prot_H-paniculata_contig6985.14928.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6985.14928.1
Unique Nameprot_H-paniculata_contig6985.14928.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A6P6AH64_DURZI (uncharacterized protein LOC111309412 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AH64_DURZI)

HSP 1 Score: 94.4 bits (233), Expect = 1.130e-20
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    5 EISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGT 86
            +++A+YTPQQNGV ER  R++ EM R  +   N+ +++W EA + +VY LNR  T+   G TP+E WYG+ P + HLRVFG+
Sbjct:  264 QLTATYTPQQNGVNERKNRTIMEMARCMLFEKNLSKKFWAEAVNTSVYLLNRLPTKALKGNTPFEAWYGSKPSVHHLRVFGS 345          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA)

HSP 1 Score: 93.6 bits (231), Expect = 2.610e-20
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFG 85
            K + +ASY+PQQNGVAER  RS+ EM R  +  A + ++YW EA + AVY  N + T+P N  TPYE W+G  PK++HLR+FG
Sbjct:  125 KPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFG 206          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: W8APZ4_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8APZ4_CERCA)

HSP 1 Score: 91.7 bits (226), Expect = 1.230e-19
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGTR 87
            +++++A YTPQQNGVAER+ R++ EM RS ++ A M  R+W EA   AVY  NR+ T+     TPYE+W+G  P + H R FG++
Sbjct:  547 RRQLTAPYTPQQNGVAERANRTLVEMARSMLVHAKMNERFWAEAVKTAVYIRNRSATKSLVNTTPYEEWHGIKPTVAHFRTFGSK 631          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: W8AL23_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Ceratitis capitata TaxID=7213 RepID=W8AL23_CERCA)

HSP 1 Score: 91.7 bits (226), Expect = 1.250e-19
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGTR 87
            +++++A YTPQQNGVAER+ R++ EM RS ++ A M  R+W EA   AVY  NR+ T+     TPYE+W+G  P + H R FG++
Sbjct:  547 RRQLTAPYTPQQNGVAERANRTLVEMARSMLVHAKMNERFWAEAVKTAVYIRNRSATKSLVNTTPYEEWHGIKPTVAHFRTFGSK 631          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A1J3ETN2_NOCCA (Copia protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ETN2_NOCCA)

HSP 1 Score: 84.3 bits (207), Expect = 1.770e-19
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFG 85
            +++++A+Y+PQQNGV+ER  RS+ EM R+ +   ++  ++W EA H A Y  NR  TR     TP E W GT P L+HL+VFG
Sbjct:    1 ERQLTATYSPQQNGVSERRNRSLVEMARAMIKAKDLPLKFWAEAVHTAAYIQNRIPTRALENKTPLEAWNGTKPSLNHLKVFG 83          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: UPI001CC6DD69 (uncharacterized protein LOC110630572 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC6DD69)

HSP 1 Score: 89.7 bits (221), Expect = 5.980e-19
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFG 85
            +++++ASYTPQQNGVAER  RS+ EM +S +   N+ + +W EA H A Y LNR+ T   +  TP+E W G  PK+ H ++FG
Sbjct:  700 QRQLTASYTPQQNGVAERKIRSLVEMAKSMLKAKNLPKSFWAEAIHTAAYILNRSSTSALSNQTPFEAWNGWKPKVKHFKIFG 782          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 89.4 bits (220), Expect = 8.140e-19
Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGT 86
            K++++A+YTPQQNGVAER  RSV  MTR  ++  ++ R++W EA   AVY LNR+ ++  N  TP EKW    P ++HLR+FG+
Sbjct:  585 KRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGS 668          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A6P5RP40_PRUAV (Non-specific serine/threonine protein kinase n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5RP40_PRUAV)

HSP 1 Score: 89.4 bits (220), Expect = 8.250e-19
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFG 85
            K +++A YTPQ+NGVAER  R++ +M R  +   N+ + +W EA   AVY LNRA +R  NG  PYE W G  P + HLRVFG
Sbjct: 1682 KHQLTARYTPQENGVAERKNRTIMDMVRCMLKLKNLPKCFWAEAVACAVYILNRAPSRSVNGRIPYEVWSGRKPNIQHLRVFG 1764          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A251RQU6_HELAN (Putative ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RQU6_HELAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.370e-18
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGT 86
            + +++ S+TPQQNGVAER  R++ E++RS M    +   YW EA   A Y LNR +T+     TPYE W G  P +DHLRVFG+
Sbjct:    5 RHQLTNSFTPQQNGVAERKNRTLMELSRSMMNVKQLPNCYWAEAIACATYILNRTITKTRPNQTPYEAWNGRKPNVDHLRVFGS 88          
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Match: A0A2S2NXV8_SCHGA (Retrovirus-related Pol polyprotein n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NXV8_SCHGA)

HSP 1 Score: 88.6 bits (218), Expect = 1.500e-18
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    3 KQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAAVYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGT 86
            K E S  YTPQQNG AERS R++ E  R+ + + N+ +  W EA +  VY +NR       G TPYE W+  TP ++HL++FGT
Sbjct:  275 KHETSVPYTPQQNGKAERSMRTIVEAARTMLYSKNLSKTLWAEAVNTVVYTINRTGNTGQEGKTPYELWFNKTPDINHLKIFGT 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6985.14928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P6AH64_DURZI1.130e-2047.56uncharacterized protein LOC111309412 n=1 Tax=Durio... [more]
A0A2M4CK12_ANODA2.610e-2051.81Putative pol polyprotein (Fragment) n=1 Tax=Anophe... [more]
W8APZ4_CERCA1.230e-1947.06Retrovirus-related Pol polyprotein from transposon... [more]
W8AL23_CERCA1.250e-1947.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3ETN2_NOCCA1.770e-1945.78Copia protein (Fragment) n=1 Tax=Noccaea caerulesc... [more]
UPI001CC6DD695.980e-1946.99uncharacterized protein LOC110630572 n=1 Tax=Manih... [more]
Q9C7Y1_ARATH8.140e-1948.81Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
A0A6P5RP40_PRUAV8.250e-1949.40Non-specific serine/threonine protein kinase n=1 T... [more]
A0A251RQU6_HELAN1.370e-1847.62Putative ribonuclease H-like domain, Reverse trans... [more]
A0A2S2NXV8_SCHGA1.500e-1845.24Retrovirus-related Pol polyprotein n=1 Tax=Schizap... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..87
e-value: 1.6E-12
score: 49.0
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 8..87
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..87
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..75
score: 9.05
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6985contigH-paniculata_contig6985:8354..8623 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6985.14928.1mRNA_H-paniculata_contig6985.14928.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6985 8354..8696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6985.14928.1 ID=prot_H-paniculata_contig6985.14928.1|Name=mRNA_H-paniculata_contig6985.14928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MAKQEISASYTPQQNGVAERSWRSVFEMTRSKMITANMGRRYWVEAAHAA
VYCLNRALTRPHNGGTPYEKWYGTTPKLDHLRVFGTRRT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf