prot_H-paniculata_contig7256.15229.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7256.15229.1
Unique Nameprot_H-paniculata_contig7256.15229.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length350
Homology
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BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: D8LLC2_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC2_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 2.250e-46
Identity = 83/136 (61.03%), Postives = 107/136 (78.68%), Query Frame = 0 
Query:   77 KREPSSLPVVELVDFEFIASGAFCDVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIIDVYGICRIK---GYEN-DEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRSRKMKMVPF 208
            +RE +SLPVVEL   +FIA GAFC V++CKYRG+ VVAKRVR DLP  ++R AL NLW E++CL+ L+HPN+I+ YG+CR++   GY++ +E  VC+LLEQLA GTVGHLF T   +EKNL   ++RSRKMKMVPF
Sbjct:  124 EREIASLPVVELGSMKFIAHGAFCAVFACKYRGFSVVAKRVREDLPLPERRKALENLWQEYDCLQPLQHPNVIEAYGMCRVRCREGYDDWNERDVCLLLEQLAFGTVGHLFGTTYSVEKNLKTAMARSRKMKMVPF 259
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BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JQY0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQY0_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 8.580e-42
Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = 0 
Query:   93 FIASGAFCDVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIIDVYGICRIKGYEN----DEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRSRKMKMVPF 208
            FI +GAFC VY+CKYRGW VVAKRVR DLP +++RAALANLW E++CLR L HPNI+DVYG+CR++  E+    +E  VC+LLE+LA GTVGHLF+T   ++KNL  T++R+RKMKMVPF
Sbjct:    7 FIDTGAFCAVYACKYRGWSVVAKRVRQDLPLSERRAALANLWTEYDCLRSLSHPNIVDVYGMCRVRCREDYDDWNERDVCLLLEKLAFGTVGHLFETIVPVDKNLKTTMARARKMKMVPF 126
[Close]
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A8D2CTS1_SCIVU (Mitogen-activated protein kinase kinase kinase 21 n=1 Tax=Sciurus vulgaris TaxID=55149 RepID=A0A8D2CTS1_SCIVU)

HSP 1 Score: 55.8 bits (133), Expect = 7.960e-5
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 0 
Query:   89 VDFEF------IASGAFCDVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIIDVYGICRIKGYENDEFSVCILLE 172
            VDFE+      I +G F  VY   ++G EV  K  R D P  D  AA  ++W E     +LRHPNI+++ G+C  + +      +C++LE
Sbjct:  123 VDFEWLELKELIGAGGFGQVYRATWQGQEVAVKAARRD-PEQDAAAAAESVWREARLFAMLRHPNILELRGVCLRQPH------LCLVLE 205
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLC2_ECTSI2.250e-4661.03Serine/threonine-protein kinase CTR1 n=1 Tax=Ectoc... [more]
A0A6H5JQY0_9PHAE8.580e-4264.17Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A8D2CTS1_SCIVU7.960e-535.56Mitogen-activated protein kinase kinase kinase 21 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..305
NoneNo IPR availableGENE3D3.30.200.20coord: 81..172
e-value: 4.2E-12
score: 48.0
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainPFAMPF07714Pkinase_Tyrcoord: 93..186
e-value: 1.3E-5
score: 24.7
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 91..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7256contigH-paniculata_contig7256:2181..11198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7256.15229.1mRNA_H-paniculata_contig7256.15229.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7256 95..11519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7256.15229.1 ID=prot_H-paniculata_contig7256.15229.1|Name=mRNA_H-paniculata_contig7256.15229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MGAGRSKHPDWYPGEPAADALATCSSCQTAADKHRAEGMAQRPRVSGSES
TLPPSDRSEVSGLKQEHAPSGSNDKFKREPSSLPVVELVDFEFIASGAFC
DVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIID
VYGICRIKGYENDEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRS
RKMKMVPFHAGDQVVNINGHGNVCLSPFIAREVQVWVGSGTVESYPNLAI
LNELSKEYDVQRTMIEGIKGAAEKAQIEHLLTSQCDRLKKEKTEAEAEAL
SVATKRTVDMCQLCSKPSYSTRFCRSRQAAKGKKRFSGRCMGCGKENTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR011009Kinase-like_dom_sf