prot_H-paniculata_contig1243.1524.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1243.1524.1
Unique Nameprot_H-paniculata_contig1243.1524.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1156
Homology
BLAST of mRNA_H-paniculata_contig1243.1524.1 vs. uniprot
Match: D7FW85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW85_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 3.790e-108
Identity = 288/730 (39.45%), Postives = 356/730 (48.77%), Query Frame = 0
Query:  206 GAPNPLDKMGTVVRTSLAGSLRLVGAAVRGVGEAVFQAGTVAEGLAGGTGMVAEDLVRVVQGALYMARDDMENFSNAAARKGQGDGYGSKTIDRRKN---EGDRTQTPAAVGVLKSLSPEKNMEKVVDD---QEAGVVKTAASLASAAVDAVRRFWQVVCSLTCLMAGAALREAAQLFRQREGGAPPVAPRLAFILVLALGSCVRRRRLRRSSQPSPPQVVETSPARETFDFSSPRRRLSV-------PPGLGLGFGLAPTLSPSGNDHSRNNXXXXXXXXXXXXXXXXXXLTSPSRSLSLGSPRPTHGTMPPRAVVSP-SRLPLQVVGSIAPLTDDIVGVDPSLPSPAQQARGNPLLLPRTSIAGPREEESGAVGLVEGGDVATADGEAATAAAAVGVGRRVTARWRPWRWWRMEGRVAPPLRRQNGDTRSYIRWLWLLLLWFAASVLEERERDRVAWLAWDDGFRKGQMSRVFNSSAELETAIWLNHLIGGLWGRGGTIELV--------GRRSGGRVDG----------GLSSYVSEWFAEGVLEALEEFKPTSVVAVELQDINLGTVAPQILGIQMLDPSSSASPGGGDGSYQGQHAENFVSFRVALELATRGLSVGVGVKLSSLKKALLPTGNIRLLEAYFRGSISVRLEVRDEFPFVGKALVAFDGAPEVRVRMEQWGLDALTLGSV----DEWVRIGLRQAMKPYVLPGLLEINAAEHLCPDC 899
            G P+P D++G+V  TSLAGSL+L+ AAV GVG+AVFQAG +AEGLAGGTG VAED VRVVQ  +  ARDDM   +N   R+GQG  +     D RKN    G   + P A   +   +PE        D    +  +V    S+  A        W+ V  L  L   A +R+AA LFR + G  PP APR+A +++L +    R                     RE    S  RR L         PP   + F LA +L                               SPSRSL     R   GT P RA  SP +R   +VV    P  D   GVDPSLPSPAQ                                                                                                    ERERDR AWLAWD+G+R+GQ SR  + +AE ET  WLNH++   WG  GT  +V        G   G  V G          GLSS+V+E   EG LE LEE KPTSVV VEL D+ LG+ APQILGI MLDP+SSASPG GDG     H    +SFRV LE+A   L VGV VK+SSL+KALLPTG +RLLE +FRGS+SVR E+R EFPFV  AL+AFD  P+V++++EQWGLDAL+LG+V    DEW R+ L+QA+ PYV+PG +E++AA  +CPDC
Sbjct:   97 GDPDPFDRIGSVALTSLAGSLKLLSAAVGGVGDAVFQAGVLAEGLAGGTGQVAEDTVRVVQRFVGWARDDMVKLNN---RRGQGGHH-----DVRKNVDAPGPGKRPPPATPPVGVRTPEPAPHAAEKDGFTPDPALVSDGLSVLEA--------WEGVRDLGRLAVEALVRQAAGLFRLKNGALPP-APRIAALILLTVFIYDRXXXXXXXXXXXXXXXXXXXSPREPQRSSVARRDLRERGDGNRGPPSTAVAFDLAASLH------------------------------SPSRSL-FSRLRQAAGTPPLRAPGSPWTRRTYEVV----PQPD---GVDPSLPSPAQ----------------------------------------------------------------------------------------------------ERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWG--GTKRVVPTGFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCN--HEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQIKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDC 667          
BLAST of mRNA_H-paniculata_contig1243.1524.1 vs. uniprot
Match: A0A6H5L2G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G9_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 2.790e-99
Identity = 252/579 (43.52%), Postives = 313/579 (54.06%), Query Frame = 0
Query:  355 WQVVCSLTCLMAGAALREAAQLFRQREGGAPPVAPRLAFILVLALGSCVRRRRLRRSSQPSPPQVVETSPARETFDFSSPRRRLSV-------PPGLGLGFGLAPTLSPSGNDHSRNNXXXXXXXXXXXXXXXXXXLTSPSRSLSLGSPRPTHGTMPPRAVVSP-SRLPLQVVGSIAPLTDDIVGVDPSLPSPAQQARGNPLLLPRTSIAGPREEESGAVGLVEGGDVATADGEAATAAAAVGVG-RRVTARWRPWRWWR-MEG--RVAPPLRRQNGDTRSYIRWLWLLLLWFAASVLEERERDRVAWLAWDDGFRKGQMSRVFNSSAELETAIWLNHLIGGLWGRGGTIELVGRR-------SGGR------VDG-----GLSSYVSEWFAEGVLEALEEFKPTSVVAVELQDINLGTVAPQILGIQMLDPSSSASPGGGDGSYQGQHAENFVSFRVALELATRGLSVGVGVKLSSLKKALLPTGNIRLLEAYFRGSISVRLEVRDEFPFVGKALVAFDGAPEVRVRMEQWGLDALTLGSV----DEWVRIGLRQAMKPYVLPGLLEINAAEHLCPDC 899
            W+ V  L  L   A +R+AA LFR++ G  PP APR+A +++LA+    R                     RE    S  RR L         PP   + F L  +L                               SPSRSL     R   GT P RA  SP +R   +VV    P  D   G+DPSLP+P+Q        L RT  A  R    G      GG+       +   AA+ G G  R T     W WWR + G  R   P RR  G +      LWL  LW  ASVLEERERDR AWLAWD+G+R+GQ SR  + +AE ET  WLNH++   WG  GT  +V R        +GGR      V G     G+SS+V+E   EG +E LEE KPTSVV VEL D+ LG+ APQILGI MLDP+SSASPG GDG     H    +SFRV LE+A   L VGV VK+SSL+KALLPTG +RLLE +FRGS+SVR E+R EFPFV   L+AFD  P+V+V++EQWGLDAL+LG+V    DEW R+ L+QA+ PYV+PG +E++AA  +CPDC
Sbjct:   70 WEGVRDLGRLAVEALVRQAASLFRRKNGALPP-APRIAALILLAIFIYDRX-----XXXXXXXXXXXXXXXREPQRSSVARRDLGERGDGNRGPPSTAVAFDLTASLH------------------------------SPSRSL-FSRLRQAAGTPPLRAPGSPWTRRTYEVV----PQPD---GIDPSLPTPSQARAA----LARTGQAR-RSLMPGLTRRRGGGEGEVERERSVPMAASSGRGVERGTTSSVGWGWWRRVRGWTRCREP-RRAGGGSGGRRYMLWLFALWLVASVLEERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWG--GTKRVVPRGFAGVNGIAGGRDVHGCVVTGMLAADGMSSFVAEHLTEGFVEVLEEMKPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCS--HEGECLSFRVDLEVAAPDLRVGVRVKVSSLEKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTVLIAFDDPPDVQVKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDC 594          
BLAST of mRNA_H-paniculata_contig1243.1524.1 vs. uniprot
Match: A0A6H5L3C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.260e-13
Identity = 79/227 (34.80%), Postives = 102/227 (44.93%), Query Frame = 0
Query:   38 PAAATVADGGLKEEVQKAKRHQPW--EEADDDAVFAAAVLGELHDTIRVVGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDSKPKTSASVHNRDQSSEAATTT-SHEHGGSSYDGRMLTVAPSGLASKTRRAREATEQSSPPPDPTEDKTTKGGDKGEIRKGAPNPLDKMGTVVRTSLAGSLRLVGAAVRGVGEAVFQAGTVAEGLAGGTGMVAEDL 261
            PA         K+E  + KR +    EE D+D VFAA VLG +HD +R  GD+                                   +V    K   S  N   S+ +A  T SH+ GG S  G                A+  T +SS           +GGD        P+P D++G+V  TSLAGSL+L+ AAV GVG+AVFQAG +AEGLAGGTG VA +L
Sbjct:    6 PAHGRARQEETKQEKSRRKRRRGAGKEELDEDVVFAAEVLGLVHDRVRDAGDLMRVIGDTAGGLFGGTFKLLSAPVNGLSSMLDAASREV----KADVSPANAQPSTLSADPTRSHDAGGGSAAGSSSASPDDSGEDTVPVAKGHTGRSS----------GQGGD--------PDPFDRIGSVALTSLAGSLKLLSAAVGGVGDAVFQAGVLAEGLAGGTGQVAGEL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1243.1524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW85_ECTSI3.790e-10839.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2G9_9PHAE2.790e-9943.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3C8_9PHAE2.260e-1334.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 641..1155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..623
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 387..403
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 624..640
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..386
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 37..41
NoneNo IPR availableTMHMMTMhelixcoord: 25..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1243contigH-paniculata_contig1243:9912..17310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1243.1524.1mRNA_H-paniculata_contig1243.1524.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1243 9371..17339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1243.1524.1 ID=prot_H-paniculata_contig1243.1524.1|Name=mRNA_H-paniculata_contig1243.1524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1156bp
MKPWTTSTIDCRLDVYMKYYVRERLVVVGVLVLAVFAPAAATVADGGLKE
EVQKAKRHQPWEEADDDAVFAAAVLGELHDTIRVVGDVFRIVGDTAGALT
GGSIKAVGAAVNGISSVLDAASSKVDSKPKTSASVHNRDQSSEAATTTSH
EHGGSSYDGRMLTVAPSGLASKTRRAREATEQSSPPPDPTEDKTTKGGDK
GEIRKGAPNPLDKMGTVVRTSLAGSLRLVGAAVRGVGEAVFQAGTVAEGL
AGGTGMVAEDLVRVVQGALYMARDDMENFSNAAARKGQGDGYGSKTIDRR
KNEGDRTQTPAAVGVLKSLSPEKNMEKVVDDQEAGVVKTAASLASAAVDA
VRRFWQVVCSLTCLMAGAALREAAQLFRQREGGAPPVAPRLAFILVLALG
SCVRRRRLRRSSQPSPPQVVETSPARETFDFSSPRRRLSVPPGLGLGFGL
APTLSPSGNDHSRNNPPPSVVPPTASATAAAAALTSPSRSLSLGSPRPTH
GTMPPRAVVSPSRLPLQVVGSIAPLTDDIVGVDPSLPSPAQQARGNPLLL
PRTSIAGPREEESGAVGLVEGGDVATADGEAATAAAAVGVGRRVTARWRP
WRWWRMEGRVAPPLRRQNGDTRSYIRWLWLLLLWFAASVLEERERDRVAW
LAWDDGFRKGQMSRVFNSSAELETAIWLNHLIGGLWGRGGTIELVGRRSG
GRVDGGLSSYVSEWFAEGVLEALEEFKPTSVVAVELQDINLGTVAPQILG
IQMLDPSSSASPGGGDGSYQGQHAENFVSFRVALELATRGLSVGVGVKLS
SLKKALLPTGNIRLLEAYFRGSISVRLEVRDEFPFVGKALVAFDGAPEVR
VRMEQWGLDALTLGSVDEWVRIGLRQAMKPYVLPGLLEINAAEHLCPDCA
PPSAKPVGGSNTEPTHGGSSTTIGSRFQLPSSAPTTLSNGDLPILSAPSD
TATPAPAGAEPLRRAPPAAAGAAKAVFSAVASASYFPKAEVDNIALEGKP
LRGTAQSSGGGDGRLRRNGNVDGTGKGKDKRGKGQVGDNERQWSAAGTRA
VAPGGGSDGGSAVSGADVCEASARNSARSIGEERVASRGCGKQEAERRTI
GRAAAMAEVYDDHSGMGGTLQWVKDRLADRIGGGSGDGVGGRRWRDGGEA
NKRDG*
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