prot_H-paniculata_contig7533.15518.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7533.15518.1
Unique Nameprot_H-paniculata_contig7533.15518.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
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BLAST of mRNA_H-paniculata_contig7533.15518.1 vs. uniprot
Match: D7G7B7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B7_ECTSI)

HSP 1 Score: 47.0 bits (110), Expect = 8.570e-6
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:    8 VGSAVAVGLLAALLFR-WLRNSWKGDEDNDIEVDGNMRTRIRHGGL 52
            +   +A GLL+   +R WL+ +    +D+D+E+DG MRTRIRHGGL
Sbjct:    6 IAGVLAAGLLSVGAYRLWLKAT---ADDDDVEIDGTMRTRIRHGGL 48
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7533.15518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7B7_ECTSI8.570e-647.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7533contigH-paniculata_contig7533:4032..7527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7533.15518.1mRNA_H-paniculata_contig7533.15518.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7533 3650..8968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7533.15518.1 ID=prot_H-paniculata_contig7533.15518.1|Name=mRNA_H-paniculata_contig7533.15518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MVDFGSLVGSAVAVGLLAALLFRWLRNSWKGDEDNDIEVDGNMRTRIRHG
GL*
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