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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 953 |
| Cds size | 708 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12379.1495.1 >prot_H-paniculata_contig12379.1495.1 ID=prot_H-paniculata_contig12379.1495.1|Name=mRNA_H-paniculata_contig12379.1495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MYNRALAFLSNIDHTQPVAFARVDGLNPTASPCTFRKCFSPEQKQNKSDS
AASEGCCSDFTNPCHVTVYPEHPEVNRTYQYKDYGPGGLFWPYGGSGAFV
SAGLAMDVVGGMEGWDRCTHLFNSMNTDVQFAQCIKTHGYSMGSYREGFF
NLETAIPDKIQEALSSDCQVMGVHLGLKHLGNYTTESFGAAISAVRDEDE
AWTGRGDGIKNACPKAWDAISRWQNESESYVMSHS* back to topmRNA from alignment at H-paniculata_contig12379:3718..5944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12379.1495.1 ID=mRNA_H-paniculata_contig12379.1495.1|Name=mRNA_H-paniculata_contig12379.1495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2227bp|location=Sequence derived from alignment at H-paniculata_contig12379:3718..5944+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATACTGTGTTCATGTACAACAGAGCTCTTGCTTTCCTCAGCAATATCGA
CCATACTCAGGTGGCACACCGGTCAACTATTCATCGCCAGACGTGGCGAT
GTTGGGTTCTACGGAGTAGCCTAAATATGAGCGACAGTGGTGGTGTTTTG
TGGTCTGCTGAGCAACAAAACAAAGCATGTTGGCGCTGCCATTGAAAATA
GTGCGTACGACAGACAGTCATCTGAATTGCATCATAGTGTGTACAGCAGT
GAATCTGACGCGATGTACGTGTCGAAGTTTACTCTCCAAGCGGGAAGAAT
TGCATCAGAGCCACTTCAGCGGGAGATATCGCTTGGTTCTTCAATCGGGT
ACGGAATAGATGTACTGCGTTTACGATAGCTTGACGAAACACTGACGGCC
CGAAACGTGCTGATTGCCCTTACGGTATGCCGTGTGCAGCCCGTGGCATT
CGCCAGGGTTGATGGTCTGAATCCAACGGCATCTCCCTGTACGTTCAGGA
AGTGCTTCTCACCAGAGGTGAGCAAGAGTAGGCGTTGCCGCGAAAATGTG
TCTTGATATTCAATCATTTTCTTCTTGGTGTGTCAAGTACCACACCCTCA
TGGTAGGAAAACGTGAGCATGATATAAGATACTTCGCGAGTTACAGGTAC
CCACCTTGCAACACAAAGCACACAACTGTGCTAGCTCGACATCCTGTCTC
ATATGCTGTTCGTTGGTCGTTCTCCCCAACGACAGTCATACCAAGCGCTG
ATACATCACCCTAGCGGCATGGTTCCCTATAAATTTTCATGTTGACAGCT
TTTCATCACCGCTCAATCGCCCTATATACCCCTCAGCAAAAACAAAACAA
GTCGGACTCGGCGGCGTCCGAAGGCTGCTGTTCGGACTTCACCAATCCGT
GCCACGTGACCGTCTATCCGGAGCACCCAGAAGTCAACAGAACCTACCAA
TACAAGGACTATGGTCCCGGGGGGCTTTTTTGGCCTTACGGTGGATCGGG
AGCATTCGTGAGCGCGGGATTGGCGATGGATGTCGTCGGGGGCATGGAGG
GCTGGGATCGATGCACTCACCTGTTTAACAGCATGAACACTGATGTGCAG
GTATATATCGCAACTCTACCATCCAATCCTTAGTTCGTGTATGTGTTCAC
ACAAGTTTATCCTGAGTTAGAATTGCATTCGTGTCTCAAATAAAGCACAC
ATAAATGAAGTTCGTGCTTCTACGCCATACGTATCTGCCGAAGTGTACAT
TCAGTTAAAATGAGTAACATCATCCTGATCGACACAGAGCTGGACCTCTG
GTTCAGGGGGTACTGTGCATGCGATGTCAACAGAGAATATCATCGATGCT
CCTGTTTCGCCGCTCTAAAACTTAACCACAGTTCGCGCAATGCATCAAGA
CACATGGATACTCGATGGGAAGCTACCGCGAGGGATTTTTCAACCTGGAA
ACAGCAATTCCCGACAAGATTCAAGAAGCTCTGTCCTCAGATTGTCAGGT
GCGCGGCCACCGGCCTGCATGCCCCCAAGTTTTATCCGTTCTAGAGGACA
AGAGATCTAGTTTGAGAGAAGCTTGTCCTTCACGGCACTTGTCGAAAGAA
AACGTTTAGCGTTTCCACCTTTTCTCTGCGGTTTAGAAGTAGTAGTTAGA
TACTCATGGTCACCACTTACCAGTTCAACAGATCACCTTCCTTGGGATAA
ATCTATTTCCGACAAGTAAAGCTTTGTGCTTGGTAGTCCGGAGAACCTAG
GCGCACGTGTTTCTTGTCACTGAACGAATATGCCCGCAAGCAGGTAATGG
GGGTACACCTTGGGCTGAAGCATTTGGGAAACTACACGACTGAATCATTC
GGAGCTGCTATATCCGCGGTTCGAGACGAAGATGAGGCCTGGACAGGGCG
TGGAGATGGGATCAAAAATGCGTGCCCGAAGGCATGGGATGCCATCTCGC
GATGGCAAAACGAGAGCGAGAGCTATGTTATGTCGCACTCGTGATACCGG
ACACTGCAGTGGCTTTAGATGGCTATAAACTGCGGCTTGCGCATAGAATT
TATCCATGCGTACTCCACATTTTGCGAATGTTGTGTTCATTATTGCGTGT
CGGTTCTTGTTGATCGAGTGAGTGACCATCATTCCCTGGTGCCAATATAT
GGATCATTCATAGCGACTGATTATGAACTTTTAGATCGATGAACATACAT
CCATATCGAATATGTAATGACTCGTAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig12379:3718..5944+ >mRNA_H-paniculata_contig12379.1495.1 ID=mRNA_H-paniculata_contig12379.1495.1|Name=mRNA_H-paniculata_contig12379.1495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at H-paniculata_contig12379:3718..5944+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACAACAGAGCTCTTGCTTTCCTCAGCAATATCGACCATACTCAGAT
GTACAACAGAGCTCTTGCTTTCCTCAGCAATATCGACCATACTCAGCCCG
TGGCATTCGCCAGGGTTGATGGTCTGAATCCAACGGCATCTCCCTGTACG
TTCAGGAAGTGCTTCTCACCAGAGCCCGTGGCATTCGCCAGGGTTGATGG
TCTGAATCCAACGGCATCTCCCTGTACGTTCAGGAAGTGCTTCTCACCAG
AGCAAAAACAAAACAAGTCGGACTCGGCGGCGTCCGAAGGCTGCTGTTCG
GACTTCACCAATCCGTGCCACGTGACCGTCTATCCGGAGCACCCAGAAGT
CAACAGAACCTACCAATACAAGGACTATGGTCCCGGGGGGCTTTTTTGGC
CTTACGGTGGATCGGGAGCATTCGTGAGCGCGGGATTGGCGATGGATGTC
GTCGGGGGCATGGAGGGCTGGGATCGATGCACTCACCTGTTTAACAGCAT
GAACACTGATGTGCAGCAAAAACAAAACAAGTCGGACTCGGCGGCGTCCG
AAGGCTGCTGTTCGGACTTCACCAATCCGTGCCACGTGACCGTCTATCCG
GAGCACCCAGAAGTCAACAGAACCTACCAATACAAGGACTATGGTCCCGG
GGGGCTTTTTTGGCCTTACGGTGGATCGGGAGCATTCGTGAGCGCGGGAT
TGGCGATGGATGTCGTCGGGGGCATGGAGGGCTGGGATCGATGCACTCAC
CTGTTTAACAGCATGAACACTGATGTGCAGTTCGCGCAATGCATCAAGAC
ACATGGATACTCGATGGGAAGCTACCGCGAGGGATTTTTCAACCTGGAAA
CAGCAATTCCCGACAAGATTCAAGAAGCTCTGTCCTCAGATTGTCAGTTC
GCGCAATGCATCAAGACACATGGATACTCGATGGGAAGCTACCGCGAGGG
ATTTTTCAACCTGGAAACAGCAATTCCCGACAAGATTCAAGAAGCTCTGT
CCTCAGATTGTCAGGTAATGGGGGTACACCTTGGGCTGAAGCATTTGGGA
AACTACACGACTGAATCATTCGGAGCTGCTATATCCGCGGTTCGAGACGA
AGATGAGGCCTGGACAGGGCGTGGAGATGGGATCAAAAATGCGTGCCCGA
AGGCATGGGATGCCATCTCGCGATGGCAAAACGAGAGCGAGAGCTATGTT
ATGTCGCACTCGTGAGTAATGGGGGTACACCTTGGGCTGAAGCATTTGGG
AAACTACACGACTGAATCATTCGGAGCTGCTATATCCGCGGTTCGAGACG
AAGATGAGGCCTGGACAGGGCGTGGAGATGGGATCAAAAATGCGTGCCCG
AAGGCATGGGATGCCATCTCGCGATGGCAAAACGAGAGCGAGAGCTATGT
TATGTCGCACTCGTGA back to top
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