prot_H-paniculata_contig1240.1512.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1240.1512.1
Unique Nameprot_H-paniculata_contig1240.1512.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length283
Homology
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BLAST of mRNA_H-paniculata_contig1240.1512.1 vs. uniprot
Match: D7G2I8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I8_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.450e-36
Identity = 84/172 (48.84%), Postives = 113/172 (65.70%), Query Frame = 0 
Query:  113 LNPREEDTDFEMTVDWDEELRKLNSGELDEKLKARDREIRKMTQKSDDP--ADWVKAEARKAQMAAQETSYQMRGALRNAPRWQQLSRDWRFWVGVVAAVSLLLSIISASGRSQDLLVYQQSADAFANSDRAGAGVALNSLAYVALLTHATAQATGDVASQLVESGATMVFA 282
            +NPRE D DFEMTVDWDEELRKLN+ +  +      R+ R +T+  +DP    W +  A+ AQ A ++ + Q+RGA+R APRWQ LSRD+RFW+G+V A+SL+ S+ISASGRS DL+V+         S+  G  +     A+ ALL   TA + GD A+QL E+GA MVFA
Sbjct:    4 VNPRE-DADFEMTVDWDEELRKLNASQYGK------RQERDLTKDMNDPEAVKWARKNAKIAQSAMEDRTKQVRGAMRKAPRWQTLSRDYRFWLGLVVALSLVSSVISASGRSHDLVVWND----VLGSEPFGEAL----FAHAALLAATTAHSAGDAATQLAETGAAMVFA 160
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BLAST of mRNA_H-paniculata_contig1240.1512.1 vs. uniprot
Match: A0A1Z5KP14_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP14_FISSO)

HSP 1 Score: 55.1 bits (131), Expect = 1.130e-5
Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 0 
Query:  115 PREEDTDF---------EMTVDWDEELRKL--NSGELDEKLKARDREIRKMTQKSDDPADWVKAEARKAQMAAQETSYQMRGALRNAPRWQQLSRDWRFWVGVVAAVSLLLSIISASGRSQDLLVYQQSADAF 236
            P+E+ +DF         + +VDWD E +K+  N G+ +E+         K   KSD      +  A +A   A+E + Q    + + P W  +  DW+FW+GV+AAVS+  S+I+ +G S +LL    S+D++
Sbjct:   46 PKEDSSDFSDFTIEGKSDYSVDWDAEWKKVVANQGQPEERPG-------KGYYKSD-----AELAALRAANQAREKALQTAANMPSLPTWNAVKGDWKFWIGVLAAVSVATSLIANAGSSGNLLPSTGSSDSY 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1240.1512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I8_ECTSI1.450e-3648.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5KP14_FISSO1.130e-531.58Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1240contigH-paniculata_contig1240:16751..25543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1240.1512.1mRNA_H-paniculata_contig1240.1512.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1240 9544..27006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1240.1512.1 ID=prot_H-paniculata_contig1240.1512.1|Name=mRNA_H-paniculata_contig1240.1512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=283bp
MVYDVCENIHRAQRRLEKGRSCVVTERRTLDYCTTDNTRTNFSPDTNMSP
VRPSMILCCTVAASCLASGAVQAFNTFLPTTSTNRAASIVSSSSLHQRWC
RPSRGARQMSMQLNPREEDTDFEMTVDWDEELRKLNSGELDEKLKARDRE
IRKMTQKSDDPADWVKAEARKAQMAAQETSYQMRGALRNAPRWQQLSRDW
RFWVGVVAAVSLLLSIISASGRSQDLLVYQQSADAFANSDRAGAGVALNS
LAYVALLTHATAQATGDVASQLVESGATMVFA*
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