mRNA_H-paniculata_contig1240.1511.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A6H5J814_9PHAE (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J814_9PHAE) HSP 1 Score: 387 bits (995), Expect = 1.230e-125 Identity = 196/273 (71.79%), Postives = 225/273 (82.42%), Query Frame = 1 Query: 79 LRMLWSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESVTPQYAEMRRLERDSEMAQRSNVQEGRTALVRGNGNGDSWSQDYVGETVRPGAEAYVARGVDGSDPYAPPEWDTDETLEAYI 897 L+MLWSGGRRTRGNEVTVNIERTS NSRRISGSIV+NRPIEDVWLTLTDYNRL+ YVPNLT+SK++P++DG IRLWQEGAQKIVGFDFRASVEMFMEEHFGDPEN+MAQRKLTFGLL+SRMF EFDGEWRMQFNSRKQ + +++Y+TKLFYMVHIRPKGPVPVLALEWQISNEVPNNL+ALK AAE+VTP+Y EMRR ER+ E A+R D + + GAEA+VA+G +G + Y PEW++DETLEAY+ Sbjct: 91 LQMLWSGGRRTRGNEVTVNIERTSRNSRRISGSIVINRPIEDVWLTLTDYNRLAKYVPNLTESKLRPSNDGGIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENKMAQRKLTFGLLESRMFNEFDGEWRMQFNSRKQFNTAQGPQYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLSALKLAAEAVTPEYVEMRRKEREQEAAKR----------FASPPPADDREKRQANAIAKGGAEAFVAKG-NGDEGYGQPEWESDETLEAYL 352
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: D7G841_ECTSI (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G841_ECTSI) HSP 1 Score: 381 bits (978), Expect = 2.250e-124 Identity = 197/271 (72.69%), Postives = 218/271 (80.44%), Query Frame = 1 Query: 85 MLWSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESVTPQYAEMRRLERDSEMAQRSNVQEGRTALVRGNGNGDSWSQDYVGETVRPGAEAYVARGVDGSDPYAPPEWDTDETLEAYI 897 MLWSGGRRT+GNEVTVNIERTS NSRRISGSIVVNRPIEDVWLTLTDY+RL+ YVPNLTQSKV+P++DG IRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMF EFDGEWRMQFNSRKQ + E++Y+TKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALK AAE+VTP+Y EMRR ER D + + GAEA+VA+G +G + Y PEW++DETLEAY+ Sbjct: 1 MLWSGGRRTQGNEVTVNIERTSRNSRRISGSIVVNRPIEDVWLTLTDYDRLAKYVPNLTQSKVRPSNDGGIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQFNTAQGPEYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKLAAEAVTPEYVEMRRRERXXXXXXXXXXXXXXXXXXX---XXDEREKREANAIAKGGAEAFVAKG-NGDEGYGQPEWESDETLEAYL 267
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A835ZJC3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJC3_9STRA) HSP 1 Score: 281 bits (720), Expect = 8.860e-86 Identity = 159/285 (55.79%), Postives = 199/285 (69.82%), Query Frame = 1 Query: 85 MLWSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGE--FEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESVTPQYAEMRRLERDSEMAQRSNV------QEGRTALVRGNGNGDSWSQDYVGETVRPGAEAYV------ARGVDGSDPYAPPEWDTDETLEAYI 897 MLWSGGRRTR ++VTVNIER S+NSRRISGSI+V++PIEDVWL LTDY+RLSDYVPNLTQS+ P+ G IRL+QEGAQ+IVGFDFRAS+ M MEEH+GDP++++A RK+ F L+DS MFT+F GEWR+QFNSR KG+ G+ + YSTK+FYMV+IRPKG VPV+ALEWQIS EVPNNLAA+KR AE + + + R+ D+ RS V Q TA + + ++ + Y A GVD + W+TDETLEAYI Sbjct: 1 MLWSGGRRTRPDQVTVNIERPSLNSRRISGSIIVDKPIEDVWLVLTDYDRLSDYVPNLTQSRQVPSPTGGIRLFQEGAQQIVGFDFRASLVMDMEEHYGDPDDKLAMRKIKFKLVDSAMFTDFSGEWRLQFNSRIVNKGAGPGQEKYTYSTKVFYMVNIRPKGVVPVVALEWQISEEVPNNLAAVKRTAEVMDSAFFDARQQAMDARQL-RSGVYISGYSQASATAAAVXXXXXANVALTTQQPVLQQQQQRYPLPPDQSAAGVDSNG------WETDETLEAYI 278
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A4D9CWA6_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA6_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.680e-53 Identity = 105/196 (53.57%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 91 WSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDG--------TIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESV 654 W GG+ EV VNIE S N RRIS SIVVNRP+ DVW LTDYN LS+YVPNLTQS++ G +RL+QEGAQ IVGF+F+AS+ M MEE + ++ QR++ F L+DS MF++F GEWR+Q SR + E+ YSTKLFYMV+++PKGPVPV ALEW+I +VP NL A+K A+E + Sbjct: 89 WRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVVEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRT-ACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 283
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: W7TTP4_9STRA (START-like domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP4_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.240e-52 Identity = 106/196 (54.08%), Postives = 135/196 (68.88%), Query Frame = 1 Query: 91 WSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDG--------TIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESV 654 W GG+ EV VNIE S N RRIS SIVVNRP+ DVW LTDYN LS+YVPNLTQS++ G +RL+QEGAQ IVGF+F+AS+ M MEE F + ++ QR++ F L+DS MF++F GEWR+Q SR + E+ YSTKLFYMV+++PKGPVPV ALEW+I +VP NL A+K A+E + Sbjct: 201 WRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRT-ACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 395
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A0G4H7W0_VITBC (Polyketide_cyc domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H7W0_VITBC) HSP 1 Score: 197 bits (501), Expect = 1.300e-52 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 1 Query: 124 VTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPA------------DDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATG--EFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESV 654 V+VNIER + N RRISGS++V+ +ED W LTDY+ L+ +VPNL S+ P D +RL+QEGAQKI+GFDFRA+V M M E GDPENRMA R + F L DS+ F++FDGEW++Q ++R+ + ATG E Y+TKLFY+V +RPKGPVPV+ALEW+I +VP NL A+K+AAE + Sbjct: 146 VSVNIERPAANVRRISGSVIVDTSMEDCWSILTDYDNLAAHVPNLVVSQRVPLPRSLASSGLNGDDMWQMRLYQEGAQKIIGFDFRAAVTMDMREVLGDPENRMAPRLIEFKLADSQFFSQFDGEWKIQAHTRRVRRHPATGDDEISYTTKLFYVVTVRPKGPVPVMALEWRIKEDVPTNLKAVKQAAEKI 336
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A6V1KTJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KTJ0_HETAK) HSP 1 Score: 194 bits (492), Expect = 3.370e-52 Identity = 106/195 (54.36%), Postives = 137/195 (70.26%), Query Frame = 1 Query: 85 MLWSGGRRTRGN-----EVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSR-KQLKGSATGE-FEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAE 648 M++ GRR G+ V V IE SMNSR+ISGSIV++RP++DVW L+DY+ L+D VPNLTQSK+ P G IRL+QEGAQKI+GFDFRAS+ M M E E + QRK+ F L++S MF FDGEW +Q SR K + T + + Y++K+FY V ++P+GPVPV ALEWQI +EVPNNL A+K A E Sbjct: 68 MVFGFGRRKDGSPGHEDNVDVRIEAPSMNSRKISGSIVIDRPVDDVWKILSDYDHLADNVPNLTQSKLVPHPTGGIRLFQEGAQKIIGFDFRASLTMDMTEVMEKAEEKFGQRKILFKLVESAMFNGFDGEWSIQNYSRIKNPNPTGTDDQWIYTSKVFYSVVVKPRGPVPVAALEWQIKSEVPNNLRAVKLATE 262
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A7S2SEL4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEL4_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.330e-49 Identity = 96/176 (54.55%), Postives = 127/176 (72.16%), Query Frame = 1 Query: 121 EVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAE 648 ++ V IER +MNSRRIS SIV++RP EDVW LTDYN L+ +VPNL QS++ G +RL+QEGAQKI+GFDF AS+ M MEE D +++ + F L++SR F+EFDG W++Q +SR+ + G+ T F Y+TKLFY V IRP GPVPVL LEW+I +VP NL +K A+E Sbjct: 132 KIPVLIERPTMNSRRISASIVIDRPPEDVWSILTDYNNLATHVPNLVQSRLLDRPGGGLRLYQEGAQKIIGFDFSASLVMDMEEVL-DSRAGSSKKAIQFKLVESRFFSEFDGIWQLQVHSRRPIPGTNT--FTYTTKLFYEVFIRPNGPVPVLPLEWRIREDVPTNLRGVKTASE 304
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A7S3T1R0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T1R0_EMIHU) HSP 1 Score: 174 bits (442), Expect = 5.100e-46 Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 1 Query: 124 VTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQ--RKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESV 654 V V+I T NSR IS SIVV+ P E VW LTDY+ LS +VPNL S+++P G IRL+QEGAQ+IVGFDFRAS+ M M E G + R A+ R++ F L++S MF F+GEWR+Q SR + +G + FEY+T+L Y V I P+G VPV ALEW+I +VP NL A++ AAE + Sbjct: 74 VPVSISTTGFNSRCISASIVVSAPPEAVWAILTDYDNLSTHVPNLVSSELRPHPTGGIRLFQEGAQRIVGFDFRASLTMDMTERKGGNDAREARGMRRIEFSLIESAMFGAFEGEWRVQPYSRTRARGGSRDAFEYTTRLSYKVDITPRGLVPVPALEWRIREDVPLNLRAVRAAAEKL 252
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Match: A0A7S0JC23_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC23_9EUKA) HSP 1 Score: 171 bits (434), Expect = 5.460e-45 Identity = 97/177 (54.80%), Postives = 119/177 (67.23%), Query Frame = 1 Query: 124 VTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRLSDYVPNLTQSKVKPADDGTIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFTEFDGEWRMQFNSRKQLKGSATGEFEYSTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKRAAESV 654 V VNI T NSR IS SI+V EDVW LTDY+ L+ +VPNL +S+++P G IRL+QEGAQKIVGFDFRAS+ M M E D R QR + F L+DS MF F+G WR+ SR + T ++EY+TKLFYMV I PKG VPV ALEW+I +VP NL ++K AAE V Sbjct: 76 VPVNIAMTGFNSRSISASIIVAAAPEDVWTILTDYDNLATHVPNLVKSELRPHPTGGIRLFQEGAQKIVGFDFRASLTMDMRELTDDA--RRGQRSIEFKLVDSLMFAAFNGVWRLAPYSRAPSRTDPT-KYEYTTKLFYMVDITPKGLVPVPALEWRIREDVPINLQSVKIAAERV 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1240.1511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1240.1511.1 >prot_H-paniculata_contig1240.1511.1 ID=prot_H-paniculata_contig1240.1511.1|Name=mRNA_H-paniculata_contig1240.1511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp MLWSGGRRTRGNEVTVNIERTSMNSRRISGSIVVNRPIEDVWLTLTDYNRback to top mRNA from alignment at H-paniculata_contig1240:1127..9210+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1240.1511.1 ID=mRNA_H-paniculata_contig1240.1511.1|Name=mRNA_H-paniculata_contig1240.1511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8084bp|location=Sequence derived from alignment at H-paniculata_contig1240:1127..9210+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1240:1127..9210+ >mRNA_H-paniculata_contig1240.1511.1 ID=mRNA_H-paniculata_contig1240.1511.1|Name=mRNA_H-paniculata_contig1240.1511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig1240:1127..9210+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |