mRNA_H-paniculata_contig7528.15511.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI) HSP 1 Score: 323 bits (828), Expect = 5.210e-99 Identity = 161/334 (48.20%), Postives = 220/334 (65.87%), Query Frame = 2
Query: 92 KHTALVGLALLAGSVDAA---SSTCEFRFEGYLNISESPTWTLPAAEPYAENSVVLNEGAPFVYKVSETESYAVNCTVTSWQYMS-NGTWETALYYP------DEVPTNPTEFQGLFSANGS-DLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPDISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDLPALC 1060
+H+ GL L AA +S+C +RF + N+S+ P W LPA+ P+ + P VY + AV+CT SW+Y + NG W+T L +P D P F+G F+A G ++ V+ +P S+APA+SDSLYGR +++ L C+ E V ++DSCV+F+V+FTNYSP D++ ALFRF DPAVP E+P AQP+SPGDI+LN NP+ +LDG++ CNGD+AEYLGEDGEWYFW+TGSDG YNLTHVFY + L+IATIQ WS N+EAAL+NR VRL+IHC+N ++ E+GY+ F IG + +E+C+D LC
Sbjct: 8 RHSLAAGLTALCLGRQAAVARASSCAYRFASFPNVSDLPVWNLPASLPWGPEASTFGGANPIVYLADDGTEEAVDCTGDSWRYQAANGEWKTELSFPATWESSDAAPM--VSFEGFFNATGDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQED--QIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIGGQ---EFDESCDDHSGLC 334
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: D7FPM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM7_ECTSI) HSP 1 Score: 276 bits (706), Expect = 3.530e-81 Identity = 160/377 (42.44%), Postives = 226/377 (59.95%), Query Frame = 2
Query: 83 MYAKHTALVGLALLAGSVDAASSTCEFRFEGYLNISESPTWTLPAAEPYAENSVVLNEGAPFVYKVSET--ESYAVNCTVTSWQYM--SNGTWETALYYPDEVPT-NPTEFQ--GLFSANGSDLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPD---ISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDLPALCAGTATVSAAGRRSSGLVGGRSWITYVTYTAMLIVGAVSAWV 1183
M+ A L+A + C FR +G+L+I++ T P +P ++N P VY V+E + Y VNC+V SW+Y+ +N T+ T + +PD T N TE GLF+A +L + A A A+SDSL+GRT++V L CD TV +DSC+ F++ FTN SP+ D + +AL+RF +PAVP LP A SPGD+ LN NPI D+DG+ TD CNG+++EYLGEDGEWY+++TGSDGN YN+THVFYA HLN+A IQ WS N+E AL+NRTVR+ I+C N + E+GYV F +GD N + D A+ + + + A G G R W++ + ++VGA++AWV
Sbjct: 2 MFTGRRAAQVAVLVATQAWRGDTECAFRLDGHLDITQPLTLIAPYVDP-GSGYRLINPYNPIVYLVNENVYDRYQVNCSVDSWRYLLDNNVTYATNVTFPDANATENATEVSVPGLFAAESHELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQ---TVTAEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNAYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNVNEREDGYVIFKVGDGNGY-FDINVADYEAILTDSGSTAFATPWGGGAAG-RGWLS--SAFTFVVVGALTAWV 370
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.120e-36 Identity = 102/279 (36.56%), Postives = 141/279 (50.54%), Query Frame = 2
Query: 290 ESYAVNCTVTSWQYMS--NGTWETALYYPDEVPTNPTEFQGLFSANGSDLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPDISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDL-----------PALCAGTATVSAA 1087
ES CT +S Q+ NG W + D + F ++L V + + +AP+L + L V++ L C +++ DSCVIFE FTN+SP D + A +RF DPA+P+F++P A P SPGD+ L N + G T+T CNGD AEY GEDG WY + SDG + L HVFY L ATIQ W N+ L NR VRL ++CTND E Y+ + + D+E+ C ++ P G A +SAA
Sbjct: 419 ESEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVV-----DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAPVFNLGAAALSAA 691
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.470e-36 Identity = 100/263 (38.02%), Postives = 138/263 (52.47%), Query Frame = 2
Query: 308 CTVTSWQYMS--NGTWETALYYPDEVPTNPTEFQGLFSANGSDLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPDISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDLPALCAGTATVSAAG 1090
CT +S Q+ NG W + D + F ++L V + + +AP+L + L V++ L C +++ DSCVIFE FTN+SP D + A +RF DPA+P+F++P A P SPGD+ L N + G T+T CNGD AEY GEDG WY + SDG+ + L HVFY L ATIQ W N+ L NR VRL ++CTND E Y++ + + TC+D+ LC TA AG
Sbjct: 424 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVV-----DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGDTHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLRVYCTNDERAE--YLYIRVSGESA-----TCDDIEDLC--TAVFPRAG 671
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 155 bits (393), Expect = 6.610e-36 Identity = 99/273 (36.26%), Postives = 139/273 (50.92%), Query Frame = 2
Query: 308 CTVTSWQYMS--NGTWETALYYPDEVPTNPTEFQGLFSANGSDLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPDISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDL-----------PALCAGTATVSAA 1087
CT +S Q+ NG W + D + F ++L V + + +AP+L + L V++ L C +++ DSCVIFE FTN+SP D + A +RF DPA+P+F++P A P SPGD+ L N + G T+T CNGD AEY GEDG WY + S+G + L HVFY L ATIQ W N+ L NR VRL ++CTND E Y+ + + D+E+ C ++ P G A +SAA
Sbjct: 364 CTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVV-----DSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNEFVKSNGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLCTEVDGDGDGALQLAPVFNLGAAALSAA 630
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: A0A6H5L4X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X3_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.210e-33 Identity = 86/262 (32.82%), Postives = 137/262 (52.29%), Query Frame = 2
Query: 299 AVNCTVTSWQYMS-NGTWETALYYP------DEVPTNPTEFQGLFSANGS-DLLVAPVPASLAPALSDSLYGRTVQVDLVCDTEHIPATVQDDDSCVIFEVEFTNYSPQPDISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTDTDTACNGDIAEYLGEDGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDLEETCEDLPALC 1060
A++CT SW++ + +G W+T L +P D P F+G F A G +++++ +P S+APA++DSLYGR +++ L T+ IP++ + +C ++ ++ + ++ + +G AEYL EDG WY W+TGSDG YNLTHVF+ + L+IATIQ S N+EAA +NR VRL+I C+N ++ E+GY+ F +G D +E+C+D LC
Sbjct: 17 AIDCTGDSWRHQAADGEWKTELSFPATWESSDAAPI--VSFEGFFYAIGDVEVMISGIPTSIAPAVADSLYGRNIEL-LWLATKRIPSSWRSILAC------YSKWALRTTAQRSMLTW---------------------------------------RSSGSKAEYLREDGAWYSWFTGSDGQRYNLTHVFFTTDFDQLHIATIQSARSLNLEAASHNRYVRLLILCSNQVNHEDGYLIFQVGGQ---DFDESCDDHLGLC 227
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: A0A814YKZ3_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814YKZ3_9BILA) HSP 1 Score: 67.0 bits (162), Expect = 1.940e-8 Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 2
Query: 611 STALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGT--DTDTACNGDIAE----YLGE-DGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNI 1003
+ L+ F P P+F LP AQP SPGD +LN++N I +G+ + CNG + YL E +G+W Y +G +L +VFYA S LN+AT+Q ++ N+ L +T+RL I C N ++G ++F +
Sbjct: 33 ANCLYSFTAPQFPSFTLPAAQPNSPGDQQLNLNNNIRLSNGSALNAGQGCNGGRSSGEYAYLNESNGQWMTSYPDVNGRPADL-NVFYATAQSALNVATLQTNYA-NLALFLTCKTIRLNITCNNG---QKGCIYFTV 165
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: A0A814J1F0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814J1F0_9BILA) HSP 1 Score: 61.2 bits (147), Expect = 6.660e-7 Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 2
Query: 620 LFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGT--DTDTACNGDIAE----YLGE-DGEWYFWYTGSDGNMYNLTHVFYAANTSHLNIATIQ 892
L+ F P+F LPPAQP SPGD RLN+ N I +G+ + CNG + YL E +G+W YT +DG NL +VFYA S LN+ T+Q
Sbjct: 33 LYSFTATQFPSFTLPPAQPHSPGDQRLNLYNDIRLSNGSALNAGQGCNGGRSSGEYGYLNESNGQWMTSYTDADGRSANL-NVFYATAQSALNVVTLQ 129
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Match: A0A813YXM5_9BILA (Hypothetical protein n=3 Tax=Adineta steineri TaxID=433720 RepID=A0A813YXM5_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 5.790e-6 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 2
Query: 608 ISTALFRFYDPAVPAFELPPAQPISPGDIRLNVDNPITDLDGTD--TDTACNGDIAEYLGEDGEWYFWYTGSDGNMYN--LTHVFYAANTSHLNIATIQKVWSYNMEAALYNRTVRLMIHCTNDIDFEEGYVFFNIGDSNTPDL 1027
I+ ++ F +P P+F LPP QP SPGD++LN++NPI DG+ CN Y E + F T D N N +T + YA L TIQ +Y + + L + +++ + C N + G +F +G ++ L
Sbjct: 14 ITKCIYAFTNPFYPSFTLPPPQPNSPGDVQLNINNPIRLADGSSLAAGQGCNSRGFSYY-EPSQEGFLTTYIDSNEQNTSITDIIYATKHDQLFARTIQSNHAY-LASYLAGKLLKIELDCNNGL---LGCAYFTVGGESSSSL 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7528.15511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7528.15511.1 >prot_H-paniculata_contig7528.15511.1 ID=prot_H-paniculata_contig7528.15511.1|Name=mRNA_H-paniculata_contig7528.15511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp MYAKHTALVGLALLAGSVDAASSTCEFRFEGYLNISESPTWTLPAAEPYAback to top mRNA from alignment at H-paniculata_contig7528:1746..9631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7528.15511.1 ID=mRNA_H-paniculata_contig7528.15511.1|Name=mRNA_H-paniculata_contig7528.15511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7886bp|location=Sequence derived from alignment at H-paniculata_contig7528:1746..9631- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7528:1746..9631- >mRNA_H-paniculata_contig7528.15511.1 ID=mRNA_H-paniculata_contig7528.15511.1|Name=mRNA_H-paniculata_contig7528.15511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig7528:1746..9631- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |