prot_H-paniculata_contig12436.1528.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12436.1528.1
Unique Nameprot_H-paniculata_contig12436.1528.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Match: A0A6H5JG00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG00_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.820e-29
Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    5 RLAEDTFKQAVEADPLHSESWNGLGS-VSRDPLVQQHCWVRSVQLAHNPSAWANLGMLYIRWGLDIQ 70
            R AE+ F+++VEADP +SE+WNGLG+ +S+ PLVQQHCWVRSVQL HNPSAWANLGMLY+RWG+DIQ
Sbjct:  446 RSAEEAFRRSVEADPAYSEAWNGLGATMSQKPLVQQHCWVRSVQLEHNPSAWANLGMLYVRWGMDIQ 512          
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 9.810e-29
Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    5 RLAEDTFKQAVEADPLHSESWNGLGS-VSRDPLVQQHCWVRSVQLAHNPSAWANLGMLYIRWGLDIQ 70
            R AE+ F+++VEADP +SE+WNGLG+ +S  PLVQQHCWVRSVQL HNPSAWANLGMLY+RWG+DIQ
Sbjct:  967 RSAEEAFRRSVEADPAYSEAWNGLGATMSGRPLVQQHCWVRSVQLEHNPSAWANLGMLYVRWGMDIQ 1033          
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Match: A0A3M7NBL5_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 135597 TaxID=2249420 RepID=A0A3M7NBL5_9EURO)

HSP 1 Score: 53.9 bits (128), Expect = 1.150e-6
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   11 FKQAVEADPLHSESWNGLGSVSR--DPLVQQHCWVRSVQL-AHNPSAWANLGMLYI 63
            FK+A+E +  +SE WN LG V+   +P V QH +VRS+ L  H+   W NLG+LY+
Sbjct:  922 FKRAIELEAGNSEFWNALGLVTMTLNPKVSQHSFVRSLHLNEHSARTWTNLGVLYL 977          
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Match: A0A3M0W0G4_9EURO (Uncharacterized protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 134920 TaxID=2249417 RepID=A0A3M0W0G4_9EURO)

HSP 1 Score: 52.4 bits (124), Expect = 4.020e-6
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   11 FKQAVEADPLHSESWNGLGSVSR--DPLVQQHCWVRSVQLA-HNPSAWANLGMLYI 63
            FK+A+E +  ++E WN LG V+   +P V QH +VRS+ L  H+   W NLG+LY+
Sbjct:  923 FKRAIELEAGNAEFWNALGLVTMTLNPKVSQHSFVRSLHLNDHSSRTWTNLGVLYL 978          
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Match: A0A293MWB5_ORNER (Tetratricopeptide repeat protein 37 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MWB5_ORNER)

HSP 1 Score: 51.6 bits (122), Expect = 7.500e-6
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   10 TFKQAVEADPLHSESWNGLGSVS-----RDPLVQQHCWVRSVQLAH-NPSAWANLGMLYI 63
            + ++AV  +P    +WN LG V+     ++  + QHC ++SVQL   NP+AWANLG LY+
Sbjct:  487 SVQKAVSLNPADPAAWNMLGVVALAKDIKNGALAQHCLIKSVQLESCNPTAWANLGALYL 546          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12436.1528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JG00_9PHAE2.820e-2974.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G059_ECTSI9.810e-2974.63Similar to Tetratricopeptide repeat protein 37 (TP... [more]
A0A3M7NBL5_9EURO1.150e-646.43Uncharacterized protein (Fragment) n=1 Tax=Chaetot... [more]
A0A3M0W0G4_9EURO4.020e-644.64Uncharacterized protein (Fragment) n=1 Tax=Chaetot... [more]
A0A293MWB5_ORNER7.500e-641.67Tetratricopeptide repeat protein 37 (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039226Ski3/TTC37PANTHERPTHR15704SUPERKILLER 3 PROTEIN-RELATEDcoord: 5..64
NoneNo IPR availablePANTHERPTHR15704:SF7TETRATRICOPEPTIDE REPEAT PROTEIN 37coord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12436contigH-paniculata_contig12436:249..464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12436.1528.1mRNA_H-paniculata_contig12436.1528.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12436 249..464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12436.1528.1 ID=prot_H-paniculata_contig12436.1528.1|Name=mRNA_H-paniculata_contig12436.1528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MQTGRLAEDTFKQAVEADPLHSESWNGLGSVSRDPLVQQHCWVRSVQLAH
NPSAWANLGMLYIRWGLDIQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039226Ski3/TTC37