prot_H-paniculata_contig7482.15465.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7482.15465.1
Unique Nameprot_H-paniculata_contig7482.15465.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S3YK14_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YK14_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 1.050e-19
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPE 50
            + KLQV+PL+ QLT +SGNLWART +G RAERIEYLL+HEFH LKY+TPE
Sbjct:   27 LLKLQVLPLTKQLTCISGNLWARTCKGNRAERIEYLLMHEFHNLKYITPE 76          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 88.2 bits (217), Expect = 4.330e-19
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEKVF 53
            MFKLQVVPL+ QLT +SGNLW+RT++G RAERIEYLLLHEFH LKY+ PE+ F
Sbjct:  639 MFKLQVVPLTKQLTCISGNLWSRTIKGARAERIEYLLLHEFHSLKYILPERKF 691          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: I1BTM6_RHIO9 (DNA polymerase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTM6_RHIO9)

HSP 1 Score: 86.3 bits (212), Expect = 2.060e-18
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEKVF 53
            MFKLQV+PL+ QLTAL+GNLWARTM G RAER E+LLLHEFHK KY+ P+K F
Sbjct:  685 MFKLQVLPLTHQLTALAGNLWARTMTGARAERNEFLLLHEFHKAKYICPDKTF 737          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S0JJ81_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJ81_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 2.170e-18
Identity = 35/51 (68.63%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEK 51
            MFK+QV+PL+ QLTAL+GN+W+++++G RAERIEYLLLHEFH+LKY+ P+K
Sbjct:  113 MFKMQVLPLTKQLTALAGNMWSKSLQGKRAERIEYLLLHEFHRLKYVVPDK 163          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 2.810e-18
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEK 51
            MFKLQ++PL+ QLT ++GNLWARTM+G RAER EYLLLHEFH LKYL PEK
Sbjct:  428 MFKLQILPLTKQLTNIAGNLWARTMKGNRAERNEYLLLHEFHNLKYLVPEK 478          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S2PC81_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PC81_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.540e-18
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEKV 52
            M KLQV+PL+ QLT ++GNLWARTMRG RAER EYLLLHEFH+LKYL P K+
Sbjct:  212 MLKLQVLPLTKQLTNIAGNLWARTMRGHRAERCEYLLLHEFHRLKYLVPSKL 263          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S2UH04_9STRA (DNA polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH04_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.840e-18
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEK 51
            MFKLQ++PLS QLT +SGNLWARTM+G RAER ++LLLHEFH LKY+ PEK
Sbjct:  871 MFKLQILPLSKQLTCISGNLWARTMKGNRAERNDFLLLHEFHNLKYIVPEK 921          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A139B040_GONPJ (DNA polymerase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139B040_GONPJ)

HSP 1 Score: 85.1 bits (209), Expect = 5.250e-18
Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEKVF 53
            MFK+Q++PLS QLT L+GNLW+RT+ GGRAER E+LLLHEFHKLKY+ P+K F
Sbjct:  782 MFKIQILPLSKQLTNLAGNLWSRTLMGGRAERNEFLLLHEFHKLKYILPDKSF 834          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.250e-18
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEK 51
            MFKLQV+PL+ QLT ++GNLW RTM+G RAER EYLLLHEFH+LKYL PEK
Sbjct:  836 MFKLQVLPLTKQLTNIAGNLWGRTMKGNRAERNEYLLLHEFHQLKYLVPEK 886          
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Match: A0A7S0PUL5_9EUKA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PUL5_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 6.780e-18
Identity = 37/51 (72.55%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPEK 51
            MFK+QV+PL+ QLT L+GNLWA++++G RAERIEYLLLHEFHKLKY+ P+K
Sbjct:  227 MFKMQVLPLTKQLTTLAGNLWAKSLQGKRAERIEYLLLHEFHKLKYVVPDK 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7482.15465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3YK14_HETAK1.050e-1974.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A482T3C7_9ARCH4.330e-1975.47DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
I1BTM6_RHIO92.060e-1875.47DNA polymerase n=1 Tax=Rhizopus delemar (strain RA... [more]
A0A7S0JJ81_9EUKA2.170e-1868.63Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
B8LEG9_THAPS2.810e-1876.47DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A7S2PC81_9STRA3.540e-1875.00DNA-directed DNA polymerase (Fragment) n=1 Tax=Lep... [more]
A0A7S2UH04_9STRA3.840e-1874.51DNA polymerase n=1 Tax=Attheya septentrionalis Tax... [more]
A0A139B040_GONPJ5.250e-1871.70DNA polymerase n=1 Tax=Gonapodya prolifera (strain... [more]
A0A7S2L169_9STRA5.250e-1876.47DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=2... [more]
A0A7S0PUL5_9EUKA6.780e-1872.55DNA-directed DNA polymerase (Fragment) n=1 Tax=Coc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.1090coord: 6..51
e-value: 5.8E-24
score: 85.2
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 1..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7482contigH-paniculata_contig7482:70..228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7482.15465.1mRNA_H-paniculata_contig7482.15465.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7482 70..243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7482.15465.1 ID=prot_H-paniculata_contig7482.15465.1|Name=mRNA_H-paniculata_contig7482.15465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MFKLQVVPLSCQLTALSGNLWARTMRGGRAERIEYLLLHEFHKLKYLTPE
KVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf