mRNA_H-paniculata_contig7483.15466.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: D8LRL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL4_ECTSI) HSP 1 Score: 307 bits (787), Expect = 2.930e-101 Identity = 157/233 (67.38%), Postives = 185/233 (79.40%), Query Frame = 1
Query: 1 ACPAAPADSDLVPGVYEGGLKVWEASIDLVEYLAAELSVI-CGIDEEARGGNSSTGAGGD---TTVVLGCGHGFPGIMALRQGMHVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAA---------DRRLLCSDVSVVDTGKGNIREVLKVSWRE 660
ACP P +SDLVPG+YEGGLKVWEAS+DLVE+L + S G+D GG++S G+G + + LGCGHGFPGI+AL+QG+ VCFSDFNREVIEQVT+PNVRLNV+ +W +AEYY GDW SLSPLL+ERDGGG FDLILTAETLYT AVA+KVL M+ HL+ GQALVASKRFYFGTGGSTQ+FR + AA RRL+CSDV+V+DTGKGNIREVL+VSW E
Sbjct: 121 ACPGVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSCPVGLDG-GSGGDASVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVARHLAPGGQALVASKRFYFGTGGSTQYFREVIAARRCSAAAEASRRLVCSDVAVIDTGKGNIREVLRVSWEE 352
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A6H5JBA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA0_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.720e-98 Identity = 154/231 (66.67%), Postives = 180/231 (77.92%), Query Frame = 1
Query: 4 CPAAPADSDLVPGVYEGGLKVWEASIDLVEYLAAELSVI-CGIDE-EARGGNSSTGAGGDTTVV-LGCGHGFPGIMALRQGMHVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAA---------DRRLLCSDVSVVDTGKGNIREVLKVSWRE 660
CP P +SDLVPG+YEGGLKVWEAS+DLVE+L + S G+D G+ +G G +V+ LGCGHGFPGI+AL+QG+ VCFSDFNREVIEQVT+PNVRLNV+ +W +AEYY GDW SLSPLL+ERDGGG FDLILTAETLYT AVA+KVL M+ HL+ GQALVASKRFYFGTGGSTQ+FR AA RRL+CSD +V+DTGKGNIREVL+VSW E
Sbjct: 92 CPDVPEESDLVPGLYEGGLKVWEASLDLVEHLLSNSSSSPMGLDGGSGEDGSVGSGTGRPKSVLELGCGHGFPGIVALQQGVRVCFSDFNREVIEQVTIPNVRLNVEAHHWPLAEYYSGDWSSLSPLLEERDGGGLFDLILTAETLYTTAVADKVLDMVGRHLAPGGQALVASKRFYFGTGGSTQYFREAIAARCNSAAVEASRRLVCSDAAVIDTGKGNIREVLRVSWEE 322
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A835Z957_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z957_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.530e-54 Identity = 107/240 (44.58%), Postives = 135/240 (56.25%), Query Frame = 1
Query: 22 DSDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGMHVCFSDFNREVIEQVTVPNVRLNVQQEY-----------------------------WNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSW 654
++DLVPGVYEGGLKVWE S+DL+EY+ V G ++ A G + LGCGHG PG+ ALRQG HV F+D+NREV+E T+PNVR N + A +Y GDWG L +L + DG +FDLILTAETLYT ++ ++I L+ G ALVA+KR+YFG GGS HF+ L A + C V+DTG NIREVL VSW
Sbjct: 65 ETDLVPGVYEGGLKVWECSVDLIEYMLDRPEVY-GPEKMA----------GKRVIELGCGHGLPGVYALRQGAHVVFTDYNREVLEHATIPNVRANCPEALPSSLSIDTSGGRGGGMSAGQGSAQGVVNAGGRAAFYFGDWGGLPEMLAD-DGEERFDLILTAETLYTATATVQIHRLIETLLAPGGHALVAAKRYYFGCGGSCAHFKQLVAPP--MACETACVIDTGVANIREVLLVSW 290
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A1V9YGQ4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGQ4_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.070e-49 Identity = 96/212 (45.28%), Postives = 130/212 (61.32%), Query Frame = 1
Query: 25 SDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGM-HVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSWR 657
SDL GVYEGG K+WE S+DL+EYL A +EA G G + LGCGHG PGI AL+QG HV FSD+N EVI+ T+PN + V + N A +Y GDWG +S + + ++DLILTAETLYT V +L+ I HL G ALVA+K +YFGTGGS H ++L AA ++ + V + + NIRE+++V+++
Sbjct: 77 SDLETGVYEGGFKLWECSVDLIEYLEAH--------KEAFG----IGTRSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPNAQ-RVASAHLNRATFYSGDWGHMSAAMTAANEDTEYDLILTAETLYTEEVTIALLETIKRHLKPSGVALVAAKTYYFGTGGSVHHLKSLIAATGTMVATTVWNGNDCRSNIREIVQVTYK 275
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A7S3HG77_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG77_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.230e-48 Identity = 100/212 (47.17%), Postives = 124/212 (58.49%), Query Frame = 1
Query: 22 DSDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGM-HVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSP-LLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVS 651
++D++PGVYEGG KVWE S+DL L L C + E + + LGCGHGFPG+ AL+ G V FSD N EVI VT PN+ LN + + N AE Y GDW LS +L G+FDLIL+AETLYT A K+L MIL HLS+ G AL+ASKRFYFG GG T TL A L V G NIRE+++++
Sbjct: 77 ETDIIPGVYEGGYKVWECSVDLTAML---LQKACTLPELST----------CRAIELGCGHGFPGVAALKLGCPRVVFSDLNAEVINAVTWPNIFLNAR-DIMNRAECYSGDWDELSSTVLSRGSDDGKFDLILSAETLYTEASCNKILSMILRHLSNTGVALIASKRFYFGVGGGTYTLETLVQACGVLNYHVEQVYQDGASNIREIVRLT 274
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A024UPA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPA8_9STRA) HSP 1 Score: 167 bits (424), Expect = 8.630e-48 Identity = 92/212 (43.40%), Postives = 126/212 (59.43%), Query Frame = 1
Query: 25 SDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGM-HVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQ-ALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSW 654
SD+ GVYEGG K+WE ++DL++YLAA + G + LGCGHG PG+ AL+QG HV FSD+N EVIE T+PN++ N A +Y GDW +S + +FDLILTAET+YT +V+ ++ Q I HL RG ALVA+K +YFGTGGS HF++L A D ++ V + K N+RE++ VS+
Sbjct: 85 SDIQTGVYEGGFKLWECAVDLIQYLAANAPNL-------------PVHNGWRVLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANANDLTKATFYSGDWQLMSEDMLAHGTDMEFDLILTAETIYTESVSVELFQTIQRHLKRRGGIALVAAKSYYFGTGGSVHHFKSLVAQDGTMVARTVWESNDAKSNVREIVHVSY 283
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: T0R0A7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0A7_SAPDV) HSP 1 Score: 164 bits (415), Expect = 1.430e-46 Identity = 92/211 (43.60%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 28 DLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGM-HVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSWR 657
DL GVYEGG K+WE SIDL+EYL + + GA G + LGCGHG PGI AL+QG HV FSD+N EVIE T+PN + + + A +Y GDW ++S + + +DL+LTAETLYT V +L MI HL G ALVA+K +YFGTGGS HF+ L A + ++ + V + + NIRE+++V+++
Sbjct: 77 DLETGVYEGGFKLWECSIDLIEYL------------QQHQADFPIGACGLRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPNT-MRCAGDRLHHASFYSGDWANVSEAMAANEDAS-YDLVLTAETLYTEDVTISLLAMIKRHLKRSGVALVAAKTYYFGTGGSVHHFKDLVAREGDMVATTVWNGNDCRSNIREIVQVTYK 273
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: M4BGT3_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGT3_HYAAE) HSP 1 Score: 163 bits (413), Expect = 4.280e-46 Identity = 93/217 (42.86%), Postives = 130/217 (59.91%), Query Frame = 1
Query: 25 SDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVVLGCGHGFPGIMALRQGMH-VCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDERD----GGGQFDLILTAETLYTIAVAEKVLQMILHHL--SSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSW 654
+D+ GVYEGG K+WE ++DLV+ L + +G S + + LGCGHG PGI AL+QG V FSD+N+EV+E T PNVR NV ++ + AE+Y G W S+S ++ + QFDLILTAET+YT AVA ++ Q I HL + +ALVA+K++YFGT GS QHF L AD V G+ NIRE++++++
Sbjct: 82 TDVQTGVYEGGFKLWECALDLVKLLETQ---------RRQGATMSA-----SVLELGCGHGLPGIYALQQGAELVTFSDYNKEVLELTTCPNVRQNVDEQVFERAEFYAGAWSSMSQYMETMELKTQDQMQFDLILTAETIYTDAVAVELYQTIKRHLRRAPNARALVAAKKYYFGTNGSVQHFVGLVRADGVFTADTVWQERDGRSNIREIVQLTY 284
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: A0A225WHC1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHC1_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.680e-45 Identity = 97/218 (44.50%), Postives = 131/218 (60.09%), Query Frame = 1
Query: 25 SDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVV-LGCGHGFPGIMALRQGM-HVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDE----RDGGGQFDLILTAETLYTIAVAEKVLQMILHHL--SSRGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSW 654
SD+ GVYEGG K+WE ++DLV ++ A+L G T+V+ LGCGHG PGI AL +G V FSD+N+EV+E T PNV NVQQ Y + AE+Y G W S+S ++E D QFDLILTAET+YT AVA ++ Q I HL + +ALVA+K++YFGT GS QHF L ++ V K NIRE++++++
Sbjct: 52 SDVQTGVYEGGFKLWECAVDLVTFVEAQLR---------------QGVAMPTSVLELGCGHGLPGIHALLRGAKRVVFSDYNKEVLELTTCPNVLRNVQQSY-DRAEFYAGAWSSMSTFMEEVEHRTDEQMQFDLILTAETIYTEAVAVELYQTIKRHLRRAPHARALVAAKKYYFGTNGSVQHFVGLVRSEGVFRAETVWEERDCKSNIREIVQLTY 253
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Match: G5A449_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A449_PHYSP) HSP 1 Score: 160 bits (406), Expect = 5.740e-45 Identity = 95/218 (43.58%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 25 SDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGNSSTGAGGDTTVV-LGCGHGFPGIMALRQG-MHVCFSDFNREVIEQVTVPNVRLNVQQEYWNMAEYYCGDWGSLSPLLDE----RDGGGQFDLILTAETLYTIAVAEKVLQMILHHLSS--RGQALVASKRFYFGTGGSTQHFRTLAAADRRLLCSDVSVVDTGKGNIREVLKVSW 654
SD+ GVYEGG K+WE ++DLV ++ A+L GA V+ LGCGHG PGI AL++G V FSD+N+EV+E T PNVR NV + ++ AE+Y G W S++ + + + QFDLILTAET+YT AVA ++ Q I HL +ALVA+K++YFGT GS QHF L AD L V + NIRE++++S+
Sbjct: 90 SDVQTGVYEGGFKLWECAVDLVRFVEAQLR--------------QDGAQMPPAVLELGCGHGLPGIHALQRGAQRVVFSDYNKEVLELTTSPNVRRNVSDQLYSKAEFYAGAWSSMTEYMRDVEHLSEDQMQFDLILTAETIYTEAVAVELYQTIKRHLRRVPHARALVAAKKYYFGTNGSVQHFVGLVQADGVLRAETVWEERNCRSNIREIVQLSY 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7483.15466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7483.15466.1 >prot_H-paniculata_contig7483.15466.1 ID=prot_H-paniculata_contig7483.15466.1|Name=mRNA_H-paniculata_contig7483.15466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp ACPAAPADSDLVPGVYEGGLKVWEASIDLVEYLAAELSVICGIDEEARGGback to top mRNA from alignment at H-paniculata_contig7483:345..4372- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7483.15466.1 ID=mRNA_H-paniculata_contig7483.15466.1|Name=mRNA_H-paniculata_contig7483.15466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4028bp|location=Sequence derived from alignment at H-paniculata_contig7483:345..4372- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7483:345..4372- >mRNA_H-paniculata_contig7483.15466.1 ID=mRNA_H-paniculata_contig7483.15466.1|Name=mRNA_H-paniculata_contig7483.15466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig7483:345..4372- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |