prot_H-paniculata_contig12438.1529.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12438.1529.1
Unique Nameprot_H-paniculata_contig12438.1529.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12438.1529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..102
NoneNo IPR availableTMHMMTMhelixcoord: 10..43
NoneNo IPR availableTMHMMTMhelixcoord: 56..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12438contigH-paniculata_contig12438:4141..4548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12438.1529.1mRNA_H-paniculata_contig12438.1529.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12438 4141..4956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12438.1529.1 ID=prot_H-paniculata_contig12438.1529.1|Name=mRNA_H-paniculata_contig12438.1529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MPTSASTSTSTITITITIIAILIFTNTLLNILHFLIHILLVIIHNILHRR
CRHHRFLFLFLFILPIIYIHPIRRRRLALRRRLDLSHSILRYPSLVIIQL
VPRRRRHGSSHISERSSRSGTVTTRGDSGAVVCMR*
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