prot_H-paniculata_contig1243.1525.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1243.1525.1
Unique Nameprot_H-paniculata_contig1243.1525.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length155
Homology
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BLAST of mRNA_H-paniculata_contig1243.1525.1 vs. uniprot
Match: D7FW89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW89_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.070e-25
Identity = 80/166 (48.19%), Postives = 105/166 (63.25%), Query Frame = 0 
Query:    1 MDLPPSALLGRLQAFLPEMEKANRTTERLFADGKLDVIDANLAVA-TDQQHEDEGGEATDNEDEAEEEVEDGIQGGRNWPDGAREEGASGDCRTVQLDFALGDFDNNPIAKMEEEKEEEDNLESGENGLAGLLGVSEKKST-------LPG----KEKGKPLIEEL 154
            M+LPPS+LLGRL+AFLPEMEKAN+ TE+L  +GKL+V+        +D+Q E  G E TD+E   + EVE+  +GG+   +GA    A+G  RTVQLDFALGDFD+ PIAKME+EKE        + G  G  GV E++         +PG    K+  +PLIEEL
Sbjct:    1 MNLPPSSLLGRLEAFLPEMEKANQKTEKLAQEGKLEVLXXXXXXXXSDKQTE--GAEGTDDE-AGDSEVEEEEEGGQ--VEGAAGVVAAG--RTVQLDFALGDFDDTPIAKMEQEKEAAREAGGVDAGATG--GVEEEEGVEEGGDVVVPGAAHPKKPSQPLIEEL 157
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BLAST of mRNA_H-paniculata_contig1243.1525.1 vs. uniprot
Match: A0A836CNZ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNZ4_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.970e-13
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0 
Query:    1 MDLPPSALLGRLQAFLPEMEKANRTTERLFADGKLDVIDANLAVATDQQHEDEGGEATDNEDEAEEEVEDGIQGGRNWPDGAREEGAS---GDCRTVQLDFALGDFDNNPIAKMEE 113
            M+LPPS+LLG+L+AFLP++ +ANR  ++   +G+ + IDA+LA+            A  N++E+E    +G          A  EGA    G  + VQL FALGDFD+ P+A+ EE
Sbjct:    1 MELPPSSLLGKLEAFLPKLAQANRDLQQQTLEGQAETIDAHLALDA----------ADGNDEESESSDGEGDVAVAGASARAINEGAGDMQGGGKVVQLSFALGDFDDTPVAQFEE 106
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1243.1525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW89_ECTSI3.070e-2548.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNZ4_9STRA8.970e-1339.66Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1243contigH-paniculata_contig1243:18425..19857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1243.1525.1mRNA_H-paniculata_contig1243.1525.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1243 17953..23860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1243.1525.1 ID=prot_H-paniculata_contig1243.1525.1|Name=mRNA_H-paniculata_contig1243.1525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MDLPPSALLGRLQAFLPEMEKANRTTERLFADGKLDVIDANLAVATDQQH
EDEGGEATDNEDEAEEEVEDGIQGGRNWPDGAREEGASGDCRTVQLDFAL
GDFDNNPIAKMEEEKEEEDNLESGENGLAGLLGVSEKKSTLPGKEKGKPL
IEEL*
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