prot_H-paniculata_contig7487.15468.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7487.15468.1
Unique Nameprot_H-paniculata_contig7487.15468.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length178
Homology
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 4.950e-49
Identity = 105/176 (59.66%), Postives = 123/176 (69.89%), Query Frame = 0
Query:    1 MSHDHGDHGSSMASDAG-MISMGDMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKNGT--NMDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTRARQAAAAANGMKMAPLPASASSGSPCCNN 173
            MSHDHG H S  +S A  M  MGD FC G GTVML GFQAA+S S RC+LFLFEGA VD+ TKYAFA +GAF +GFA E+IRY R  +A+ +G     D+  T AF VQ+FLAY LMLLVMLYEYV L  II GLA G+  TLRL+  R+ AA  +G K A   A  SSG+PCCN+
Sbjct:   28 MSHDHGSHSSDASSMASSMTDMGDQFCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAKASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAG-SSGTPCCNS 202          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.030e-42
Identity = 95/180 (52.78%), Postives = 115/180 (63.89%), Query Frame = 0
Query:    1 MSHDHGDHGSSMASDAGMISM-GDMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKNGTNM--DLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTRARQAAAAANGMKMAPLPASASSGSPCCNNDVCA 177
            MSHDHG                GD FC+G GTVML GFQ+A+S S  C+LFLFEGA VD+ TKYAFA +GAF +GFA E+IRY R  +A+ +  ++  DL +T AF VQI+LAY LMLLVMLYEYV L  II GLA G+  TLR +  R+ AA  +     P     SSG+PCCN D  A
Sbjct:    1 MSHDHGSXXXXXXXXXXXXXXXGDQFCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTVA 180          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A9UVZ5_MONBE (Copper transport protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVZ5_MONBE)

HSP 1 Score: 88.2 bits (217), Expect = 8.250e-19
Identity = 71/172 (41.28%), Postives = 94/172 (54.65%), Query Frame = 0
Query:   12 MASDAGMISMGDMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKNGTN---MDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTRARQAAAA---ANGMK---MAPLPASASSGSPCCNND 174
            M  D GM S G  FCSGSG VM +GF  A S    C +FLF   V+D+A KYA A++G F +G   E+ R+YR  L  +  T     DL +  ++ + +  AY LMLLVMLYE +F   IILGLA G F   +L R  +   A    +G K   + P+  + S  SPCC  +
Sbjct:    3 MDDDMGMPSNG--FCSGSGMVMNDGFGRAPSF---CPIFLFHNVVIDTAGKYAIALIGTFCMGLFNELFRWYRNRLEAQESTRPILQDLCVALSYGIHMLNAYFLMLLVMLYESLFFVMIILGLATGSFVVRQLQRHVRKVGAYQDLDGRKPSALTPIVQTPSGTSPCCGGN 169          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A0A835YQY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.340e-17
Identity = 77/202 (38.12%), Postives = 103/202 (50.99%), Query Frame = 0
Query:    1 MSHDHGDHGSSMASDAGMI-SMGDMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKNGTNM-----DLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFT----TLRLTRARQAAAAA-----------------NGMKMAPLPASA--SSGSPCCNN 173
            MSH HG  GSS     G   +    FC+GSGTVM NGFQ + +  + CV++LF GA++D+  KYA AV+G F + F  E +R+ R  +A +           LAL+ A +V    AY LMLL MLYE V  + I+LGL  GYF       R  R +++AA                   +GM    LP +   SS +PCC N
Sbjct:    4 MSHMHGGGGSSGVDQMGXXXAAASTFCTGSGTVMQNGFQTSFTNGS-CVIWLFPGAILDTEGKYAAAVIGTFLLAFGNEGLRWLRTRMAAEQAPPXXXXXPSLALSVAQMVN---AYWLMLLTMLYESVMFSMIVLGLMAGYFAFNYGDARAARKQRSAATKGLGADDSSAEVSPEGSDDGMNAKALPTATFVSSSTPCCTN 201          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: W7U9L9_9STRA (Copper transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9L9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.300e-14
Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   21 MGDM--FCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYR-------AVLAQKNGTNMDLALTGA---------------FVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFT 138
            MGD   FC G G+VM NGF     +   C+L+LF+GAVV++A KYA A++G F + F+ E +R++R       A +   +G      +TG                F V +F+AY +MLLVMLYE+     ++LGLA GYFT
Sbjct:   64 MGDSGGFCQGEGSVMNNGF-VFMPQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFT 204          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A0A812TBD0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TBD0_9DINO)

HSP 1 Score: 76.3 bits (186), Expect = 3.360e-14
Identity = 61/180 (33.89%), Postives = 90/180 (50.00%), Query Frame = 0
Query:    1 MSHDHGDHGSSMASDAGMISMGDMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKN-------GTNMDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTRARQAAAAANGMKMAPLPASASSGSPCCNN 173
            M HDH      M S  G     D FC+GSG VM++GFQ        CVLFLF+G V++ A KY    +G+F +  A   ++  R ++ + +       G   D      F +Q+FLAY++MLL M YE V  + I++G A  +F   R+ R + A           L  S+  G+PCC++
Sbjct:    1 MDHDHAHDMPEMGSGDG-----DAFCAGSGRVMMSGFQLGFGPDQPCVLFLFQGWVMNDAGKYFAGCLGSFLMPVAIVALQSIREMVVESSASKGRVMGMLYDALAAVLFGLQMFLAYSVMLLTMTYEAVMFSCILVGFAFAWFVLRRMKRHKHAV---------DLSKSSVVGAPCCSS 166          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.660e-12
Identity = 51/126 (40.48%), Postives = 70/126 (55.56%), Query Frame = 0
Query:   25 FCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAV------------LAQKNGTNMDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFT 138
            FC G+G VM  GF+  S  +  C+++LFEGAV+D+A KY  AV+G F + FA E IR+ R+             L+       D+ L   +  Q+ +AY LML+VM YE    T I+LGL  GY T
Sbjct:   23 FCEGTGMVMQKGFRV-SFTNGMCIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGFQMLIAYWLMLIVMTYEVFLFTAILLGLTAGYLT 147          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: W7TTP6_9STRA (Copper transport protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-10
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   42 SESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYR-------AVLAQKNGTNMDLALTGA---------------FVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFT 138
            S+   C+L+LF+GAVV++A KYA A++G F + F+ E +R++R       A +   +G      +TG                F V +F+AY +MLLVMLYE+     ++LGLA GYFT
Sbjct:   28 SQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFT 146          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB)

HSP 1 Score: 67.0 bits (162), Expect = 1.680e-10
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   24 MFCSGSGTVMLNGFQAASS-----ESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFAT---EIIRYYRAVLAQKNGTN----------------------MDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTR 144
            MFC G G VM+ GFQ   +     E   C+L+LF+GAVVD+  KYA A +G+F++  A    +++R   ++ A +  ++                      +DLA+   F +Q+ LAY +MLLVMLYE    T II+G  +     +RL R
Sbjct:    1 MFCKGMGRVMMPGFQTTYNPSKMIEGNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRLRR 151          
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Match: A0A813BBW3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813BBW3_SYMMI)

HSP 1 Score: 69.3 bits (168), Expect = 1.740e-10
Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 0
Query:   23 DMFCSGSGTVMLNGFQAASSESARCVLFLFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKN-------GTNMDLALTGAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTR 144
            D FC+GSG VM++GFQ     +  CVLFLF G V+D+  +Y     GAF I  A  +++  R V+ +K        G   D      F +Q+ LAY +MLL MLYE V    II G    +F   R+ R
Sbjct:  520 DAFCTGSGWVMMSGFQLGVGSTQPCVLFLFPGWVLDNEARYFAGCFGAFIIPVAIVVLQTARDVVVEKAAAKEKGAGLLYDAIAAFLFGLQMCLAYFVMLLTMLYEAVLFLCIIAGFVTSFFILRRIKR 648          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7487.15468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FH71_ECTSI4.950e-4959.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU3_ECTSI1.030e-4252.78Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A9UVZ5_MONBE8.250e-1941.28Copper transport protein n=1 Tax=Monosiga brevicol... [more]
A0A835YQY3_9STRA1.340e-1738.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U9L9_9STRA2.300e-1439.44Copper transport protein n=3 Tax=Monodopsidaceae T... [more]
A0A812TBD0_9DINO3.360e-1433.89Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A835YUT5_9STRA1.660e-1240.48Copper transport protein n=1 Tax=Tribonema minus T... [more]
W7TTP6_9STRA1.410e-1037.82Copper transport protein n=1 Tax=Nannochloropsis g... [more]
A0A0L0D9P1_THETB1.680e-1034.44Copper transport protein n=1 Tax=Thecamonas trahen... [more]
A0A813BBW3_SYMMI1.740e-1038.76Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 97..138
e-value: 5.3E-6
score: 27.1
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 2..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availableTMHMMTMhelixcoord: 123..140
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7487contigH-paniculata_contig7487:3446..9460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7487.15468.1mRNA_H-paniculata_contig7487.15468.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7487 3259..10151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7487.15468.1 ID=prot_H-paniculata_contig7487.15468.1|Name=mRNA_H-paniculata_contig7487.15468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MSHDHGDHGSSMASDAGMISMGDMFCSGSGTVMLNGFQAASSESARCVLF
LFEGAVVDSATKYAFAVMGAFAIGFATEIIRYYRAVLAQKNGTNMDLALT
GAFVVQIFLAYALMLLVMLYEYVFLTFIILGLALGYFTTLRLTRARQAAA
AANGMKMAPLPASASSGSPCCNNDVCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter