mRNA_H-paniculata_contig124.1509.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: D7FW72_ECTSI (Arginine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW72_ECTSI) HSP 1 Score: 1144 bits (2960), Expect = 0.000e+0 Identity = 617/921 (66.99%), Postives = 718/921 (77.96%), Query Frame = 1 Query: 178 MADELQVEIVALEDKVQQLKASGGATAAVTAEVAKLLEAKNRYKETIGIEYTAT--QPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGTPTPPDSSNPVAANSTAPAPAAKVVAPCAPSGPLMYLNSDGPGPLKCVAAARLFGVKVDAAEMNPAGDRSFASGCALTVGSSLIFGPNAICRYFSYKGTA------TVDSA-AVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSPLQYLEDKLSGQWLVDGAVPSLADVVVGVTAKTIVDSLGEGDAMSAFPKVRSYVQRWSETNAFASGITDVGEFTKTAKATALKAGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGPASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEVKPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKHHRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 MAD E+VA+ + ++QLKA+ A ++ EVAKL++ K YKE G +Y + K XXXXXXXXXXXXXXXXXX A+ S+ P+ MYL SDGPGPLK + AA+ FGV+V+AA+ NPAG+ S ASGCA++ G+S+IFG NA+CRYFSYKG + T D A AVEEWL+WE LA E+A+A K++GG P + L+ L++LEDKL+G WL++G PSLADVVVGVTA+ + +LGE +A S KV +Y QR E A + + FTK +K +LKAGL ASLL +FDAA+F+AWP AK+AG+ SSSV KC++YK+GDFQCN AM LF ALKG G P+SP AAASA++ +LP +PL+D+TSV+ G+INIRLRPAFIN+ IA+++++GPAPPEVK RVVVDFSSPNIAKEMHVGHLRSTIIG++ICR+ EFCGHTV RHNHVGDWGTQFGMLINYMKEAYPNFL DPPNITDLTTFYKAAK RFD+S+EFKEASRNTVV+LQSGD AC EVWTLLCDISRKEFQKVYDRL VTLEE+GESFYND IP ID LA AGLVS+DDGADIVRLEHFTYPLIVRKRDGGFGYDSTDM AIRYRL+TLKCDW+I ITDAGQASHFHM FD ARAAGWV + +LEHLGFGVV G DGKKFKTRSG+TVRLVDLLDEAV+RM A IQERMD GK+TT+ E+AAA AAE+GYGAVKY+DL+Q P+TSY FSYDRML T GNTA+YLQFAHARLASIL KA++E VD+ ALK PE V V H++ER LAFELLMFSDV+EAC+ADLG NRLCEYLYTLATKFTDFVTNCRVL S EQ+SRLLLCEATGVTMRKCFSLLGM AL RI Sbjct: 1 MADAAMAEVVAIGEGIRQLKAAKADKAVISKEVAKLMKTKQHYKEVTGSDYVPPPQEKKAKSTPKPQDAVPPSSSGPSKTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRSSLPS---------------MYLGSDGPGPLKGLTAAKFFGVEVEAADTNPAGELSSASGCAVSTGTSVIFGANAVCRYFSYKGKSSSPKGPTADPAGAVEEWLDWETGTLAPAERALAAWKEAGGSVPTEALAALKHLEDKLTGTWLLEGDEPSLADVVVGVTAQAAITALGEAEATSTLAKVLAYAQRVGEMPACKQAASTIDTFTKASKGVSLKAGLQASLLAMFDAAMFKAWPLAKSAGITSSSVRKCADYKNGDFQCNAAMALFKALKGGDGAPSSPQAAASAIVASLPVNPLVDTTSVSPQGYINIRLRPAFINQSIAKVIKNGPAPPEVKKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPACKEVWTLLCDISRKEFQKVYDRLDVTLEEHGESFYNDMIPSTIDMLAEAGLVSRDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMTAIRYRLKTLKCDWIIGITDAGQASHFHMCFDAARAAGWVDEGTKLEHLGFGVVLGPDGKKFKTRSGDTVRLVDLLDEAVRRMAASIQERMDEGKMTTTKEAAAAAAAEIGYGAVKYYDLRQHPSTSYVFSYDRMLDTRGNTAVYLQFAHARLASILLKAQDELHVDVTALKASPEKVSVEHESERALAFELLMFSDVIEACLADLGPNRLCEYLYTLATKFTDFVTNCRVLGSDEQTSRLLLCEATGVTMRKCFSLLGMKALDRI 906
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A835ZA36_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA36_9STRA) HSP 1 Score: 717 bits (1851), Expect = 2.870e-236 Identity = 428/884 (48.42%), Postives = 520/884 (58.82%), Query Frame = 1 Query: 634 AARLFGVKVDAAEMNPAGDRSFASGCALTVGSS-LIFGPNAICRYFSYKGTATVDSAAVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSPLQYLEDKLSGQWLVDGAVPSLADVVVGVTAKTIVDS-----------LGEGDAMSAFPKVRSYVQRWSETNAFASGITDVGEFTKTAKATALKAGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGP-ASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEV---KPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSK--------DDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFD-----------------------TARAAGWVK--KHHRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVVVAHDAERGLAFELLM-----------------------------------------------------FSDVVEACMA----------------------DLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 AA L G V A +PA +FA C L V S L+FG +A CRYF Y A D+AA ATA AQ A V+ GG +L+ L+ G +L G+ S+AD + A+ + + A P++ ++ + A G A GL S+ GLF AA+ +A+P G +++ KC+ YKHGDFQCN M L+ LK GG A P A A++ LP SPL++STSVAG GFIN+RLRP FI++ + + RDGPAPP + + ++ VDFSSPNIAKEMHVGHLRSTIIGD+ICR+ EF GH VLR NHVGDWGTQFGMLIN+MK AYP+FL PPN+TDLTTFYK AK+ FD+S+EFK+ SR TVV+LQSGD C +VW LLC+ISR EFQKVYDRLGV LEE GESFYN IPG +D + A GL+ + GA + L+ FTYPLIVRK DGG+GYDSTDM A+ YRL TL CDWVI +TDAGQ SHF M+F+ A+A GW++ RLEH+GFGVVQGEDGK+FK+RSG+TVRLVDLLDEAVKRM A + ER+ +GK SPE AA +GYGAVKYFDL+Q P T+Y FSYDRML T GNTA+YLQFAHARL SILRKA +E+ + L + +AHDAER LAFEL+ F+DVVEA A DL NRLCEYLY L+T+FTDFVTNC VL S E+ SRLLLCEATG MRK LLG+T LY+I Sbjct: 138 AAALAGAAVAPALSHPAPHLTFAGSCVLVVKKSELVFGTSAACRYFMYTADAAGDAAAES------ATAWAQ-----AQVQGGGGA----LLAALEARLGSQEGGFLA-GSAASVADAIAAPAAQAALSADAXXXXXXXXXXXXXXXXXALPQLAGVAEQAAALVAACRGXXXXXXXXXAGSADVAGQGLLGSIRGLFTAAISKAFPEL---GHVEAALGKCAQYKHGDFQCNSPMSLYPLLKARGGGGVAKPHDVARAIIAALPPSPLVESTSVAGPGFINVRLRPTFISDAVRALARDGPAPPPLPANRKLKIAVDFSSPNIAKEMHVGHLRSTIIGDTICRILEFAGHAVLRVNHVGDWGTQFGMLINHMKTAYPDFLTHPPNLTDLTTFYKGAKQAFDESEEFKDVSRKTVVKLQSGDAECLQVWKLLCEISRGEFQKVYDRLGVRLEECGESFYNKMIPGTLDKMEAKGLLXXXXXXXXXVEGGATVCMLDGFTYPLIVRKSDGGYGYDSTDMTAVDYRLNTLGCDWVIYVTDAGQRSHFDMVFEXXXXXXXXXLLGVDDPVADRDRGAAKACGWLQDASAQRLEHVGFGVVQGEDGKRFKSRSGDTVRLVDLLDEAVKRMHATLVERVASGKSPLSPEKVDEAAAAIGYGAVKYFDLRQHPATNYVFSYDRMLDTRGNTAVYLQFAHARLCSILRKAADEQGARVPDLLASGVPITLAHDAERALAFELMQARGAVANACRPLTIEHNSRACVVLRLDDTGAQRSARSGVELTRLQPRKLQCVYFTDVVEAASAHPQPRDKHASLDFTDVVQDFLRDLLPNRLCEYLYQLSTRFTDFVTNCHVLHSAERDSRLLLCEATGAVMRKVMELLGLTPLYQI 1002
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: F0XWA2_AURAN (Arginine--tRNA ligase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWA2_AURAN) HSP 1 Score: 654 bits (1686), Expect = 9.350e-218 Identity = 343/585 (58.63%), Postives = 417/585 (71.28%), Query Frame = 1 Query: 1186 LFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALK--GTAGGPASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEVKPA-----RVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGW--VKKHHRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 LF AA+ A P A G S V++C N GD+QCN M +F LK G A P SP A A+ +PA+ ++ S SVA GFIN + + ++ R+ G A P A +V+VDFSSPNIAKEMHVGHLRSTIIGD+ICR+ EFCGH V R NHVGDWGTQFGMLI +M+EAYP+FLQ+PPNITDLTTFYK AKKRFD+ ++FKE SR TVV LQ+GD C +W++LCDISRKEF KVY RL V +EE+GES+YN IPGAI L AGLV+ + GA V L ++PLI+RK DGG+GYDSTDMAAI +RL+TL +WV+ +TD GQA HFHM F+ ARAA W H RL H+GFGVVQGEDGK+FKTRSGETVRLVDLLD +V+RM+ + +R+ GK P AA +GYGAVKYFDL Q P+T+YKFSYD+MLST+GNTA+YL FAHARLASI+ KA E +KVD A V+ H ER LAFEL F++VV + D R+C+YLY +ATKFT+FVT C+VLD P + RL+LCEATGV MRKCF LLG+T L +I Sbjct: 4 LFAAAIAAAVPEA---GDVSPGVMRCGNAAFGDYQCNAPMGIFKTLKANGVARLP-SPRAVGEAIAAAVPANGVLKSASVAPAGFINAHVEESLLSAHAQRVAASGVAAPPPLSAFGGARKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFCGHDVRRVNHVGDWGTQFGMLITHMEEAYPDFLQNPPNITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDARCRAIWSVLCDISRKEFDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAACVFLPGHSFPLIIRKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTDLGQAEHFHMCFEAARAAKWDDASAHVRLHHVGFGVVQGEDGKRFKTRSGETVRLVDLLDASVERMEKSLSDRVAEGKCALPPAEVKRAAAAIGYGAVKYFDLHQHPSTNYKFSYDKMLSTSGNTAVYLLFAHARLASIVAKARETRKVDAKAAAAGAALVLTQHAKERALAFELTQFAEVVLSVADDFLPVRICDYLYKIATKFTEFVTECKVLDDPRMAERLVLCEATGVVMRKCFDLLGITYLMQI 584
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A7S3H4P3_9STRA (Arginine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4P3_9STRA) HSP 1 Score: 659 bits (1699), Expect = 7.890e-215 Identity = 350/592 (59.12%), Postives = 424/592 (71.62%), Query Frame = 1 Query: 1159 AGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAG--GPASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEVKPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDD-GADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKHHRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVV-VAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQS---SRLLLCEATGVTMRKCFSLLGMTALYRI 2913 AGL +SL +FDAAL A+P A S + +C N GDFQCN AM L ALKG G GP SP A ++ +P +P++ +TS GFINI L A + IA IV++G PP + P +V+VDFSSPNIAKEMHVGHLRSTIIGDS+CRL EFCG V R NHVGDWGTQFGMLI Y++EAYP+ L +P NI+DLT YKA+KKRFD+ + FK SRN VV+LQ+GD ACT +W LLC ISR EFQKVYD L ++L E GESFYN IP I L LV D+ G ++RL HFT PLIVRK DGG+GYDSTDMAA++YR QTL+ W+ ITDAGQA HFHM FD ARAAGWV +HHR++H+GFGVV G+DGK+FKTRS ETVRL+DLLD A RMK ++ R + GK E A +GYGAVKYFDLKQ+P ++Y FSYDRML T G+TA+YL FA+ARLASILRKA++E+ VD+A L ++++ VAH AER LAFELL DV+++ +ADL NRLC+YL TLA FTDFVT C VL++ SRLLLCEAT M +CF LLG+ L RI Sbjct: 330 AGLMSSLKIVFDAALIAAFPQVPEARAGSV-ISRCGNAAFGDFQCNNAMGLSKALKGLEGYQGPVSPKDVAERIIKAIPENPIVSATSSVPNGFINITLSTATLTNSIAGIVQNGVKPPVLPPQKVLVDFSSPNIAKEMHVGHLRSTIIGDSVCRLLEFCGFDVQRVNHVGDWGTQFGMLITYLQEAYPDILTNPVNISDLTVIYKASKKRFDEDETFKLTSRNNVVKLQAGDPACTAIWQLLCQISRAEFQKVYDALDISLTEVGESFYNPLIPDTIRELDDLKLVETDESGMLLLRLPHFTIPLIVRKSDGGYGYDSTDMAALKYRTQTLQRQWLGYITDAGQAPHFHMCFDAARAAGWVPEHHRVDHIGFGVVCGDDGKRFKTRSSETVRLIDLLDAAKDRMKESLRVRAEEGKSALQGEELENAARIIGYGAVKYFDLKQNPVSNYVFSYDRMLDTKGDTAVYLLFAYARLASILRKAKDERNVDMAPLHLQAQSLLSVAHPAERALAFELLQLGDVIKSVLADLLPNRLCDYLKTLAVAFTDFVTKCHVLNADNAEVMHSRLLLCEATRRVMAQCFQLLGIGTLERI 920
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: W7TZ28_9STRA (Arginine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ28_9STRA) HSP 1 Score: 638 bits (1645), Expect = 3.520e-208 Identity = 378/756 (50.00%), Postives = 479/756 (63.36%), Query Frame = 1 Query: 715 LTVGSSLIFGPNAICRYFSYKGTATVDSA-AVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSPLQYLEDKLS----GQWLVDGAVP--SLADVVVGVTAKTIVDSLGEGDAMSAFPKVRSY---VQRWSETN--AFASGITDVGEFTKTAKATALKAGLHASLLGLFDAALFRAWPT-AKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGP---ASPMAAASAVLTNLPAS--PLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEVKPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRL--EHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKHH---RLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 L +G+ + G R + GT+ A +EW+EW LA + ++ +L L LE L+ + A P +LAD+V+ + + GE + +P R++ V R E+ A A+ + + G F T + GL A + LF A+ A+P A + V KC N HGD+QCN M ++ A+K T G P A P A A++ +LPA + SVAG GFIN+R++ A++ + I+ GP + RV+VDFSSPNIAKEMHVGHLRSTIIGDS+CR+ EF GH V R NHVGDWGTQFGMLI Y+KE YPNF+QDPPNITDLT FYKAAK RFD+S FKE +R VVELQ+GD +W LLCDISR EFQKVYDRL V LEEYGESFYNDRIP I+ L A L+ +D GA I+ +H PL+VRK DGG+GYDSTD+AAIRYRL+ L DWVI ITDAGQA+HFHMIFD AR AGWV + H RL+H+GFGVVQGEDGK+FKTRSG+TVRLVDLLDEAV RM A + +R++ GK S A AA +GYGAVKY DLKQ+P T Y+FSYDRML T G+TAIYL F AR SILRKAEEEK +D+ AL+ + VV+ H ER LA EL F++ ++ + +L NRL Y++ L+ + TDF+ C VL P+ RL+L AT +T+ C LLG+T L +I Sbjct: 81 LDMGTQTVSGVEGAVRALALNGTSLAACRPATDEWVEWGFRRLAAATSHASEEEEGAR----HLLQELAVLEAALARCPRSLLTSEAAKPITTLADIVLAPLSLRALKFFGEHE----YPLTRAWAASVVRGPESPYAATAALVQEGGAFEGTGGKIDPRRGLLAVITALFTEAMHEAFPELAGNPNFRRADVAKCGNAVHGDYQCNSPMAIYKAIKAT-GRPSVLARPQDVAKALIDSLPAKGHEVCAEVSVAGAGFINVRVQGAYLQARVKDILLHGPQAAMARKLRVLVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEFLGHDVARVNHVGDWGTQFGMLIKYLKEEYPNFMQDPPNITDLTGFYKAAKARFDESPAFKERARVGVVELQAGDPESRAIWKLLCDISRAEFQKVYDRLDVRLEEYGESFYNDRIPAVIEELKAENLLEEDGGAMIMWCGGKH-QIPLMVRKSDGGYGYDSTDLAAIRYRLKDLSRDWVIYITDAGQATHFHMIFDAARMAGWVDEEHGRHRLDHVGFGVVQGEDGKRFKTRSGDTVRLVDLLDEAVVRMTASLTQRIEDGKSALSKSEACEAAAALGYGAVKYADLKQNPGTDYQFSYDRMLDTKGDTAIYLLFTCARFHSILRKAEEEKGIDVKALEAGGD-VVLEHPTERALALELAQFAEALQQAVLELMPNRLTSYVFFLSARGTDFLEACHVLTHPK---RLVLVHATALTIAHCLELLGITPLTKI 822
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A7S3NN71_9STRA (Arginine--tRNA ligase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NN71_9STRA) HSP 1 Score: 630 bits (1626), Expect = 1.330e-205 Identity = 374/776 (48.20%), Postives = 474/776 (61.08%), Query Frame = 1 Query: 706 GCALTVGSSLIFGPNAICRYFSYKGTATVDSAAVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSPLQYLEDKLS-------------GQWLVDGAVPSLADVVVGVTAK------TIVDSLGEGDAMSAFP-----KVRSYVQRWSETNAFASGITDVGEFTKTAKATA------LKAGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGPASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPA-PPEVKPA-----RVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKH-HRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAAL---KTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 GC + S + G CR +Y VD ++E WL+ E + + V + ++ + P S + L+D S Q AV L V + AK T + + A+ AFP K+ S VQ + G VG+ + + + ++ + + GL WP AK V++C N K GDFQCN M +F A+KG + ASP A+ +P + +I S +VA GF+N+ LR F+ I ++ PP+V+ A +V+VDFSSPNIAKEMHVGHLRSTIIGD+I R+ EFCGH VLR NHVGDWGTQFGMLI ++ E YP+F ++PP++TDLT FYKAAK RFD F + +R TVV+LQ+GD C VW LLCDISRKEF KVY RL + LEE+GESFYN IP AI L + LVS D GA IV LE +YPLIVRK+DGGFGYDSTDMAA+ YRL L+ DW++ +TD GQA HFHM F+ A AGWV+K H+L H+GFGVVQG+DGK+FKTRSG+TVRLVDLLD AV RM+ + ER+ AGK S + AA +GYGAVKYFDL Q P T+Y FSYD+MLST+GNTA+YL FA+ARLASI+RKA++E D+ A P + + H ER LAFEL FSDVV D RLC+YLY LATK T+FVT C+VL P Q RLLLC ATG+ MR+CF+LLG+ L RI Sbjct: 50 GCVVATSSRFVCGAIHACRLLAYTNGIEVDDESLE-WLDAELIPALRNLENVFNGPQNIKIAP----SVVPGLDDAFSVILTAMIPAPESIEQSQARIAVAKLLQVAEKMIAKKERCIFTALAGIECRQALKAFPVGTFPKLESNVQIIDTSALKVLGRKAVGQEPENGQLISSYIEQIIEIAIETAFPGLH-------WPDAK--------VMRCVNEKFGDFQCNAPMSIFKAIKGKSKSIASPHGVGEAIAQAIPKNNIIASVTVAPTGFVNMFLRDNFLAAEITKLSTFMTVVPPDVQRAFGGIKKVLVDFSSPNIAKEMHVGHLRSTIIGDTISRVLEFCGHDVLRVNHVGDWGTQFGMLIKHLAEQYPDFERNPPDLTDLTAFYKAAKARFDQDATFADDARATVVKLQAGDDQCRRVWQLLCDISRKEFDKVYARLDIQLEEFGESFYNAMIPNAIQLLENSALVSYDQGAAIVHLEGHSYPLIVRKKDGGFGYDSTDMAALHYRLFDLERDWLVYVTDLGQAEHFHMCFEAATNAGWVQKDKHKLRHVGFGVVQGDDGKRFKTRSGDTVRLVDLLDAAVDRMRESLLERVKAGKCPLSSDEVQQAAAIIGYGAVKYFDLHQHPETNYIFSYDKMLSTSGNTAVYLLFAYARLASIIRKAKDEHHTDIVATLLNNQQPTPLNLQHAKERALAFELTQFSDVVVTVATDYIPARLCDYLYKLATKLTEFVTECKVLGDPRQYHRLLLCHATGIIMRQCFALLGIKPLDRI 805
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A7S3ZX63_9STRA (Arginine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX63_9STRA) HSP 1 Score: 632 bits (1631), Expect = 1.680e-205 Identity = 366/749 (48.87%), Postives = 459/749 (61.28%), Query Frame = 1 Query: 700 ASGCALTVGSSLIFGPNAICRYFSYKGTA-TVDSAAVEEWLEWE--ATALAQTEKAVAHVKKSGGVPPPQVLSPLQYLEDKLSGQWLVDGAVPSLADVVVGVTAKTIVDSLGEGDAMSAFP-KVRSYVQRWSETNAFASGITDVGEFTKTAKATALKAGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGPA-SPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAPPEVKPA-----RVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKHHRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETV-VVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 + GC L + G CR ++ A + D+ A + W +W A A AQ + V K+ P + A +LA ++V K + S A++A +V + WS EF LF A+ RA P+ K V +C+ GDFQCN M +F ALKG SP A +A+ NLP + ++ S SVA GF+N ++ A + + + + G APP A +V+VDFSSPNIAKEMHVGHLRSTIIGD+ICR+ E+CGH V R NHVGDWGTQFGMLI++M+EAYP+F +PPNITDLT FYK AKKRFDD + FK+ SR TVV LQ+GD C E+W LLCDISRKEF +VY RLGVTLEE GES YN IP AI L AGL + DGA V LE ++PLIV+K DGGFGYDSTD+AAI +RL+TL DWV+ +TD GQA HFHM F+ A AGW RL H+GFGVVQGEDGK+FKTRSGETVRLVDLLDE+V RM+ +++R+ GK SP+ + A ++GYGAVKY DL Q P T+YKFSYD+MLST+GNTA+YL FAHARLASI+RKA K VD A K + + AH ER LAFEL FS VV + + R+C+YLY ++ KFT+FVT C+VLD + R++LCEATGV MR CF LLG+ L +I Sbjct: 164 SDGCVLDTPDGPVGGAANACRLLAFASAAFSADTPAADGWCDWSGRADAEAQAASVLDEVGKALAKNDPGL-------------------AKGTLARILVACDCKVALKSAKGSPAVTALANEVAGEEKPWSPAQD-----ESTLEFVTR----------------LFAEAIKRAAPSLKD---QDPVVQRCAIASFGDFQCNAPMGIFKALKGQGDTSYNSPRAVGAAIADNLPPNSVLVSASVAPAGFVNAKIDNALLGDFCREVAQKGKAPPPPIKAFGGKRKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEYCGHDVHRINHVGDWGTQFGMLISHMEEAYPDFTSNPPNITDLTVFYKNAKKRFDDDEAFKKKSRETVVALQAGDPRCREIWALLCDISRKEFARVYKRLGVTLEEVGESHYNSMIPNAISLLEKAGLTTDSDGATTVFLEGHSFPLIVKKSDGGFGYDSTDIAAIHHRLKTLGVDWVVYVTDLGQAEHFHMCFEAAEKAGWTSSEGRLCHVGFGVVQGEDGKRFKTRSGETVRLVDLLDESVTRMEKSLKDRVAEGKCALSPDEVKSAAEKIGYGAVKYADLHQHPATNYKFSYDKMLSTSGNTAVYLLFAHARLASIVRKASA-KGVD--AKKAASNKMDLCAHPKERALAFELTQFSGVVASVAEEFLPVRVCDYLYKVSCKFTEFVTECKVLDDARMAERVVLCEATGVVMRACFDLLGIEYLMQI 866
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A7S2XZ92_9STRA (Arginine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ92_9STRA) HSP 1 Score: 603 bits (1555), Expect = 1.920e-200 Identity = 296/444 (66.67%), Postives = 353/444 (79.50%), Query Frame = 1 Query: 1534 VDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKHH---RLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAAL-KTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEA 2853 VDFSSPNIAKEMHVGHLRSTIIGD++CR EFCGH V R NHVGDWGTQFGMLI Y+KE YP+FL PPNITDLT+FYKAAK RFD+S EFK+ ++ VV+LQSGD C ++W LLC+ISR EF+KVY RL V L E GESFYN IPG I+ L + LV +D+GA ++ L+HF +PLIVRK DGG+GYDSTDMAA++YRL+ L C WV+ +TDAGQA HF+ +FD A+AAGW + RL H+GFGVVQGEDGKKFKTRSGETVRLVDLLDEAV RM+ +++R+ GK P+ A A+ +GYGA+KYFDL+Q P T+Y FSYDRML T GNTA+YL FAHARLASILRKA EEK VDL L ET+ +AH +ER LAFE++ F DVVE+ + +L +RLCEYLY LATKFT+FVTNC+VLDSPE +SRLLLCEA Sbjct: 1 VDFSSPNIAKEMHVGHLRSTIIGDTLCRTLEFCGHEVTRANHVGDWGTQFGMLIQYLKEEYPDFLTQPPNITDLTSFYKAAKMRFDESPEFKKIAQLNVVKLQSGDEQCRKIWHLLCEISRVEFEKVYSRLQVKLVECGESFYNPMIPGVIEELESKQLVKEDNGAKVIFLDHFKFPLIVRKSDGGYGYDSTDMAAVQYRLKQLGCSWVVYVTDAGQAEHFYNVFDAAKAAGWCDEQEGGTRLHHVGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVTRMRRSLEDRVKEGKCLLQPQEIAQAASALGYGAIKYFDLQQHPATAYVFSYDRMLDTRGNTAVYLLFAHARLASILRKAAEEKGVDLGPLVDRALETLHLAHPSERALAFEIMQFGDVVESTVQELMPSRLCEYLYNLATKFTEFVTNCKVLDSPEMNSRLLLCEA 444
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A5D6XU35_9STRA (Arginine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU35_9STRA) HSP 1 Score: 613 bits (1580), Expect = 5.760e-199 Identity = 371/807 (45.97%), Postives = 482/807 (59.73%), Query Frame = 1 Query: 586 LMYLNSDGPGPLKCVAAARLFGVKVDAAEMNPAGDRSFASGCALTVGS------SLIFGPNAICRYFSYKGTATV-DSAAVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSP-LQYLEDKLSGQWLVDGAVPS--------LADVVVGVTAKT----IVDSLGEGDAMSAFPKVRSYVQRWSETNAFASG--------ITDVGEFTKTAKATALKAGLHASLLGLFDAALFRAWPTAKAAGVNSSSVVKCSNYKHGDFQCNVAMPLFTALKGTAGGPASPMAAASAVLTNLPASPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDGPAP-PEVKPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQDPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVSKDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKH-HRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAALKTVPETVV-VAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 L+ GP LKC A L G K ++ + + A G L V + +F NA+CRY + A + D AV+EWLEWE+ LA +A + + P P+V + L L G L A P+ LADVV GVT + + + GE ++ K R+YV + FA + D+ A + + A + +F AA+ A+P V V + N K GD+QCN AM +FTALKG+ +P A A++ LPA+P + + SVAG GFIN L PAF+ +A ++R G P P K RVVVDFSSPNIAK+MHVGHLRSTIIGD++CR+ EF GH V R NHVGDWGTQFGMLI ++ E YP + + P++ DLT YKAAK+RFD F + S+ VV LQSGD +VW +LCDISR+EFQ+VYDRLGV+L E GESFYN IP +D + A GL++ DGA V P ++ K DG + Y +TD+AA+ YRL L+ DW++ TD Q HF ++F+ R AG + HR+ H+GFG V E GK+FKTRSGE VRLV+LLDEA RMKAQ+ R+++G+ T E A A ++GYGAVKYFDL+Q PT++Y FS+DRMLST G+TA+YL FA+ARL+SI+RKA VD+AAL E ++ AH E LA ELL DV+ M DL NRLC YLYT++ K FVT CRVL S EQSSRLLLCEAT M KCF+LLG+ L +I Sbjct: 3 LLVSEQRGPEELKCFLALALTGTKFTTGALDAS---AAARGPQLVVADPKAQEDARVFSANAVCRYVAALANALLADDLAVDEWLEWESAVLAPWVRAATTAQDA---PAPEVRAEQLAALLSAKDGDALAAAAPPAFLFGSEVTLADVVAGVTLREALALVPATQGEAPVLA---KYRAYVAQLFAHGEFAKATAAPAAPSVADLSHLDAAQLAGCTQHNVLALIETIFGAAIAAAFPGLDVPPVE---VTRTKNAKFGDYQCNSAMAIFTALKGSPSAAKAPRDVAQAIINALPANPAVHNFSVAGPGFINAFLTPAFVANRLAAVLRHGVQPSPPAKRLRVVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQGHNVDRINHVGDWGTQFGMLICHLTETYPAWATELPDVQDLTKLYKAAKERFDADAGFHQRSKEQVVRLQSGDATARQVWQMLCDISRREFQQVYDRLGVSLREMGESFYNPIIPRVLDMVRAKGLMTDSDGAQCVFTTVHKQPFLLVKSDGSYLYPTTDIAALWYRLHELEADWIVIYTDYTQKDHFDLLFEVGRLAGVLDPAVHRVNHVGFGTVNDESGKRFKTRSGEVVRLVELLDEAKARMKAQLLARIESGQTTLPREQVDAAAEKLGYGAVKYFDLRQSPTSNYIFSFDRMLSTNGDTAVYLMFAYARLSSIVRKAG----VDMAALVAQSEALLRPAHATEVALAQELLQLPDVIAFIMKDLSSNRLCAYLYTVSEKVQTFVTACRVLGSDEQSSRLLLCEATLQVMHKCFTLLGIEPLDQI 793
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Match: A0A6U3TXY6_9STRA (Arginine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TXY6_9STRA) HSP 1 Score: 608 bits (1569), Expect = 1.670e-196 Identity = 349/752 (46.41%), Postives = 476/752 (63.30%), Query Frame = 1 Query: 730 SLIFGPNAICRYFSYKGTATVDSAAVEEWLEWEATALAQTEKAVAHVKKSGGVPPPQVLSPLQY-LEDKLSGQWLVDGAVPSLADVVVGVTAKTIVDSLGEGDAMSAFPKVRSYVQRWSETNAFASGITDVGEFTKTAKATALKAGLHASLLG----LFDAALFRAWPTAKAAGVNS-----SSVVKCSNYKHGDFQCNVAMPLFTALKGTA---GGPASPMAAASAVLTNLPA--SPLIDSTSVAGGGFINIRLRPAFINEGIARIVRDG--PAPPEVKPARVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEFCGHTVLRHNHVGDWGTQFGMLINYMKEAYPNFLQ----DPPNITDLTTFYKAAKKRFDDSDEFKEASRNTVVELQSGDRACTEVWTLLCDISRKEFQKVYDRLGVTLEEYGESFYNDRIPGAIDALAAAGLVS-KDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMAAIRYRLQTLKCDWVIAITDAGQASHFHMIFDTARAAGWVKKH-HRLEHLGFGVVQGEDGKKFKTRSGETVRLVDLLDEAVKRMKAQIQERMDAGKLTTSPESAAAVAAEMGYGAVKYFDLKQDPTTSYKFSYDRMLSTTGNTAIYLQFAHARLASILRKAEEEKKVDLAAL-KTVPETVVVAHDAERGLAFELLMFSDVVEACMADLGLNRLCEYLYTLATKFTDFVTNCRVLDSPEQSSRLLLCEATGVTMRKCFSLLGMTALYRI 2913 ++ FG NAI + + V ++ +EWLE+E L + + KK V L+ L+ L++K + + G+ + ADV + VT I D++ S P V +YV+ ++AF +G +D+ + + AT+ + SLL +F ++ A+P A A S + V KC N K GD+QC AMPLF LK G +P A ++ ++ + +++ +V G GFI R+ +++ + +++ G P P +KP VVDFSSPNIAKEMHVGHLRSTIIG+++CRL EFCG+ V R NHVGDWGTQFGMLI ++KE YP+ D NITDLT FYK AK+RFD+S EFK+ S+ VV+LQSGD+ C +W LLCDISR+EF+KVYDRL +T EE GESFYND+IP I AGL+S ++ GA + + PL+V+K DGGFGYDSTDMAA+++R QT+ +I ITD QA HF M F A+ GWV H+LEH+GFG VQGEDGK+FKTRSG+TVRLVDLLDEAV RM+ ++ER+ GK + + A+ +GYGAVKYFDL+++PTT+Y FSY+ ML T G+TAIYL +AHARL SI K +E+ VD+ L K T+VV H AER L +L MF+D++E+ + DL +CE++Y ++T + FV CRVLDSPE SRLLLC AT + MR+CF LLG+ + RI Sbjct: 115 AVAFGGNAILKSLCLLSSNHVFTSKEDEWLEYERCVLRPAVSS-KNAKKINAV-----LTTLEETLKEKCESVFYLVGSTTTCADVAIVVTLSFIQDAIS-----STTPTVENYVKHHLSSSAFVTGTSDLSKLLPSNDATSFDT-TNPSLLQAVEFVFTQSIRNAFPEALMALGPSILSPDAKVAKCKNAKDGDYQCTSAMPLFQKLKQYGLLPSGCNTPQDVAKYIVKDVEGRGNKIVEDLAVNGPGFILCRITSSYLQTHMNALIQAGSVPRPRGIKPTTCVVDFSSPNIAKEMHVGHLRSTIIGEAVCRLLEFCGNDVKRINHVGDWGTQFGMLIQFLKEEYPDLKGEGDIDQVNITDLTAFYKKAKERFDESPEFKKMSQTNVVKLQSGDKECLGIWQLLCDISRREFKKVYDRLDITTEECGESFYNDKIPAVIQEFDDAGLISIEEGGAKCIFVPKAPIPLMVQKSDGGFGYDSTDMAALKHRTQTVGAKRIICITDYSQADHFKMCFSAAKMIGWVDPSTHKLEHIGFGTVQGEDGKRFKTRSGDTVRLVDLLDEAVNRMEISLKERIGEGKANITLDEVPETASALGYGAVKYFDLRRNPTTNYIFSYNDMLETNGDTAIYLLYAHARLESICTKGKEKHNVDVDELIKANKATIVVGHPAERNLTLQLQMFADMIESTLDDLFPYHVCEFVYNVSTAVSKFVNQCRVLDSPEMESRLLLCRATAIVMRQCFELLGIRPVMRI 854 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig124.1509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig124.1509.1 >prot_H-paniculata_contig124.1509.1 ID=prot_H-paniculata_contig124.1509.1|Name=mRNA_H-paniculata_contig124.1509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=913bp MADELQVEIVALEDKVQQLKASGGATAAVTAEVAKLLEAKNRYKETIGIEback to top mRNA from alignment at H-paniculata_contig124:29040..39554- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig124.1509.1 ID=mRNA_H-paniculata_contig124.1509.1|Name=mRNA_H-paniculata_contig124.1509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10515bp|location=Sequence derived from alignment at H-paniculata_contig124:29040..39554- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig124:29040..39554- >mRNA_H-paniculata_contig124.1509.1 ID=mRNA_H-paniculata_contig124.1509.1|Name=mRNA_H-paniculata_contig124.1509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5478bp|location=Sequence derived from alignment at H-paniculata_contig124:29040..39554- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |