prot_H-paniculata_contig7523.15507.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7523.15507.1
Unique Nameprot_H-paniculata_contig7523.15507.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length294
Homology
BLAST of mRNA_H-paniculata_contig7523.15507.1 vs. uniprot
Match: D7G4L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L8_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 3.570e-39
Identity = 118/310 (38.06%), Postives = 151/310 (48.71%), Query Frame = 0
Query:    1 MFKSANDSKSRFIHKHMKAAAAAALTNSPLPTELGE-----------YGGTPA--TTSLSEPLAVMTTETGLEDYR--RWKEEIDWRWYLDHTANNNKRSTTGIDNHHN--HRISQKSRRRPRGRLCDGQIIPPVDGHXXXXXXXXXTSPVTHRGHAFTMGKGAEKPLSTHDTKPQTKTVVKLASMGEGGHSIVGGSTLVCVDGVISKSPFPRGDAGSYRGHCGGGVEVGFDNSRDLHSDGAMSSSKVEAVVRRLCDPKSFTGTAATGHLPITVDLEEGADVLLKDASIAVKDHVGTQEVSWRLRLAERL 293
            +FKSAND+KSRFIHKH++AA A + T+S    E+GE           +GG P      ++ P+AVM TE  LEDYR  R  E I     L   + +      G+ +  +   + S +  R  RGR  D  ++     H            + H  H    G             P T  V+    + +GG     G  L+  DGV  KS FPRG                   +  L S  +   S+ + V+ RLC+PK FTGTAATGHLP+ VDLE G  VLLK ASIAVKDH+G QEVSWRLRLAERL
Sbjct:   15 LFKSANDAKSRFIHKHIRAATALSHTSSS--PEVGEGMGMPEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTSVVPKASARGARLQRGRSEDSFVVGKKTNHCEHPSPRHPHQHLRHHPHPCQRGGHNSDQRQPKHRPPSTHAVI----LPKGG-----GLVLIGEDGV-RKSKFPRGC------ELSAAAMASVATTPPLESK-SSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 305          
BLAST of mRNA_H-paniculata_contig7523.15507.1 vs. uniprot
Match: A0A6H5KLC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC7_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 5.070e-32
Identity = 113/314 (35.99%), Postives = 140/314 (44.59%), Query Frame = 0
Query:    1 MFKSANDSKSRFIHKHMKAAAAAALTNSPLPTELGE-----------YGGTPA--TTSLSEPLAVMTTETGLEDYR-RWKEEIDWRWYLDHTANNNKRSTTGIDNHHNHRI-------SQKSRRRPRGRLCDGQIIPPVDGHXXXXXXXXXTSPVTHRGHAFTMGKGAEKPLSTHDTKPQTKTVVKLASMGEGGHSIVGGSTLVCVDGVISKSPFPRGDAGSYRGHCGGGVEVGFDNSRDLHSDGAMSSSKVEAVVRRLCDPKSFTGTAATGHLPITVDLEEGADVLLKDASIAVKDHVGTQEVSWRLRLAERL 293
            +FKSAND+KSRFI+KH++AA  A  ++SP   E+GE             G P      ++ P+AVM TE  LEDYR R + EI      DH    +K    G        +       S +     RGR  DG ++                  + H       G+            P T  V+    + +GG     G  L+  DGV  KS FPRG   S                                V+ RLC+PK FTGTAATG LP+ VDLE G  VLLK ASIAVKDH+G QEVSWRLRLAERL
Sbjct:   43 LFKSANDAKSRFINKHIRAATLAHTSSSP---EVGEGMGRQEPLPRHCSGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAEI----IRDHRGPGSKSEPQGPGPEGLKSLASAVPKASARGASLRRGRSDDGFVVSKKTNQREHPSPRHPHQYLRHXXXXXXXGEHNSDQPQPKQRSPSTHAVI----LPKGG-----GLVLIGEDGV-RKSKFPRGCEPSS-------ATXXXXXXXXXXXXXXXXXXXXXDVLARLCNPKHFTGTAATGRLPVVVDLERGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7523.15507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L8_ECTSI3.570e-3938.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLC7_9PHAE5.070e-3235.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7523contigH-paniculata_contig7523:2482..4911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7523.15507.1mRNA_H-paniculata_contig7523.15507.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7523 2464..4918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7523.15507.1 ID=prot_H-paniculata_contig7523.15507.1|Name=mRNA_H-paniculata_contig7523.15507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
MFKSANDSKSRFIHKHMKAAAAAALTNSPLPTELGEYGGTPATTSLSEPL
AVMTTETGLEDYRRWKEEIDWRWYLDHTANNNKRSTTGIDNHHNHRISQK
SRRRPRGRLCDGQIIPPVDGHVSFPEDGHTTSPVTHRGHAFTMGKGAEKP
LSTHDTKPQTKTVVKLASMGEGGHSIVGGSTLVCVDGVISKSPFPRGDAG
SYRGHCGGGVEVGFDNSRDLHSDGAMSSSKVEAVVRRLCDPKSFTGTAAT
GHLPITVDLEEGADVLLKDASIAVKDHVGTQEVSWRLRLAERL*
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