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Homology
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: D8LLC2_ECTSI (Serine/threonine-protein kinase CTR1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC2_ECTSI) HSP 1 Score: 171 bits (434), Expect = 9.930e-43 Identity = 83/136 (61.03%), Postives = 107/136 (78.68%), Query Frame = 1
Query: 550 KREPSSLPVVELVDFEFIASGAFCDVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIIDVYGICRIK---GYEN-DEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRSRKMKMVPF 945
+RE +SLPVVEL +FIA GAFC V++CKYRG+ VVAKRVR DLP ++R AL NLW E++CL+ L+HPN+I+ YG+CR++ GY++ +E VC+LLEQLA GTVGHLF T +EKNL ++RSRKMKMVPF
Sbjct: 124 EREIASLPVVELGSMKFIAHGAFCAVFACKYRGFSVVAKRVREDLPLPERRKALENLWQEYDCLQPLQHPNVIEAYGMCRVRCREGYDDWNERDVCLLLEQLAFGTVGHLFGTTYSVEKNLKTAMARSRKMKMVPF 259
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JQY0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQY0_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.750e-38 Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = 1
Query: 598 FIASGAFCDVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIIDVYGICRIKGYEN----DEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRSRKMKMVPF 945
FI +GAFC VY+CKYRGW VVAKRVR DLP +++RAALANLW E++CLR L HPNI+DVYG+CR++ E+ +E VC+LLE+LA GTVGHLF+T ++KNL T++R+RKMKMVPF
Sbjct: 7 FIDTGAFCAVYACKYRGWSVVAKRVRQDLPLSERRAALANLWTEYDCLRSLSHPNIVDVYGMCRVRCREDYDDWNERDVCLLLEKLAFGTVGHLFETIVPVDKNLKTTMARARKMKMVPF 126
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JYL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL4_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.870e-13 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 2455 GDRERSTVLRVQIFIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKISFGKYVEALHK 2748
G +E V V F+APE +I ++EDN+GAI + N SS RT+HIDV +H +R + +G + V +V T E HAD+LT+AL ++S + L K
Sbjct: 108 GVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMK 205
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 4.640e-12 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 2494 FIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKISF 2721
F+ P + I ++EDNEGAI +A N SS R++HIDV HH +R++ E GV+ V +V + E HADILT+AL + F
Sbjct: 171 FLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLF 246
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5J8M4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M4_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 8.330e-12 Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 2494 FIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKISF 2721
F+ P ++ I ++EDNEGAI +A N SS R++HIDV HH +R++ E GV+ + +V + + HADILT+AL + F
Sbjct: 153 FLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPRSIF 228
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.910e-11 Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 2494 FIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKISFG---------KYVEALHKCCG 2757
F+ P ++ I ++EDNEGAI +A N SS R++HIDV HH +R++ E GV+ + +V + + HADILT+AL + G K V+ L K CG
Sbjct: 1206 FLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPRSKSGPIGAMAALNKLVKCLRKGCG 1302
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.520e-11 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 2455 GDRERSTVLRVQIFIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKIS 2718
G +E V V F+APE +I ++EDN+GAI + N SS RT+HIDV +H +R + +G + V +V T E HAD+LT+AL ++S
Sbjct: 754 GVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVS 841
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.520e-11 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 2455 GDRERSTVLRVQIFIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKIS 2718
G +E V V F+APE +I ++EDN+GAI + N SS RT+HIDV +H +R + +G + V +V T E HAD+LT+AL ++S
Sbjct: 755 GVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVS 842
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 3.030e-11 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 2455 GDRERSTVLRVQIFIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKIS 2718
G +E V V F+APE +I ++EDN+GAI + N SS RT+HIDV +H +R + +G + V +V T E HAD+LT+AL ++S
Sbjct: 1146 GVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVS 1233
BLAST of mRNA_H-paniculata_contig7256.15229.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 3.290e-11 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 2455 GDRERSTVLRVQIFIAPELDDYAITIMEDNEGAIKMANNKHSSRRTRHIDVNHHLVRDMVEAGVVRVVYVGTGEHHADILTRALEKIS 2718
G +E V V F+APE +I ++EDN+GAI + N SS RT+HIDV +H +R + +G + V +V T E HAD+LT+AL ++S
Sbjct: 1525 GVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVS 1612
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 175.3 |
| Seed ortholog evalue | 5.2e-41 |
| Seed eggNOG ortholog | 2880.D8LLC2 |
| KEGG ko | ko:K14304 |
| KEGG TC | 1.I.1 |
| KEGG Pathway | ko03013,map03013 |
| KEGG Module | M00427 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785 |
| EggNOG free text desc. | protein kinase activity |
| EggNOG OGs | COG0515@1,KOG0192@2759 |
| COG Functional cat. | KLT |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03036 |
| Exons | 5 |
| Model size | 3445 |
| Cds size | 1050 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7256.15229.1 >prot_H-paniculata_contig7256.15229.1 ID=prot_H-paniculata_contig7256.15229.1|Name=mRNA_H-paniculata_contig7256.15229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MGAGRSKHPDWYPGEPAADALATCSSCQTAADKHRAEGMAQRPRVSGSES
TLPPSDRSEVSGLKQEHAPSGSNDKFKREPSSLPVVELVDFEFIASGAFC
DVYSCKYRGWEVVAKRVRADLPAADKRAALANLWNEHECLRVLRHPNIID
VYGICRIKGYENDEFSVCILLEQLALGTVGHLFDTNRHLEKNLVNTISRS
RKMKMVPFHAGDQVVNINGHGNVCLSPFIAREVQVWVGSGTVESYPNLAI
LNELSKEYDVQRTMIEGIKGAAEKAQIEHLLTSQCDRLKKEKTEAEAEAL
SVATKRTVDMCQLCSKPSYSTRFCRSRQAAKGKKRFSGRCMGCGKENTA* back to topmRNA from alignment at H-paniculata_contig7256:95..11519- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7256.15229.1 ID=mRNA_H-paniculata_contig7256.15229.1|Name=mRNA_H-paniculata_contig7256.15229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11425bp|location=Sequence derived from alignment at H-paniculata_contig7256:95..11519- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAATTTTCAAGGCAGGCCAATCGATGCCCCTCGAAGAAGATAAGTCAA
CCTGCACTTTAAGAAATATTGCATTCCTACGGCAGCAGTCCCAGCTGCGA
TAAGTGGCTACTGTGGTGTAGCAGTAGGAACGGCATCATAGCGCGACTCC
ACTGGGTTGCACCACTAAAAATTCAAGAAAGGAGGGACTATCTGTTGTGT
CATCGGACCGCCAGACAGAGCTTGACCTTTTTACTCCCAGGGGCGCGAAA
AATATCTTCGCCTGCCTGCTTCTATATCCCTAACCAAAATTGCAGCAACA
ACGGTCAAAATCCTTGATCTTATGGGGGCGGGGAGATCGAAGCACCCGGA
CTGGTACCCAGGAGAACCTGCTGCAGACGCTCTTGCAACATGCTCATCAT
GCCAAACAGCGGCGGACAAACATCGTGCAGAGGGTATGGCGCAACGACCT
CGTGTAAGCGGTAGCGAGTCTACGCTGCCGCCCAGCGATAGGAGTGAAGT
TAGCGGCTTGAAGCAAGAACATGCCCCTAGTGGTAGCAATGACAAGTTCA
AGCGAGAGCCATCGAGTCTCCCCGTCGTGGAGCTCGTGGACTTCGAGGTA
GGGGACAGGAGGAGCACCGAACGATTAGATGCAATGTGGCATACTCTCTG
GGATAAGCTCTTGATAAAGTAATCTAATTACAAAGAAGATAAGCTGCCGT
GTTTTCTTCATGTTTCTGATACGTACGTCTGTTACTGTTTTTAAGCTGCT
TCTTCTATCTGATGTTGGTGGGACCACGTGTCATATCTACATCGGTAAAA
TGCGTGATTTCGCTCCAGGTGCTCGAACGGTTTGCTTCACTCTGCCGGAC
ACCTTCTCGAAAGCGATGTATGCTGTTGTTTTGGTGAAGTATACCCATTG
CTTGTTTGGATTGAAAATTTCCTTCATGGTCATATGTTTATTTCCATGGC
GGGTATGTGGTTGTTGTAGTTCTTCCGTCATGTCTTTCTCAGTCACAACA
TTTCACAAAGAGCGTTCAGGATCCATGCGCTGGACTCCCCACCTGTCCAA
AACTATCTCCGCTCGAACTTTCGACAAAAAGATACAGGGGTCTTTACGTC
ATCGAACATCACACATTTTATCACAGCTTTTCTGTAAGTTCAAGTGAGGT
GAGGTTGGGGTACACAAAAACTAACATAAAATGTGTGACGTCCGATGACA
TAAAGAACACTGAAAAATACCGGTCAGTCGTACTACGTCATTCTGGTTGC
ATGTACGTGTGTACGTTTTCAATTCAGCTGCAACTACAAAATTGTACGTG
GTGGATCTGTCTGTCTGGCTACAGGTAGATCACGCTTTCAGATTTCTTTT
GCTCGAAGTTCCATTTTGTTGTGTTGGTCCGTTTCAGGGGTCTGTTGCTA
ATTGTGTTGCATACGTACCTTGTTGTGCCGTGTGCGCACGTTGTTTAAGC
CCGATTTGTAATCAAGTACAGGTTGATATCTGCAACCAAGAGAGAGATTT
CAACCATGAGGTCCGAAACAGAATTCGTACGAACTTGTCCTCCAAAATGA
GCAAGGGTATTTTTTTTGGTATTTTCATTCAGTTTTTTTTTTCTTTTCTT
TTTTGTAAATCATGTATAAAACGAGTACCATGGAGGAAAGCAATATTCTG
AAAGCACCACGATAAGTATACATTTCGTGGGAACAATATCGCGGCGTTTT
TTTTTTCCGAAGTCCAAGTGGCCATCGTGTTGTTGCCGAAATGACCGAAT
ACAAGAATAAAGCTACGCCCCGTGAGAAAAACATGTCGGCGTTTTTTTTC
GAAATCCAAGTAGCCATCGTTTTCCTGAAATATCGACTACAAACGGTGTT
TGGTATTCGGTATTTCGAGATCGAAACAATTGCCACTTGGACTTTGAAAA
GAAGCGGCCGATGTTCTGTTCCCGTAGAGTGTACTTTTAGAATATTGCTT
TCCTCGATGGTACCCGTTTTACAGACGGTCTAAAAACGGAATATATATAT
ATATAAATACTAGAACACTGAGAATACCCCTGAAAACTGAAAATACCAGG
CGATACTCGGGATTGGGGATCAATTTTCTTGTTGGGATTGAATATTCGTT
GAATTTGAATGGTATACTTCGAAACGGGTGCTAGAGACTGCCACTTTCGG
GGGAGAATCCGTGTCCATCTCACTGCTACTTCCTTTGCGCAATGAATTTG
GAAACCTTTTCATACCTCGATTCGAACCGATGGTGCCTTTCGCCAGCACC
ATTTTTGAAGTATTTCATTCAAATTCAAATGGAACTTCAATCCCAACAAG
AACGTTGATCTCCAATCTCGAGAATCGCCTGTAAAGTGAGGTTCACCTTT
AAATGGGGTTTAACAACCTCAAAACCTTGCTTTCCCCAACCTGAAGTCAT
GACCAGTGGCCTTTATTTGGAGGACCCAGTGCCCCTCGATCGCTTTGTAA
CTTCTTCAGGGGTTTAGCCTCATTTTAGAAGACATTGCTAACACACGTTG
TGAAGAGGGTACGTTGCGAAGACCTTGTTGCGGATATATTACACCGTCAC
CACATTGCGTAAGGTTGAAAACAAGCTTAGAACTCGACAGAAAAATATTG
TAATACGTCGCCTCCAGTCCGTTGGGTTCCGGTTACCCCTGAACTGAAGT
CTTCCAAAGAAAGACTTGAAGAAAGGGGGGAGTACTGTGGTGGCCACCTT
TATGTAAACACCTTACAAGGGCAAATACTTACCCAACCTCTGTCGAGGAT
AGTTACCCTTATTTTATACAATTGTTCCTGATTCTTCTGTTGGTGATCCC
TTGCGATGCATGATGAGGATGTTATGTCTTTACGACGCCAGAACGTGCAT
TTGATTTTGGAAGAAGGGCTGTTACTCCTCCAGGAGCTGCAGGTCCTTGG
CGGTGAGGTGTTAGTGATTTGCGTGCCTGATATTTCCTGCCTTCCCTTGT
GTCCCCCCCCCCCCCCACAAGCACAGTTCATTGCGAGCGGAGCGTTTTGC
GATGTATACTCGTGCAAGTACCGCGGTTGGGAGGTGGTGGCGAAGAGGGT
GCGGGCCGACTTGCCGGCAGCGGACAAACGCGCCGCGCTGGCAAACCTAT
GGAACGAGCACGAATGCCTTCGGGTGCTGCGGCATCCCAACATTATCGAC
GTGTACGGCATTTGGTAAGGGACGGAGTAAATTATTATCTCTCTTCCCTC
TTCCCCCGGTTATGTGATATACTGTGTTCATTCATGGTTACGCGATGTTC
AAATTTTTTCGCGAATTTTCGGAGGTCATTTTACCCTATTCTCTGTCGAA
AAAAATGGTTGACAGGTTAGAGTCCAATGCGATGATTCGACAGGTCCTTG
TTTCATGATTCAGGCGACCCGAGCAGAACCAACACTGGAACTGCTGCTAC
CCCTTAGCCTAACCCCCTCCCCCCCAGGCCTGACATGCTTTGGCAGAGTT
CAAATTGGCGCCGTTGGCACCGTTTGTGAGCAGAACATACCTTTGCGTCC
ACGTTATGGGCTACTTTAGGGCATGACATCATCTGGCATCATAATATCCT
CAGTTTGTATATCTCAACTATTTTATCGGCAAAATTGGTGATTCTCTGCT
GAAAAAGCATTAAACCGATTCATCCATCGGCACGGACTTTTTTTAATCGG
CGCTCTTCCTTGCAGCAGCCCAGGCGAGCCTACCGGTGACCGTACAGCGA
GTAACTGCGTGCTGCTATGAGCAGGGTCGGGGTTTTTTTAGCCGCTGCAT
GCAGTCTAACTCGTCGAAACGAGCGCTTTAAAATGTGTTGCGTGACAAAC
AGTATGGATTTCAGCTTCGTTCTGCAAAAAAATTTCGTTCTCCATTTCGT
CAATAATTATGTATGAAGTGTATTTTTTTGCGAGTTTGCGTGTGCCTCAC
GAACCTAGTCAAAAACCTGTAAACCCCACCTAACTCGAATCCTGCAGCCG
TGTCGATGGAGGGGTTGGGTAGAGTACATGTAAATTGTCTGCCCATACCT
CACAAGTAGTAACAAGTGAACGCATACCTTGCACATAATTAGTCCTTATG
AGCCTTACACTTCATTAATCTGTTTTCTGGGATATGCTTTTCGGCCATGT
TTTTCACGTAAATAGGCGTCAATTATTGCCACACATTCGCATGATATGCA
CTCGTGACTGTTGTTCCAACCCGTTGCCACAATTCATCCACTCTGACTCT
TGTACTCTGACGTGTGTGTACTGTGTGTACTGTGTGTACTGTGTGGACTT
TCCGCTGCAAATTGAATGTTTATGGCCAAGCTCTGATCGAGGCCCTGTCC
AGAAAAACTTCGAATGAAAAGTGAGGGTAATAGATGAAATTGACCGGACG
CACTGACACATCATGTTCGAGTTGCATAGGTGACAAACAAATTAACACAT
ACATCAGAGAGTTGCCACGACCATAGCCCAAACCACTGTAATTAGTCGAA
CGTGTTGTGTGATTGCTTGGTAAGGGGGAGGAACGACAAAAGTTTTGGGA
AATACCAACAAGGGCGACTACTGGCTGTAAAGGCGAGCGGATGATCTCTT
GTCCTGTCTGAGAAAAGCGTCAGTTGATCTGTGGGCATTTTGCTGTCCGC
CGAAAGAGCAACAGCGCCTGAATCCCGCTTATGTAACCCCCCCCGAAGGA
TTTAATACTCATACCCCTGGACCCGATCTGATCCCTATCGAATCCCCATC
TCTGAGATGGAGAAAAAAGGGGCATATGGCAGTCAGGCCATTTTACCCCT
TTGTCCAGTTCGGTAGTTGACAGGTCGTTGTTTTTATGGTTCACGCTTTG
TTGTACACCACACTATGGATAATATTTGAAAGAAAATAACCATACAAGAT
GCGGCCCGATATGGATAAAAACATGACGTCGAAGATTACCCGAAGCATTC
ATCCTTCCTTTTGCTGCTGCTTCTGCTTCTGCTGCTTCTGCTTCTGCTTC
TGCTGCTGCTGCTGCCGTTGGTTTGAGCCCCGATCCCCCCGCATCCACTT
CTCACCCTATAAGCACGACTGCCGCACTTGATCTATCCTCGCCGCCTTCG
TTCCTCATTTATCGCTCCTCCTGTCTTTATTGGCGTGTTTTTTTCTGGCG
TCTTTTTCGGCTCACGGCTGGGAAAACAAAAATAAAACCGAACGACGACG
AAAAAAGTCGGATAAAGGGTTACGAGAACGATGAGTTCAGCGTGTGCATT
TTGCTGGAGCAGCTGGCGTTGGGCACGGTCGGGCACTTGTTCGACACAAA
TCGGCACCTGGAAAAGAACCTTGTGAACACCATTAGCCGGTCGCGCAAGA
TGAAGATGGTGCCGTTCCACGCGTGAGTCTCTTGTTTTCTGTTGGTTATT
CTGTGCCATAACCGTCTCCAATACAGAAAAAATGCTATAGTTCTACCTGT
TTTTGTGATTGATCTCGAACCCTTGACGGAATTTGGCGAAATCCATTGGG
GTCGCGCGCGGCATAAAAATGGAATGGCCAAAAAAACAGATAATTTTGTG
CCCCTTTTCGTGTTTTCCCGATGGGAAAAAGTGAAAATTAGAAAAAAAAA
AATCGATGAAAATGGTCAAAATTAGCCCAACCTTGAACAGCCATTAATCC
TGGTACAAAAATTGGAACGCAGTTCGGAGTAGGGCTTATGAGTCTGTCAG
ATTTCAGCTTTCCAACGATTTCATTCGAACCGCAGCCTCTGAACAGTCTT
GGATCTGGAGATATAATCTTCTGAATACAATCGACTTTATTTGTGGCAAA
GAGGAAGATGGATGTATAATTTGATCTGAATTTGATAAAGCAATCCTTGA
ATTTACGTACCTTGTTGTCCTTGCCAACGAAGGGAAAAAAAAAATGCTCT
TCCCTCCTACCATATAAACAACTGGAGTTCGAAGTCAGTTATATCTAGAT
CTACTATAATTATTGCGGGAAGTAGGTTGACTCGTGAAAGAGGCGTGCAG
TGGGTAAATCGAACATTTTATTTCCCGCCATGCGTTCTTCACGTGAAAAG
GAGCCATTTCATGTTTACGCATAGTACACACGTGAGTGATAACGGTGATA
CTCCCTCCGTTAGTGAAAGTCATATCCCGTCTCGTGCTGGGTCGAAGAGT
TGCGAGAAGTCCTCGTACTTGGTCCTCCCTGTCCCCTTCATTTCTAGCAC
ATTTTAGAGCTCATAAAAAAGAAAAACTGATTTGACCGCGTCGATCTACT
ACTGTATGTGCTGTATGTACGCAGTAGCAAGAGAGAAGAGAGACACTGGG
AACCTGAGAACTAACTGAGCTGTTGTAGCTCTCAGAACCCTTGATCGCCG
ATGGAGGTCCTACTGTGTCCGCGTTGTGTGGCTCTCTCATATGTGCAGCA
ATCCGCTTGTTATTCCCACGAGTTTGGGGTTGGTCAAGTGACGGTCGCAT
GTCCCAAACTTGTAGACACGTCTGAGGGGGGGGGAGGGTATAGCAAAAAG
TGGCTTGCCACTTTTTAATCCTCGTGTTTTTTCCTCGATAGTTTTACAAG
AGCGAAAATTCACAATTTTGACACTTCCTTCCTCATCCTGTTTTCCATTT
CGTTTTCTATGCTTGTGCAAAAGGCATCGTCTTTGACACAAAAAATCGTG
TATGCCTCCAATTGCTCGGAGGTGTAACGCGGAGGAGCTATCTTGTGACG
TCGGGTCAGTTCCGCTTGCTTTTCACTCTGATATTCATGCTGTATTCCTT
ATGACATATTGAGCGGTCGTTTCCGCCCAACGGGACACGCCGCTGTTCAC
CCTGTTTAGGGGGAGGTCTCCAATCTGTCCCCTTCTCCCCTTCCCCCGCG
TTTCACTGTATATTGACTTTTCCCGCCGCCGGATGCCATAAAACACCAAA
AAAGGCATCCCACAGTCCCAACGCGAAAGAGGGCAGAACGGGGGGGTACG
AAGGGGGTGGGTCTTGGTTTCGCAGTACGGGGGTGTATATCGCAGCGGAA
TATGCACGGAAAACACAGGGTGAATCTAATTATGCACGTTTGTCCATCCA
ACGGCCAACAAAAGAATGCGTCGTTTTCTGTGCACTAGAGTACTTGAAAG
GGGGTAGCAACATCCCTGCAGGAATCCTTCGGCGATTGACGGGGATTGAT
TGAACGTGCAGGTTTGAGGCTTGGTCATTTTATCCTTGGGCCTACTGTGT
CCTTTTGGGCGACGTCCTTTTGGATTAGCTGTTTTTTGTGAGCGTAACAC
AGTGGCTGTGGCCAATGCTTTCAACAAAGATATAGGCACAGATGGGCGAT
AGCTCTTTCTGTATTTTCTGCCTGCACTGTCTACGGATGTCGAAACAGCG
CCGTGAGGATTATAGTGTGCTCGATTTCATGTCCTGTCGTGCGGATTTTT
GCGGTACAGACACCCTGTACATCTGTCACTCATGGTGTGGTTTGTTGGAG
TCATGTGTGTAGTATATACAGACATCCTTGTGGCTTGTGACACAGTAGTA
CAGACACAGTTGTTTACTTGTTCGTATATTATGATGCGCAGATGAGAGTG
AGACAAAGGAGGTCGGTGCACCTTCCATGTTGTTGACAATATCTTGCTCT
CGAAATTCCCAAATATTCCGCGGGATGTGCCGACTCCTGAAAATTCAATC
GGTAACAAACGGCGGAACATTCCGACTCCAGAACATTCAAAACAATATCC
CGTGCAAACCTCCCGACGGTTGATACTCTGCGTTATCGTATCGCATCCTC
ATTCGTCAATACTCCCCCTCGATATCGAAACCCCGCATCCAATCAACGGC
CAAAATCGATGACTCCTATTTTGATATCGCACGAGATGTCAATCCTTTCG
CATAAAAAAATGCACTCCCTCTCAATGTTACAACGTCTATACCCAACGGG
ATCACGAACATTTATCCACCATAACTTCGTTGCTCAGCCCCAAACTATCA
ACGACGACATTTGTTTCACAGTGCGGTAAAAAAATCATCACATGAGTCCA
TTTCTCAGTATCTGAAACTTTACTCTGCTCAGTCCTTTCGTTAGAATGTC
CGCAAGTTGGTCGCCGGTCTGGACGTATTTCAAAGCCAATATTCCTTCCT
GAACTCACTCTCCAATTCCGTGCCAGCGCACTCCGATATGCTTTGTCCTG
CAGTGTGCGCCAGGTCCCTTACTGAGATTGATAGCTGAATTGTTGTCCTC
AATTGAGGTCGTGCTCCCTCTGCATCCGAAATCTATCGATCCTAGTAAAT
CCATAGGATATACAGTCTCCTTTCCTGCTTCTCCTGAGCAACGCACTCTG
CCTCTATACTGGACCATGTGACTAACTGTTGCTTTCTAGAGCACCAACTT
ATCGCACCATCGTTCAGCTTGAATACGTATCCTGTTGAGGACTTTCCGTC
TTCGACATTTTCAGCCCAATCGGCATCAACGAATCCTTCCAGACCGTGAC
CATTACTCTTACCGCCGAACGTAATACCGAGGTCAGGCACAGTACTGAGA
TAACGAAAAATGCCCTTGCATGTGCTGAATTCCTCATACGACGTGCTGCT
TGGTGTACCGCGTATGCTGTATTAGGTCTAGTTCCTGTCGAGGCGTACAT
GAGTGATCCTACCATGCCTCTGTATTCAGAGGAATTGCTACTTCTCTCAC
TGTTGCTTTCTTGTACTCCTGCGTCTATATCCGACAGTACAGCCCCAAGT
GGTTTTGGTTCGGGGGGCTTGTCGGCCGACCCGGGTGCCGAAATCTTCAC
TTTTCCCTCTACAGGGGTGGGCACGCCTCGACACTCGTCAAAACCGTGTC
TTTTCAGTACCTCGCGGATGTAGCCGCCTTGGGATATCGATATGGTACCA
TTGGGGCGGTTACGTCGTACTTGTATTCCCAACACGCGCGAGAGGAAGCC
TAAGTCTTTCATCCTGAAATGCCGGCTTATGTTGTGCTTGAACTCGTTTA
CTTTTTCACGACGCCCAGCGGTGACCAGGTCGTCAACATAAACGGTCATG
GGAATGTCTGTCTATCCCCCTTCATCGCGAGAGAAGTACAAGTATGGGTC
GGTAGTGGAACGGTCGAGTCCTATCCCAACCTGGCGATACTGAACGAGCT
GTCCAAGGAGTACGATGTTCAGCGGACGATGATCGAGGGCATTAAAGGCG
CAGCAGAGAAAGCTCAGATCGAGCACCTCCTCACCAGCCAGTGCGACCGT
CTGAAGAAAGAAAAGACCGAGGCCGAAGCGGAGGCTCTGTCGGTCGCCAC
AAAACGTACAGTTGACATGTGCCAGCTGTGCAGCAAGCCGAGTTACTCCA
CCCGATTTTGCAGAAGTCGTCAGGCAGCCAAGGGCAAGAAAAGGTTCAGT
GGGCGCTGCATGGGCTGCGGGAAAGAAAACACCGCGTAGAAGACTGCTGG
GGAGCGAGGGGCAGAGAACAGAAGATGGGCGACGGCAAGACCAAGCGGAC
GCAGTGCTGCGTCTGCGGAGTACGGAGCACATCGCGCACAAGTGTCCACA
CCGCAACGGTGCGGACAACGGAACAACGACAACAGGTAGACCCAGCGCAC
TGGCAGATGTAGTCCGCGGGTACACCATCGCCGCTGTTGCGGAGGCCGTC
GAAAGTTCCGAAAAGTGGGCTTGAGACTCAGGAGCAACCGAGCACATGTC
GTCCGACTTTACGGCGTTCGAAAAGTACACGCCGGCGCCGATTGGCACCA
GAGATAGCTGACGGGATATTGCTGCTGGTGGCGGGAGTCGGGAAGCTGGA
GCTCCTTGTGAAACAGCCCTGGGGCAACCCCATTGCAACGGTGCTGCAGA
TTGTCGCGCACATACCTAAACTATGACGCAACCTCATCTCTATGCGCGAG
GCACCGAAGACTACCAGAACGCGTTGGATCCTCAACGATGAGAAAACGAG
GTTGGACCTCGAAAAGGAGGAGAGCCTCGTCTTCACGGCGTCTGCAGCAT
CGGGGTTGTACGAGATAGATGTCGTGCGAAGTACTGCAGGAAACGCAAAA
GCTCTGGCCGAACGGAGCCCGACGACACGTGACGTCATGGAGATGCATCG
ACTGCTCGCACACACGAATGAGGCGGTCACAAAAGATACGGCGAAGAAAG
TAGGTGTTGCACTGACAAGGCGAGTGGGAACGCAGTGGGGAATGTTCCAA
GGCAAACGCATGCCCGCACGCCATGCCGAAGAAGATGGACGAGAGGGTGA
CGCGGGCGGCACAACGACTCTTCATCGATCTGGGTGGGCCGATGCACGTG
ACGAGCTGGGGAGACAGCTCGTATGTGATGATCGTCCTCCACGACTTCAC
GCGATTCCACGCGAGGCCACGAAGTTCATCAAGAAAAAGAGCGATTCCAC
CGCAGCACTCCTGAGCTACATCGCCAACTACATCACTCCCAAAGAATGCA
ACATCGGCGCCATCCGCACCGACAACGGCGGAGAATTCAAATGGCAGCGG
CAGAGACGTCGGAGGCGGAATACGTCGCACTGGCGGAGATCGCGAACGAA
GTACTGTTCTTCGGGTCCAGATATTCATCGCGCCGGAACTGGACGACTAC
GCCATCACCATCATGGAGGACAACGAAGGCGCAATCAAGATGGCCAACAA
TAAACACAGTAGTAGGAGGACGCGACACATTGACGTGAATCACCACCTCG
TTCGGGATATGGTCGAGGCTGGAGTCGTCCGCGTAGTCTATGTGGGAACG
GGGGAACATCACGCGGATATTTTAACTAGGGCGTTGGAGAAGATCTCGTT
TGGAAAGTACGTCGAAGCTCTTCATAAATGTTGTGGCGGTAGATCGAGAT
TCATTTTGACCCGTAGTGGTTACGCGTCGTCTTGCAAGGAATGTTTTGAG
TGAAGCAAAATGTAATACGAGCGCGTATTTTGGAAGTTTGTGGAGTAATG
ACTAACATATTCGCTGCGTAGAGCAAGAGAGGGTGTTGGAGTTATGTGCT
CTACTGGTCAGTTCAAGTCATGTGTCATTCTGGTTGTCGTGTATTCTGGT
ATGAAATGGGAACACTGCAGCCAATGCGTTCGAGAAGGAACGGTCCTGAT
TTTCTGGAGAACGTTCCCGGTTTCTAGATATAGCTTTCTGGGAGAGTAGG
AGCTAGGATATTCGAATTTTGGATCGATCTCACAGGAGAGGGACTGCCCC
CCCGCTAGCTCATTTCCATTTCCATCTTCCGTCCTGACCTACCTAGCCAA
CGGTCCACACCATGAGTTCAGCAGAGGAACCAAGAGAGTAGGATACCAGA
TAAGAGGGCAGAGGAGAAAATAATAGTAATAAACAAGAGAAGAAGAAAAA
TTACCTGAAAATCCAGGCTACGTCAACGACTTCATAGTCTTGGAGAAGCC
GTACCAGCGTACAACAGCGAAATATATTGATCCTGGTTTGTGCTTCGCGC
TTCTCACGTACATACGCAGAGGCAACACGGACCTACGCCCGAACGGGTAG
GGTAGCTCGTGAACTGAGCATGACT back to topCoding sequence (CDS) from alignment at H-paniculata_contig7256:95..11519- >mRNA_H-paniculata_contig7256.15229.1 ID=mRNA_H-paniculata_contig7256.15229.1|Name=mRNA_H-paniculata_contig7256.15229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig7256:95..11519- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGCGGGGAGATCGAAGCACCCGGACTGGTACCCAGGAGAACCTGC
TGCAGACGCTCTTGCAACATGCTCATCATGCCAAACAGCGGCGGACAAAC
ATCGTGCAGAGGGTATGGCGCAACGACCTCGTGTAAGCGGTAGCGAGTCT
ACGCTGCCGCCCAGCGATAGGAGTGAAGTTAGCGGCTTGAAGCAAGAACA
TGCCCCTAGTGGTAGCAATGACAAGTTCAAGCGAGAGCCATCGAGTCTCC
CCGTCGTGGAGCTCGTGGACTTCGAGATGGGGGCGGGGAGATCGAAGCAC
CCGGACTGGTACCCAGGAGAACCTGCTGCAGACGCTCTTGCAACATGCTC
ATCATGCCAAACAGCGGCGGACAAACATCGTGCAGAGGGTATGGCGCAAC
GACCTCGTGTAAGCGGTAGCGAGTCTACGCTGCCGCCCAGCGATAGGAGT
GAAGTTAGCGGCTTGAAGCAAGAACATGCCCCTAGTGGTAGCAATGACAA
GTTCAAGCGAGAGCCATCGAGTCTCCCCGTCGTGGAGCTCGTGGACTTCG
AGTTCATTGCGAGCGGAGCGTTTTGCGATGTATACTCGTGCAAGTACCGC
GGTTGGGAGGTGGTGGCGAAGAGGGTGCGGGCCGACTTGCCGGCAGCGGA
CAAACGCGCCGCGCTGGCAAACCTATGGAACGAGCACGAATGCCTTCGGG
TGCTGCGGCATCCCAACATTATCGACGTGTACGGCATTTGTTCATTGCGA
GCGGAGCGTTTTGCGATGTATACTCGTGCAAGTACCGCGGTTGGGAGGTG
GTGGCGAAGAGGGTGCGGGCCGACTTGCCGGCAGCGGACAAACGCGCCGC
GCTGGCAAACCTATGGAACGAGCACGAATGCCTTCGGGTGCTGCGGCATC
CCAACATTATCGACGTGTACGGCATTTGTCGGATAAAGGGTTACGAGAAC
GATGAGTTCAGCGTGTGCATTTTGCTGGAGCAGCTGGCGTTGGGCACGGT
CGGGCACTTGTTCGACACAAATCGGCACCTGGAAAAGAACCTTGTGAACA
CCATTAGCCGGTCGCGCAAGATGAAGATGGTGCCGTTCCACGCTCGGATA
AAGGGTTACGAGAACGATGAGTTCAGCGTGTGCATTTTGCTGGAGCAGCT
GGCGTTGGGCACGGTCGGGCACTTGTTCGACACAAATCGGCACCTGGAAA
AGAACCTTGTGAACACCATTAGCCGGTCGCGCAAGATGAAGATGGTGCCG
TTCCACGCCGGTGACCAGGTCGTCAACATAAACGGTCATGGGAATGTCTG
TCTATCCCCCTTCATCGCGAGAGAAGTACAAGTATGGGTCGGTAGTGGAA
CGGTCGAGTCCTATCCCAACCTGGCGATACTGAACGAGCTGTCCAAGGAG
TACGATGTTCAGCGGACGATGATCGAGGGCATTAAAGGCGCAGCAGAGAA
AGCTCAGATCGAGCACCTCCTCACCAGCCAGTGCGACCGTCTGAAGAAAG
AAAAGACCGAGGCCGAAGCGGAGGCTCTGTCGGTCGCCACAAAACGTACA
GTTGACATGTGCCAGCTGTGCAGCAAGCCGAGTTACTCCACCCGATTTTG
CAGAAGTCGTCAGGCAGCCAAGGGCAAGAAAAGGTTCAGTGGGCGCTGCA
TGGGCTGCGGGAAAGAAAACACCGCGTAGCGGTGACCAGGTCGTCAACAT
AAACGGTCATGGGAATGTCTGTCTATCCCCCTTCATCGCGAGAGAAGTAC
AAGTATGGGTCGGTAGTGGAACGGTCGAGTCCTATCCCAACCTGGCGATA
CTGAACGAGCTGTCCAAGGAGTACGATGTTCAGCGGACGATGATCGAGGG
CATTAAAGGCGCAGCAGAGAAAGCTCAGATCGAGCACCTCCTCACCAGCC
AGTGCGACCGTCTGAAGAAAGAAAAGACCGAGGCCGAAGCGGAGGCTCTG
TCGGTCGCCACAAAACGTACAGTTGACATGTGCCAGCTGTGCAGCAAGCC
GAGTTACTCCACCCGATTTTGCAGAAGTCGTCAGGCAGCCAAGGGCAAGA
AAAGGTTCAGTGGGCGCTGCATGGGCTGCGGGAAAGAAAACACCGCGTAG back to top
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