prot_H-paniculata_contig12430.1526.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12430.1526.1
Unique Nameprot_H-paniculata_contig12430.1526.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length940
Homology
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BLAST of mRNA_H-paniculata_contig12430.1526.1 vs. uniprot
Match: A0A6H5JK83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK83_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.980e-25
Identity = 77/170 (45.29%), Postives = 101/170 (59.41%), Query Frame = 0 
Query:  775 PLQKQAGVTLMYKQIEWNLTALMNTLRGYWLASGVAPVLRGGVARAAEEFSMVCGFSASFGPLLLRKAVGGEQVYAR-YNMGYDHMPFQYVMTKFEKFFEKEIVKCDAAERFFRLARKDS-----HSEHVTRADLHPFILSIAQRHPDLTELSVQEISIYVDTVLATIFY 938
            PLQ   G TLMY   E++L  LM  L+G+ L  G A V  GG+ R AE FS  CGFSA+FGP++L+       VY R +  G   +P  +V+  F +++EKEI   DA ERFF+L + DS      S  + R +L  F+L+IA RHPDL  LS +   IYVDTVL  +FY
Sbjct:  439 PLQLVEGKTLMYDPREFDLWPLMFQLQGWSLELGTADVWGGGIEREAEAFSAACGFSAAFGPIVLKLVT--TAVYGRVFAGGVTVLPMNHVLYAFGQYWEKEIGPRDATERFFKLVKIDSGTRASSSGRIGREELRQFVLAIALRHPDLDALSPENKFIYVDTVLTILFY 606
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BLAST of mRNA_H-paniculata_contig12430.1526.1 vs. uniprot
Match: D7FYR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR0_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 7.530e-24
Identity = 79/188 (42.02%), Postives = 103/188 (54.79%), Query Frame = 0 
Query:  752 GSSLRLPPSRKHIEKKPDEFQIFPLQKQAGVTLMYKQIEWNLTALMNTLRGYWLASGVAPVLRGGVARAAEEFSMVCGFSASFGPLLLRKAVGGEQVYAR-YNMGYDHMPFQYVMTKFEKFFEKEIVKCDAAERFFRLARKDSHSEHVTRADLHPFILSIAQRHPDLTELSVQEISIYVDTVLATIFY 938
            G S    PS +    + D     PLQ   G TLMY   E++L  LM  L+G+ L  G A V  GGV R AE FS  CGFSA+FGP++L+       VY R +  G   +P  +V+  F +++EKEI   DA ERFF+L +++          L  F+L+IA RHPDL  L     SIYVDTVL  +FY
Sbjct:  420 GPSTSEEPSSERDPPRLDHHVPHPLQLVEGKTLMYDPREFDLWPLMVQLQGWSLELGTADVWGGGVEREAEAFSAACGFSAAFGPIVLKLVT--TAVYGRVFAGGVSVLPMDHVVYAFGQYWEKEIGPRDATERFFKLVKEE----------LRRFVLAIALRHPDLDALPPDNKSIYVDTVLTILFY 595
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12430.1526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK83_9PHAE1.980e-2545.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYR0_ECTSI7.530e-2442.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 630..650
NoneNo IPR availableGENE3D1.10.238.220coord: 873..940
e-value: 3.4E-5
score: 25.5
IPR041534PP2A regulatory subunit B'', EF-hand domainPFAMPF17958EF-hand_13coord: 880..939
e-value: 1.6E-5
score: 24.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12430contigH-paniculata_contig12430:3924..7178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12430.1526.1mRNA_H-paniculata_contig12430.1526.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12430 3896..7178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12430.1526.1 ID=prot_H-paniculata_contig12430.1526.1|Name=mRNA_H-paniculata_contig12430.1526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=940bp
MPQTLRTPLAAVLHVVNETHPRAWIDGHYLTELRQPTAYVPVTEFDSEIG
LLTKWPPQVRHRRAKWSKGVFEACERTSRKADAATAVAVIQKMWRSPSVL
PRRARITTRRIDETLVLLDWLADIRQCAKYCNIFERRVQAHHRRYPHLRE
TSNLHNALEKKREEDAALQRMNPLRVRQQRKMMLMAEVEDMDVTEMKSIA
LEPASVGPTTKAVAKAGVIACNHSEYIERLWKLYAENIAFDVAKATTKEI
TEAYVTTGKTLESKNLPVKRGKCEIERNLFDLVEAIRKRRMRLEMKARAE
SDARLERVSAKGMKELEAEGTEREQVAEVKKNRCTFDEVTASCHRKGNEL
TTATENEKAAVKAEVAEKVKAAVAITTKRERVRQNVAEYRRVNTSARKIQ
AAYRKRVQESVFSQSNWDKVAVSRYRKLLELTAMTETEKATVKAKATEAF
KSATAVNTPRRLKGAETVIAVREGRNKQDAMTKLDTADVQEEQVGGRDLA
TTKTTDSTPKKKPGMKTKECISVPKMTAKTGTNNVEESKLRDPVKGQRMS
KSDQVSMSNKQDLASTVERVKDVSASDLAAYPAIAVKPAPGTIDAEDTEN
FGAGDVSQAKEKKSEKARPEGTAKRELRAAEEVRDKVDRARVTNDAAEAS
TTVEHAKISGVDRTSELSGAASTVQMDQNVENAENSRGISKTTAMERGIK
AAGVTQITPLLTVSAAEIIGKQQQQRGGKEVERANRVGAEAQKRSTLQAR
IGSSLRLPPSRKHIEKKPDEFQIFPLQKQAGVTLMYKQIEWNLTALMNTL
RGYWLASGVAPVLRGGVARAAEEFSMVCGFSASFGPLLLRKAVGGEQVYA
RYNMGYDHMPFQYVMTKFEKFFEKEIVKCDAAERFFRLARKDSHSEHVTR
ADLHPFILSIAQRHPDLTELSVQEISIYVDTVLATIFYDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041534EF-hand_13