prot_H-paniculata_contig7481.15464.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7481.15464.1
Unique Nameprot_H-paniculata_contig7481.15464.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: D7FL35_ECTSI (Similar to Rho GTPase activating protein 24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL35_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.780e-33
Identity = 71/114 (62.28%), Postives = 87/114 (76.32%), Query Frame = 0
Query:  145 KGKVFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVE------GEPECLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            K KVFGVPL+ +M+      VPWV+KRFV FLSKFGL+SVGLFRLAGDG+D A LR+ALD+G+QV WDP++ ++      G  +C      +VNMVAQLLKAFFRELPEPL+PF
Sbjct: 1105 KDKVFGVPLIGLMQQ--GEQVPWVVKRFVDFLSKFGLESVGLFRLAGDGMDCADLRDALDNGKQVCWDPIDPIDEAEGSTGATDCASSSLMDVNMVAQLLKAFFRELPEPLVPF 1216          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: A0A6H5JEV0_9PHAE (Rho-GAP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV0_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 9.420e-33
Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 0
Query:  145 KGKVFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPE------CLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            K KVFGVPL+ +M+      VPWV+KRFV FLSKFGL+SVGLFRLAGDG+D A LR+ALD+G+QV WDP++ ++   E      C      +VNMVAQLLKAFFRELPEPL+PF
Sbjct: 1054 KNKVFGVPLIGLMQQ--GEQVPWVVKRFVDFLSKFGLESVGLFRLAGDGMDCADLRDALDNGKQVCWDPMDPIDETEESTKATVCASSSLMDVNMVAQLLKAFFRELPEPLVPF 1165          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: A0A835Z007_9STRA (Rho-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z007_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.490e-21
Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 0
Query:  136 VRRVVPPDPKGKVFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFG-LDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            V R  PPDP+G V GV   ++M      +VPWV+ R + FL   G LD+VGLFR+AGDG++   LR A++  QQV WDP E   G+    +L   +  +VAQLLKA+FRELPEP++P+
Sbjct: 1052 VLRRGPPDPRGPVMGV---DIMAAVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPY 1166          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: UPI0018D7504D (SLIT-ROBO Rho GTPase-activating protein 1-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7504D)

HSP 1 Score: 68.6 bits (166), Expect = 1.570e-9
Identity = 43/119 (36.13%), Postives = 69/119 (57.98%), Query Frame = 0
Query:  137 RRVVPPDPKG----KVFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLP 251
            R+  PP PK     ++FG  L E + +T   D+P V++  V  +S +GL  +G+FR+ G   + A++REA + G+    DP E ++        +  ++N+VA +LK +FRELPEPL P
Sbjct:  466 RKQKPPRPKSVHSARLFGGNLQEYLEIT-GRDIPTVVQSCVECVSLYGLHHMGIFRMPGAHQEIAEMREAFEKGE----DPFESLD--------EKADINLVASVLKLYFRELPEPLFP 571          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: L8H734_ACACA (RhoGAP domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H734_ACACA)

HSP 1 Score: 65.9 bits (159), Expect = 1.230e-8
Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  145 KGKVFGVPLVEVMRMT----PALDVPWVLKRFVGFLSKF-GLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLL 250
            KG+V+GV L EVM       P L VP V+ R +  L K  G  S G+FR AG  +   QLR   + G+ + +       GE        +N+N VA LLKAF RELPEPLL
Sbjct:   74 KGRVYGVSLEEVMERQRESHPTLQVPLVIARALEVLHKQNGAMSEGIFREAGSTMQMNQLRARFEKGEPIDFS------GE--------KNINNVANLLKAFLRELPEPLL 170          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: A0A8C4NBR0_EPTBU (Rho GTPase activating protein 5 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4NBR0_EPTBU)

HSP 1 Score: 63.9 bits (154), Expect = 6.100e-8
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  149 FGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            FG PL E+++    L +P  +++ V ++   GL   GL+R+ G+  ++  L+   D+   +S++ +E              NVN+VA LLKAFF ELPEPLLP+
Sbjct: 1190 FGHPLNELLQSLEQL-IPLFVEKCVDYIEAKGLSQEGLYRVCGNKAEQDALQRKFDTDHNISFEAME-------------ANVNVVAGLLKAFFSELPEPLLPY 1279          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: UPI0014034A8B (rho GTPase-activating protein 5 isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014034A8B)

HSP 1 Score: 63.9 bits (154), Expect = 6.130e-8
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  149 FGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            FGVPL EV+  TP   VP  ++R V ++   GL++ GL+R++G+  D+  ++   D    +              LV     VN VA  LKAFF +LPEPL+P+
Sbjct: 1259 FGVPLEEVV--TPDNPVPAFIERCVEYIESTGLNNEGLYRVSGNRTDQDNIQRQFDQDHNID-------------LVAMDVTVNAVAGALKAFFSDLPEPLIPY 1347          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: A0A5C6NBL5_9TELE (Breakpoint cluster region protein n=3 Tax=Takifugu TaxID=31032 RepID=A0A5C6NBL5_9TELE)

HSP 1 Score: 63.2 bits (152), Expect = 1.010e-7
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0
Query:  148 VFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLP 251
            VFGVP+  V R    L VP V++  V  + + G+D VG++R++G  LD + L+ A DS  + +   L   E            VN+V  +LK +FRELPEPL+P
Sbjct:  623 VFGVPIAAVARQEGGL-VPHVVRCCVEEVERRGMDEVGIYRVSGGALDISTLKAAFDSNLREAVTRLRSAE------------VNVVCGVLKLYFRELPEPLVP 713          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: UPI001EB0420F (protein FAM13A-like isoform X2 n=12 Tax=Haliotis TaxID=6452 RepID=UPI001EB0420F)

HSP 1 Score: 63.2 bits (152), Expect = 1.070e-7
Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 0
Query:  137 RRVVPPDPKGKVFGVPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLP 251
            R++VP +   K FG PL  +++ +P   +P ++K+   F+S++G+D  G+FR+ G+     +LR + D      WD     + E +C      +V  VA LLK F RELP+ ++P
Sbjct:   60 RKLVPSNNVNKTFGAPLDVLVKRSPNCLIPSIVKKTCDFISRYGMDQEGIFRVNGNSRVLEKLRYSFDQ----HWD----TDIEEDC------DVMAVAGLLKLFLRELPDTVIP 160          
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Match: UPI0009E3E2CF (rho GTPase-activating protein 24-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3E2CF)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-7
Identity = 41/120 (34.17%), Postives = 64/120 (53.33%), Query Frame = 0
Query:  136 VRRVVPPDPKGKVFGVPLVEVMRMTPALD---VPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLREALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLLPF 252
            + R++     G +FG  L E +R         VP+++++ V F+   GL   GLFRL G   + A+L++A + G            G PE    + E V+ VA +LK++FRELPEPL+P+
Sbjct:  119 INRIIYAPVGGGMFGRSLAETVRFETRRGGGYVPFIVQKCVDFIRANGLSEEGLFRLPGQAKNVAELKDAFNRG------------GSPELESNKAE-VHSVASVLKSYFRELPEPLIPY 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7481.15464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL35_ECTSI2.780e-3362.28Similar to Rho GTPase activating protein 24 n=1 Ta... [more]
A0A6H5JEV0_9PHAE9.420e-3362.28Rho-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835Z007_9STRA3.490e-2148.31Rho-GAP domain-containing protein n=1 Tax=Tribonem... [more]
UPI0018D7504D1.570e-936.13SLIT-ROBO Rho GTPase-activating protein 1-like iso... [more]
L8H734_ACACA1.230e-842.34RhoGAP domain containing protein n=1 Tax=Acanthamo... [more]
A0A8C4NBR0_EPTBU6.100e-835.58Rho GTPase activating protein 5 n=2 Tax=Eptatretus... [more]
UPI0014034A8B6.130e-836.54rho GTPase-activating protein 5 isoform X1 n=2 Tax... [more]
A0A5C6NBL5_9TELE1.010e-738.46Breakpoint cluster region protein n=3 Tax=Takifugu... [more]
UPI001EB0420F1.070e-733.04protein FAM13A-like isoform X2 n=12 Tax=Haliotis T... [more]
UPI0009E3E2CF1.100e-734.17rho GTPase-activating protein 24-like isoform X1 n... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 166..252
e-value: 3.6E-14
score: 52.9
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 151..252
score: 20.287
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 137..252
e-value: 2.6E-22
score: 81.1
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 144..252
NoneNo IPR availablePANTHERPTHR23176RHO/RAC/CDC GTPASE-ACTIVATING PROTEINcoord: 57..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7481contigH-paniculata_contig7481:619..8260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7481.15464.1mRNA_H-paniculata_contig7481.15464.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7481 619..8260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7481.15464.1 ID=prot_H-paniculata_contig7481.15464.1|Name=mRNA_H-paniculata_contig7481.15464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
HRTTSSRIGPGIQALLSTVGTAPKAAAAATAEIASTGGGQSKGKGKGKGF
DASGASPGLGGGRATRSYRCDAGGMRQALLEHKDSMRRAVAAAAAAASAE
AAASGSGGGGGSRVGGGGWGVESGASAAAAGGGVPVRRVVPPDPKGKVFG
VPLVEVMRMTPALDVPWVLKRFVGFLSKFGLDSVGLFRLAGDGLDRAQLR
EALDSGQQVSWDPLEEVEGEPECLVLQGENVNMVAQLLKAFFRELPEPLL
PF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot