prot_H-paniculata_contig124.1510.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig124.1510.1
Unique Nameprot_H-paniculata_contig124.1510.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1048
Homology
BLAST of mRNA_H-paniculata_contig124.1510.1 vs. uniprot
Match: A0A6H5L3B9_9PHAE (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE)

HSP 1 Score: 636 bits (1640), Expect = 9.740e-209
Identity = 476/1078 (44.16%), Postives = 642/1078 (59.55%), Query Frame = 0
Query:    1 MFSSITSFTEGFKLLSLDALQDEEEDEKKVLDTGDGAPIASTRHRSQSQQPLSTLSALSEERAVTAPXXXXXXXXXXXXVAAEAKTIKEVND-EWDWDDDGSETATKPGRRVRVGVHEQPAEQIVSKQRGDVLDRRETSANMNP--IDSSNALGENPLPGNDFAGMKCVGADPQQRIDKAGSLA------EFRDAS-YAVLRNAGLNDRVRKDCGACGAPFSDASNHITNPSAVLTSPGEASWCIRCREASASGTDNNDTRNATMPASEASNGKVDVSSCTSTSAEVSEHSDKAVEVPVD--IATEVT-----------------RISHDCMAQELK-----------GTAELSSRGIVEPS-GASPVDASELVGVLNELAAARKQASALEGALGGSQAEVHALREQVLMGKDVEEQQTRNATLLRDDIEAARMAYRESSEAHRRSAERVAELERELIVTREAVDNLKAEKSVLLEQMNMAMEGRLELEAQLRQLHTGLTEGQEAARQEGRKEVERLEVRVKELLKDRDRKQTELELQNARRKETRDMARDLESQLTTVQRTAEEHEAELNQMKEEMISLKREATEAKGNEATWATKYEALDRNFKQVRVQGRNVDNEVDQLRQTIAXXXXXXXWLETEGAALAHKVEEEGAERVTVVSSISHERDFLLRQ---VDRLEKEISELRRKQDAEAAEAGARAQTTVVLEEYRARAQQALKRANEITSQTAAENKRLQVELAKLSAEVAKERPMWSKSKDMEEVRQEEVVELKRKLANVDTDRDAAVVSIASLQDRLTEDEEERRNTNASVMRLEAQGKSLKQELQRQQKALAAGQERESMLSAKLSEKDAALRALEEGPRQEPVTMPRETKSDTTSHTPSPRHADVSPRSALDDDKQEAG----AEGIGAEAREIGWKDDGLQMTNQRFRSLSSEGESVDVSGGNVASQLVYVHQLQERMSKDQAEMRLLISELEASRAARDSQANIQTQLEKHLEAALLANKRLEELDKGRNAAINLEYLKNCVVGCLRTSEPSEHARLLPVITTILKLSKEEAEIIAKNITTRAQTEGSFGGSVPPPG 1030
            MFS   +F EGFK  SLDALQD++E+  K  D     P        + Q P+    + ++E                         + EV D EWDWD  G   AT   R    G+ ++    + +      +      A ++P  + S + L ++    ++ AG   V A+   R + AG+ A      E R+   +    N+G +   R       +     S++   P+A+    G +  CI   +    GT++    NA  P   +S    D    +  +A       KA+ + +D  +AT  T                 R+ H   A+ ++            TA  +   +V+P+   +  D   +V +  EL+  +  AS LEGAL  S++EV  LRE +   +D     TR    L D++ A RM ++ES+ AH+R+AE+   LE EL   R  V++L+AE + L  +++  +E R  LE +LR L  G+TEGQEAARQEGR+EVERLE R+++LLKDRDRKQ EL+LQNARRKETR+MARDLESQL  V+R A+E E EL++ +++M++LK+   EA   + TWATKYEAL+RNFKQVR Q   +++E+++ R+           +E E A L  +VE EGAERVTVV+S+S ERDFLLRQ   VDRLE+E+ ELRR Q+A+A  A ARAQTT VLEEYR RAQQALKRANEITSQTA+ENKRL+ E+ KLS EVA++RP+W +SK +EEV + EV ELK K+AN  T+      + A+L+ ++ E EEERR+ + SVMRLEAQGKSLKQELQRQQKALAA QE E  L  +L++++AAL+A E   R++      +  +D   +  SP  A  S     D++K  +       G+G EA    W +   +   +   S+ SE +S DV+ G+V  QL YVHQL+ERMSK+Q EMR LISELEASRAA D+QA  Q QLEK LEAALL  KRL++LD GRNAAINLEYLKNCVVG LRTSEPSEHARLLPVITTILKLS++EA +IAKNI+TRAQ +GSFGGS+PP G
Sbjct:    1 MFSGFDNFAEGFKRFSLDALQDQDENTSK--DEQQRLPALP-----EQQHPMEHTESPTKEPP---------------------PQLAEVEDNEWDWDH-GHAGATNAQRDGVGGLRQKHGAHVRNSPHATSV----APAGISPAAVASPSELDQSTF--DEQAGGVVVEAEEALR-ENAGTQAAKEGMEERREGQMFGGETNSGPSTLARDSSAPSSSVEEGFSDNTDTPAAL----GRSEPCIGTIQ---DGTEDIHLGNAPTPDPSSSGKLQDFLEGSKPAAA------KAIGLAIDEGVATNTTNDSSAEGPTDTNWGGERRVDHQENAERIQDGSSPQKSPEAATAGAAGTAVVKPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDT----TRK---LSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNARTLVESLRAESAALKAKVDEGVEDRHALEGKLRHLQAGVTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSIRIESELEEAREHATR-------IEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAIAVDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQGKSLKQELQRQQKALAAAQENEVTLQTRLADQEAALQAAENRQRRKHSPEKVDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPE--RRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGG 1013          
BLAST of mRNA_H-paniculata_contig124.1510.1 vs. uniprot
Match: A0A0A1XCD8_ZEUCU (GRIP and coiled-coil domain-containing protein 2 n=3 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1XCD8_ZEUCU)

HSP 1 Score: 58.5 bits (140), Expect = 8.140e-5
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  884 SEGESVDVSGGNVASQLVYV--HQLQERMSKDQAEMRLLISELEASRAARDSQANIQTQLEKHLEAALLANKRLEELDKGRNAAINLEYLKNCVVGCLRTSEPSEHARLLPVITTILKLSKEEAEI---IAKNITTRAQTEGSFGGSVPPPGFGGGG 1035
            ++  + D++ GN +++ ++V  H  +E ++K ++ +R L + L    A  +      TQ+   L+  L   +R  E ++  +   N EYLKN V+  L  S   E  RL+PV+ TILKLS+EE +I   +AK      +T+G   GS  P  FGGGG
Sbjct: 1142 NDSNTFDLNTGNSSAESLHVELHATRELLTKQESRVRHLTALL----AENEQDLAKLTQMNDMLKEELRRQERAVEREQHMH---NAEYLKNVVLKFLTLSNGDERIRLVPVLHTILKLSREEKDILNCVAKGQKLPTETQGRGWGSFLPL-FGGGG 1290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig124.1510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3B9_9PHAE9.740e-20944.16GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A0A1XCD8_ZEUCU8.140e-533.12GRIP and coiled-coil domain-containing protein 2 n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 571..598
NoneNo IPR availableCOILSCoilCoilcoord: 395..429
NoneNo IPR availableCOILSCoilCoilcoord: 617..651
NoneNo IPR availableCOILSCoilCoilcoord: 466..549
NoneNo IPR availableCOILSCoilCoilcoord: 903..923
NoneNo IPR availableCOILSCoilCoilcoord: 743..791
NoneNo IPR availableCOILSCoilCoilcoord: 662..700
NoneNo IPR availableCOILSCoilCoilcoord: 938..958
NoneNo IPR availablePANTHERPTHR23157FAMILY NOT NAMEDcoord: 576..1010
IPR000237GRIP domainSMARTSM007551gripcoord: 964..1011
e-value: 5.1E-9
score: 46.0
IPR000237GRIP domainPFAMPF01465GRIPcoord: 966..1007
e-value: 4.0E-13
score: 49.0
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 961..1011
score: 11.63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig124contigH-paniculata_contig124:39718..51212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig124.1510.1mRNA_H-paniculata_contig124.1510.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig124 39665..51496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig124.1510.1 ID=prot_H-paniculata_contig124.1510.1|Name=mRNA_H-paniculata_contig124.1510.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1048bp
MFSSITSFTEGFKLLSLDALQDEEEDEKKVLDTGDGAPIASTRHRSQSQQ
PLSTLSALSEERAVTAPPPPTATAAPTTTVAAEAKTIKEVNDEWDWDDDG
SETATKPGRRVRVGVHEQPAEQIVSKQRGDVLDRRETSANMNPIDSSNAL
GENPLPGNDFAGMKCVGADPQQRIDKAGSLAEFRDASYAVLRNAGLNDRV
RKDCGACGAPFSDASNHITNPSAVLTSPGEASWCIRCREASASGTDNNDT
RNATMPASEASNGKVDVSSCTSTSAEVSEHSDKAVEVPVDIATEVTRISH
DCMAQELKGTAELSSRGIVEPSGASPVDASELVGVLNELAAARKQASALE
GALGGSQAEVHALREQVLMGKDVEEQQTRNATLLRDDIEAARMAYRESSE
AHRRSAERVAELERELIVTREAVDNLKAEKSVLLEQMNMAMEGRLELEAQ
LRQLHTGLTEGQEAARQEGRKEVERLEVRVKELLKDRDRKQTELELQNAR
RKETRDMARDLESQLTTVQRTAEEHEAELNQMKEEMISLKREATEAKGNE
ATWATKYEALDRNFKQVRVQGRNVDNEVDQLRQTIAQLRQTIAWLETEGA
ALAHKVEEEGAERVTVVSSISHERDFLLRQVDRLEKEISELRRKQDAEAA
EAGARAQTTVVLEEYRARAQQALKRANEITSQTAAENKRLQVELAKLSAE
VAKERPMWSKSKDMEEVRQEEVVELKRKLANVDTDRDAAVVSIASLQDRL
TEDEEERRNTNASVMRLEAQGKSLKQELQRQQKALAAGQERESMLSAKLS
EKDAALRALEEGPRQEPVTMPRETKSDTTSHTPSPRHADVSPRSALDDDK
QEAGAEGIGAEAREIGWKDDGLQMTNQRFRSLSSEGESVDVSGGNVASQL
VYVHQLQERMSKDQAEMRLLISELEASRAARDSQANIQTQLEKHLEAALL
ANKRLEELDKGRNAAINLEYLKNCVVGCLRTSEPSEHARLLPVITTILKL
SKEEAEIIAKNITTRAQTEGSFGGSVPPPGFGGGGTRGWWSGKTSKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom