YS+L +R A E AA A+ S G G DF RLSVLP G G +AI+ SD +P G+ DG + +S +S P + V SA T+AL+ RLR RW+RLEAARKA RQRE AER LM EDC + N GDG + + G G+ G + R + +S XXXXXXXXXXXX T TNT + + Q S G +AI A +L +A E + P VG++ ++G+ G C A V E V A CQ+ AG L+DL VR G AD +DKLRRT LHL AE GSLE V LLLK GTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++LM M NSNQA + S+ S D ++ ++++ S A+ +G+ GKRR L + G+ S GG+G G +P L+P+HEAA +GQ ETLSLLL LGVS EERD +G G GDTP AGA RENARXXXXXXXXXXXXXXXXXXXX D G R GR +++ R +PLELALREG L+CAA L+EGG I R L+AV+L+PS T +S A G + YAG GG + NG G+ TP A L Q D+L +S ++ E +S +G + +D S I+ +++ +D+ + GG E AA A RP + V VGGL P LGECD L+L D SRLP HSCLLAAFSG F DLFL R + RC R C P A+ GGN+ + R P +P S +A A D + D+R R+ V+ LL H G + T++ +T+ ++S E VAA A ATAT E +A V+ WG GRGEV +RFWG ++A+V+H Y G+PP++M H L +LL A+ SLRM RL+RQVE LL LA Q + H A +LRAAR L ATDLE RCTL +QANG P VMKLRR+L +PSLN DV RGL RL SG+LGSGPA++WSS+ G + +A A AAK VD + RKRAV+FDQLVPLLLD R C+S LSIGR+ER +LL +A+ +AC S S +DA A + + R CC R +G N RPA VP SN +AFSHGMGWLLR+G ADV LVL HS AM G++ H A + + + P V FLAHS+VL + SEKF+AMLRFV+ QD T DS + S + + T N + + E G A + ++ E + P R PS S C C R R R+ PRE+EL SP+L+P+SLGLFLEF YT VLD ++ST ELSEL L+ADEYLVP+L QAE LLVE S D+ + E+T S PLELLQLGVSL L LS AAAR VLLQLERV SEAF S M+KREL++AALEA
Sbjct: 392 YSSLKDRLAIEAAAAAKAAAESSGALGGTAEGDDFS-RLSVLPSVGSGRGGEAKPGSTSSAILPVS-----SDLRVLEGCSP--GSMGTDGDVSRGISALQSQSPKLPSPP---------SRQAVAANSVTRCASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSAAS----VLGWNGGDGNHSSAEEGMRSGSGENHDEGEAKGRRASSSHTAMTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPMGTNTSSPL---------NQNECSR-GISAIASIPAAEAELIEAA---ETASCRPETTQVGAE----------LSGEDGG----------------RASCGGGGGLPA---VTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECVSLLLKQGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLMTMANSNQAWKSSAPSSRDNSAPYSMVV-----------------------MSGQASRARGNATGKRRALQSPMNPGSS--------NSARANGGKGNG-VPVPALSPLHEAAASGQPETLSLLLQLGVSLEERD-AAAGVG----GDTPLGRAVRAGQIDCARILLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXAPLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGAHINERTLRAVKLQPSGTEVTEDKSVAQGRQVIYAGTSPGESRRGGGWSGNGGAGSAGTP-----ATTLPLQADILQRLSPEVPEISDSAPPDGGGLEVDPEYDCDMLDGVSVDIRETWRDKDLARR-----EPSAGGSKETAAEGEAA-TRP----GRPVEYVGGLRPTLGECDIDLVLEDGSRLPAHSCLLAAFSGTFCDLFL------RRHGRCSR---RTC--------------PAAR---------------------------------------------GGNY-------------------SKRQP------------VPGASEVAAAAADGREM----------------DQRTRSRDVHHLLAGHDPPGQGRSATSEH----QRQTSPSIS------EAAVAAAAFA--------------ATATVENTAWWAPPVIDWGPGRGEVSVRFWGAGTMSAVVKHVYTGQPPSNM-HADGLGRLLVASVSLRMNRLIRQVEHLLSDRLAPQKGKARSLQHAEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNTLDVTRGLARLSNSGYLGSGPAYAWSSS---GAVSTSSAS--ATVAAAKLAVDLSLRKRAVDFDQLVPLLLDTVRFITWCTSTLSIGRQERAVLLTAALADACPQESPRS-------QNDAPDPLAAPQRRRPIPPNLRGCC---DAVRCDGDRWNAD-------------------------RPA-------------VPLVSNVSAFSHGMGWLLRTGTVADVVLVLPEQPSHSDAMPPATVIEDGEEDEKNYSGNRENLSPGGRVGVQSSERGAHSADSAVDSPARVSPGGPVKDEGSGRPATDSRKMEGTTKDQLVNSRFLAHSMVLASRSEKFSAMLRFVQGQDGNSRTYADSVDGSSTDDDIFTDADTPEREHRNREEPPWGDVEQG-----EAAGHNQGEAVDNIGKDGEVSQPPRIDSRRPSPPSDRRCHCRRRPR----------RNTAPREMELHSPILTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDLIRQAEALLVECLVRRGDVRYSLQVTASRNAGDYSFDSTTFNGTTTVQSKREEDTESAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFEQSSMSKRELVMAALEA 2066 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig755.15532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig755.15532.1 >prot_H-paniculata_contig755.15532.1 ID=prot_H-paniculata_contig755.15532.1|Name=mRNA_H-paniculata_contig755.15532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2202bp MTDSSTRSNTTATSSATCKSLGSQTNVPLNPHANEFVPAKIASSTTANSAback to top mRNA from alignment at H-paniculata_contig755:16378..31454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig755.15532.1 ID=mRNA_H-paniculata_contig755.15532.1|Name=mRNA_H-paniculata_contig755.15532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15077bp|location=Sequence derived from alignment at H-paniculata_contig755:16378..31454- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig755:16378..31454- >mRNA_H-paniculata_contig755.15532.1 ID=mRNA_H-paniculata_contig755.15532.1|Name=mRNA_H-paniculata_contig755.15532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=13212bp|location=Sequence derived from alignment at H-paniculata_contig755:16378..31454- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |