prot_H-paniculata_contig7488.15469.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7488.15469.1
Unique Nameprot_H-paniculata_contig7488.15469.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 7.840e-14
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 MGSVGSTETA--AGTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDVSVGPMPLFFLCCTHLTGDSAHQIYG 75
            MG   S ET   +GT F+P+KLLSVKDTILVDM+NG E+SK +SYCVTDPD+   P+          TG +  ++ G
Sbjct:    1 MGGAQSAETTPTSGTPFKPSKLLSVKDTILVDMMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEG 77          
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.030e-13
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MGSVGSTETAA-GTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDVSVGPM 55
            MG+  S  T   GT F P KLLSVKDTILVDML+G +HSKNISYCVTDPD+   P+
Sbjct:    1 MGAEQSASTEPLGTPFVPRKLLSVKDTILVDMLSGPDHSKNISYCVTDPDLHDNPI 56          
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 4.540e-12
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MGSVGSTETAAGTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDVSVGPMPLFFLCCTHLTGDSAHQIYG 75
            MG   S E +AGT F P K+LSVKDTILVDM+NG ++S+ +SYCVTDPD+   P+          TG +  ++ G
Sbjct:    1 MGGAQSAE-SAGTPFVPNKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEG 74          
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.390e-12
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    1 MGSVGSTETAAGTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDVSVGPMPLFFLCCTHLTGDSAHQIYG 75
            MG   S E  +GT F+P KLLSVKDTILVDM+NG  +S+ +SYCVTDPD+   P+          TG +  ++ G
Sbjct:    1 MGGAQSAE-PSGTPFKPAKLLSVKDTILVDMMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEG 74          
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 60.8 bits (146), Expect = 1.590e-9
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   12 GTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDVSVGPMPLFFLCCTHLTGDSAHQIYG 75
            GT F P K LSVKD I+VDMLNG +HSK + YCV+DPD+   P+       + L G +  ++ G
Sbjct:   13 GTPFVPKKQLSVKDVIIVDMLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEG 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7488.15469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A126WVC6_9PHAE7.840e-1450.65Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A126WXS3_9PHAE6.030e-1366.07Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A6H5L122_9PHAE4.540e-1248.00PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126X2E3_9PHAE6.390e-1248.00Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WZ19_SARFS1.590e-946.88Putative LOV domain-containing protein n=6 Tax=Sar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7488contigH-paniculata_contig7488:5079..9193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7488.15469.1mRNA_H-paniculata_contig7488.15469.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7488 2508..9398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7488.15469.1 ID=prot_H-paniculata_contig7488.15469.1|Name=mRNA_H-paniculata_contig7488.15469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MGSVGSTETAAGTLFRPTKLLSVKDTILVDMLNGAEHSKNISYCVTDPDV
SVGPMPLFFLCCTHLTGDSAHQIYGDINGNLSTSLARL*
back to top