prot_H-paniculata_contig7491.15472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7491.15472.1
Unique Nameprot_H-paniculata_contig7491.15472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length380
Homology
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BLAST of mRNA_H-paniculata_contig7491.15472.1 vs. uniprot
Match: A0A6H5KWN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN4_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.880e-55
Identity = 147/336 (43.75%), Postives = 182/336 (54.17%), Query Frame = 0 
Query:    1 MYANTADGLDTDPFVAKLNGRSGAVMWGWQGVSP-GNGYANAVAVDTAGGVYACGSAAPGLFDGGGRGEEGECGEGGNGEAGRSCAEVDMFVAKLDGKSGDPVWYEQFGSNTDDHAVGLVLGPADAKHLSTAEAGRVVDQAEAGTGGGPGAEVNNPLYLTGWTRAALYSQVPAHWQDAWAVKLSNPPPETLGISGGVLIPGTGSMSSGR-----SGVTAAKQAASDAARGAVTIGFIGSVIGVTVILSAALCLLLRRASH-GGALSTWRYD------PFKSIWGRR-RHRLSESDGXXXXXXXXXXXXXHGSAQDRDNVELKLLSPDGGDGSCISP 322
            ++++T+ G DTD FVAKL+G +G  +WGWQG S  GN YANAVAVD+ G VYACG+A     D                            +  LDG+SG  VW EQFGS  DD AVGLVLGP          AG  V   E   GGG      +PLYLTGWTR AL+S+ PA WQD WAVKL NPPP TLG++       TG+          SG   A+QAA++  RGAVT G +G+V G+ V++S  L  +LR+A+  GGALS  RYD      P K ++ RR R  L +S G              G  + +D VEL LLS +GGDG   SP
Sbjct:  293 LFSSTSAGRDTDAFVAKLDGANGTHVWGWQGGSEVGNDYANAVAVDSNGDVYACGAAPRDPIDA-------------------------PSLRNLDGESGALVWGEQFGSGADDQAVGLVLGPVSFA------AGDAVGSLEQEKGGG------SPLYLTGWTRGALFSKEPARWQDGWAVKLPNPPPSTLGVAD------TGAWEKPLPVPIGSGAAEAQQAAAE--RGAVTAGLVGTVTGMLVVVSICLYFVLRKANMTGGALSAPRYDSVKDLDPTKGMFRRRGRPMLHDSGGKGQG----------GGGKAQDGVELTLLS-EGGDGGRSSP 572
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BLAST of mRNA_H-paniculata_contig7491.15472.1 vs. uniprot
Match: D8LTJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ3_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 2.860e-43
Identity = 113/237 (47.68%), Postives = 139/237 (58.65%), Query Frame = 0 
Query:   88 DMFVAKLDGKSGDPVWYEQFGSNTDDHAVGLVLGPADAKHLSTAEAGRVVDQAEAGTGGGPGAEVNNPLYLTGWTRAALYSQVPAHWQDAWAVKLSNPPPETLGISGGVLIPGTGSMSSGRSGVTAAKQAASDAARGAVTIGFIGSVIGVTVILSAALCLLLRRASH-GGALSTWRY-DPFKSIWGRRRHRLSESDGXXXXXXXXXXXXXHGSAQDRDNVELKLLSPDGGDGSCISP 322
            DMFVAKLDG+SG  VW EQFGS  DD AVGLVLGP  +       A   V   E   GGG      +PLYLTGWTR AL+S+ PA WQD WAVKL NPPP TLG++          +  G SG   A+QAA++  RGAVT G +G+V G+ V++S  L  +LR+A+  GGALS  +  DP K ++ RRR R    DG              G+ + +D VEL LLS +GGDG   SP
Sbjct:   51 DMFVAKLDGESGGLVWGEQFGSGADDQAVGLVLGPVSSA------AADAVGSLEQEQGGG------SPLYLTGWTRGALFSKQPARWQDGWAVKLPNPPPSTLGVADAGAWEEPLPVPIG-SGAAEAQQAAAE--RGAVTAGLVGTVTGMLVVVSICLYFVLRKANMAGGALSALKDPDPTKGMF-RRRGRPMLHDGGGKGVG--------GAGKAQDGVELTLLS-EGGDGGRSSP 262
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7491.15472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWN4_9PHAE2.880e-5543.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTJ3_ECTSI2.860e-4347.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..379
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..249
NoneNo IPR availableTMHMMTMhelixcoord: 227..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7491contigH-paniculata_contig7491:1802..8516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7491.15472.1mRNA_H-paniculata_contig7491.15472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7491 1603..10920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7491.15472.1 ID=prot_H-paniculata_contig7491.15472.1|Name=mRNA_H-paniculata_contig7491.15472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=380bp
MYANTADGLDTDPFVAKLNGRSGAVMWGWQGVSPGNGYANAVAVDTAGGV
YACGSAAPGLFDGGGRGEEGECGEGGNGEAGRSCAEVDMFVAKLDGKSGD
PVWYEQFGSNTDDHAVGLVLGPADAKHLSTAEAGRVVDQAEAGTGGGPGA
EVNNPLYLTGWTRAALYSQVPAHWQDAWAVKLSNPPPETLGISGGVLIPG
TGSMSSGRSGVTAAKQAASDAARGAVTIGFIGSVIGVTVILSAALCLLLR
RASHGGALSTWRYDPFKSIWGRRRHRLSESDGGASGGGSGGGGRHHGSAQ
DRDNVELKLLSPDGGDGSCISPHHPAIRHGGGISCVGGGSVGADGGGGAL
GSGGLSGSSGRRETSKSPPAGLRPPTFYL*
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