mRNA_H-paniculata_contig7478.15460.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: D7G4W6_ECTSI (Acireductone dioxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4W6_ECTSI) HSP 1 Score: 154 bits (390), Expect = 4.720e-40 Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQFV 560
RYILEGSGYFDVRA+DE+W+RI M KGDMITLPAG+YHRFTLDD NYIKAMRLFVGEPVWTPLNRPQD+HP+RK Y+ F
Sbjct: 98 RYILEGSGYFDVRAKDERWVRIKMSKGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPVRKDYLANFA 178
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: UPI00145597EF (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145597EF) HSP 1 Score: 142 bits (359), Expect = 8.520e-36 Identity = 64/80 (80.00%), Postives = 70/80 (87.50%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQF 557
R ILEG+GYFDVR + ++WIRI M KGDMITLPAG+YHRFTLD KNYIKAMRLFVGEPVWTP+NRP DEHP RKGYVQ
Sbjct: 96 RLILEGTGYFDVRDKADQWIRIEMAKGDMITLPAGIYHRFTLDTKNYIKAMRLFVGEPVWTPINRPADEHPQRKGYVQSL 175
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: MTND2_PHYPA (Acireductone dioxygenase 2 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=MTND2_PHYPA) HSP 1 Score: 142 bits (358), Expect = 1.820e-35 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQFVIP 566
RY L+GSGYFDVR ++ WIRI + KGDMI LPAG YHRFTLD+ NYI AMRLFVGEP+WTP NRPQDEHP+RKGYV QF+ P
Sbjct: 102 RYCLDGSGYFDVRDPEDHWIRIWVRKGDMIVLPAGCYHRFTLDEHNYIMAMRLFVGEPIWTPYNRPQDEHPVRKGYVHQFLQP 184
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A091TZF1_PELCR (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A091TZF1_PELCR) HSP 1 Score: 139 bits (350), Expect = 4.410e-35 Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQ 551
RYIL+GSGYFDVR +D+KWIRISM KGDMITLPAG+YHRFTLD+ NY+KAMRLFVGEPVWTP NRP D+ P RK Y++
Sbjct: 56 RYILDGSGYFDVRDEDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTPYNRPADDFPARKRYLK 133
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A2I0MTK7_COLLI (Acireductone dioxygenase n=4 Tax=Neognathae TaxID=8825 RepID=A0A2I0MTK7_COLLI) HSP 1 Score: 139 bits (349), Expect = 7.520e-35 Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQ 551
RYIL+GSGYFDVR +D+KWIRISM KGDMITLPAG+YHRFTLD+ NY+KAMRLFVGEPVWTP NRP D+ P RK Y++
Sbjct: 62 RYILDGSGYFDVRDKDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTPYNRPADDFPARKQYLK 139
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A852AI75_9CORV (MTND dioxygenase (Fragment) n=1 Tax=Chloropsis cyanopogon TaxID=1218682 RepID=A0A852AI75_9CORV) HSP 1 Score: 138 bits (348), Expect = 8.620e-35 Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQ 551
RYILEGSGYFDVR QD+KWIRISM KGDMITLPAG+YHRFTLD+ NY+KAMRLFVGEPVWT NRP D+ P RK Y++
Sbjct: 56 RYILEGSGYFDVRDQDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTAYNRPADDFPARKQYMK 133
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A0U9HMK5_KLENI (Acireductone dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMK5_KLENI) HSP 1 Score: 141 bits (355), Expect = 8.890e-35 Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQFV 560
RY L+GSGYFDVR ++KWIRI + KGDMI LPAGMYHRFTLD+ NYIKA+RLFVGEPVWTP+NRP D+HPIRK YV FV
Sbjct: 128 RYCLDGSGYFDVRDANDKWIRILVRKGDMIVLPAGMYHRFTLDENNYIKALRLFVGEPVWTPINRPVDDHPIRKSYVDAFV 208
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A7K5AEC8_9AVES (MTND dioxygenase (Fragment) n=1 Tax=Centropus unirufus TaxID=1118519 RepID=A0A7K5AEC8_9AVES) HSP 1 Score: 136 bits (343), Expect = 1.300e-34 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQFV 560
RYILEGSGYFDVR QD+KWIRISM KGDMITLPAG+YHRFT+D+ NY+KAMRLF GEPVWT NRP D+ P RK Y++
Sbjct: 17 RYILEGSGYFDVRDQDDKWIRISMEKGDMITLPAGIYHRFTVDENNYVKAMRLFAGEPVWTAYNRPADDFPARKRYLKSLA 97
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A7K6R9S2_9PASS (MTND dioxygenase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K6R9S2_9PASS) HSP 1 Score: 137 bits (346), Expect = 1.630e-34 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQ 551
RYILEGSGYFDVR +D+KWIRISM KGDMITLPAG+YHRFTLD+ NY+KAMRLFVGEPVWT NRP D+ P RK Y++
Sbjct: 56 RYILEGSGYFDVRDKDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTAYNRPADDFPARKQYIK 133
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Match: A0A5J4XYY7_9CHLO (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XYY7_9CHLO) HSP 1 Score: 138 bits (348), Expect = 1.680e-34 Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 3
Query: 318 RYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRFTLDDKNYIKAMRLFVGEPVWTPLNRPQDEHPIRKGYVQQFV 560
RYILEGSGYFDVR + ++WIRI++ KGDMI LP G+YHRFTLD+ NY+KAMRLFVGEPVWTP NRPQD+ P RK YVQ F+
Sbjct: 77 RYILEGSGYFDVRDKQDRWIRIALNKGDMIVLPEGIYHRFTLDEVNYVKAMRLFVGEPVWTPFNRPQDDKPSRKKYVQTFL 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7478.15460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7478.15460.1 >prot_H-paniculata_contig7478.15460.1 ID=prot_H-paniculata_contig7478.15460.1|Name=mRNA_H-paniculata_contig7478.15460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MDECSWTMTTSRYILEGSGYFDVRAQDEKWIRISMGKGDMITLPAGMYHRback to top mRNA from alignment at H-paniculata_contig7478:748..4661- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7478.15460.1 ID=mRNA_H-paniculata_contig7478.15460.1|Name=mRNA_H-paniculata_contig7478.15460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3914bp|location=Sequence derived from alignment at H-paniculata_contig7478:748..4661- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7478:748..4661- >mRNA_H-paniculata_contig7478.15460.1 ID=mRNA_H-paniculata_contig7478.15460.1|Name=mRNA_H-paniculata_contig7478.15460.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig7478:748..4661- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |