mRNA_H-paniculata_contig69818.14924.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig69818.14924.1
Unique NamemRNA_H-paniculata_contig69818.14924.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: W7TZP3_9STRA (Anthranilate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZP3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.210e-17
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPA+LRKDF+V +YQ+LEARAHGADTVLLIVAILEVDRL  LI A R   MEPLVEV
Sbjct:  197 RPAVLRKDFVVADYQILEARAHGADTVLLIVAILEVDRLVRLIRACRAWGMEPLVEV 253
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A485KLZ7_9STRA (Aste57867_9020 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLZ7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.240e-17
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:    1 RRPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            +RPA+LRKDFI D YQ+LEARAHGAD++LLIVAIL +D L SL+ ASR L MEPLVEV
Sbjct:  126 KRPAVLRKDFIFDTYQILEARAHGADSLLLIVAILTLDELKSLMQASRDLGMEPLVEV 183
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A024ULY2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024ULY2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.070e-16
Identity = 42/58 (72.41%), Postives = 51/58 (87.93%), Query Frame = 1 
Query:    1 RRPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RRPA+LRKDFI D YQ+LEARA+GAD++LLIVAIL +D L +L+ ASR+L MEPLVEV
Sbjct:  127 RRPAVLRKDFIFDTYQVLEARAYGADSLLLIVAILTLDELTTLLTASRELGMEPLVEV 184
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: UPI0004408E24 (IGPS-domain-containing protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004408E24)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-16
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPA+LRKDFIVDEYQ+ EAR HGADT+LLIVA+L + RL +L   SR+L MEPLVEV
Sbjct:  367 RPAVLRKDFIVDEYQIAEARLHGADTILLIVALLPIHRLKALYTHSRRLGMEPLVEV 423
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A5D6XGZ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGZ5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.450e-16
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPAILRKDFI+DEYQLLEARA+GAD VLLIVAIL  +RL  LI+A+ KL M PLVEV
Sbjct:   99 RPAILRKDFIIDEYQLLEARAYGADCVLLIVAILTPERLAELIEATHKLGMCPLVEV 155
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A6U0SXI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0SXI8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.000e-16
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPAILRKDFI DEYQLLEARA+GADTVLLIVAIL   +L  LI++ R L MEPLVEV
Sbjct:  162 RPAILRKDFIFDEYQLLEARAYGADTVLLIVAILGRQQLKDLIESCRSLGMEPLVEV 218
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A067MJB7_9AGAM (Multifunctional tryptophan biosynthesis protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MJB7_9AGAM)

HSP 1 Score: 80.5 bits (197), Expect = 2.740e-16
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPAILRKDFIVDEYQ+ EAR HGADTVLLIVAIL  DRL +L + +  L MEPLVEV
Sbjct:  259 RPAILRKDFIVDEYQIAEARLHGADTVLLIVAILSRDRLRALYEYATSLGMEPLVEV 315
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: G4TB02_SERID (Multifunctional tryptophan biosynthesis protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TB02_SERID)

HSP 1 Score: 80.5 bits (197), Expect = 2.740e-16
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPAILRKDFI+DEYQ++EAR +GADTVLLIVA+L V RL SL+  SR L MEPLVEV
Sbjct:  348 RPAILRKDFILDEYQIMEARIYGADTVLLIVAMLPVARLASLMKFSRSLGMEPLVEV 404
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: UPI0019059CC8 (indole-3-glycerol phosphate synthase-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019059CC8)

HSP 1 Score: 80.5 bits (197), Expect = 2.750e-16
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 1 
Query:    4 RPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RPAILRKDFI+DEYQ+ EAR HGADTVLLIVA+L V+RL+SL   S  L MEPLVEV
Sbjct:  371 RPAILRKDFILDEYQISEARLHGADTVLLIVAMLSVERLESLYAFSVSLGMEPLVEV 427
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BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Match: A0A6A4Z2J5_9STRA (IGPS domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2J5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.670e-16
Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:    1 RRPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKLEMEPLVEV 174
            RRPA+LRKDFI D YQ+LEARA+GAD++LLIVAIL +  L +L+ ASR+L MEPLVEV
Sbjct:    2 RRPAVLRKDFIFDTYQVLEARAYGADSLLLIVAILTLKELTALLAASRELGMEPLVEV 59
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig69818.14924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TZP3_9STRA1.210e-1778.95Anthranilate synthase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A485KLZ7_9STRA2.240e-1774.14Aste57867_9020 protein n=2 Tax=Aphanomyces stellat... [more]
A0A024ULY2_9STRA1.070e-1672.41Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
UPI0004408E241.080e-1671.93IGPS-domain-containing protein n=1 Tax=Fomitiporia... [more]
A0A5D6XGZ5_9STRA1.450e-1677.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6U0SXI8_9STRA2.000e-1677.19Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A067MJB7_9AGAM2.740e-1675.44Multifunctional tryptophan biosynthesis protein n=... [more]
G4TB02_SERID2.740e-1675.44Multifunctional tryptophan biosynthesis protein n=... [more]
UPI0019059CC82.750e-1675.44indole-3-glycerol phosphate synthase-domain-contai... [more]
A0A6A4Z2J5_9STRA3.670e-1670.69IGPS domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig69818contigH-paniculata_contig69818:174..347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.4
Seed ortholog evalue7.5e-14
Seed eggNOG ortholog157072.XP_008864708.1
Preferred nameTRP1
KEGG rclassRC00010,RC00944,RC00945,RC02148,RC02414
KEGG koko:K01656,ko:K01817,ko:K13501
KEGG ReactionR00985,R00986,R03508,R03509
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00023
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0004425,GO:0004640,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016832,GO:0016833,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0033984,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
EggNOG free text desc.phosphoribosylanthranilate isomerase activity
EggNOG OGsCOG0134@1,COG0135@1,KOG4201@2759,KOG4202@2759
EC4.1.1.48,4.1.3.27,5.3.1.24
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size174
Cds size174
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930839.5817082-CDS-H-paniculata_contig69818:173..3471622930839.5817082-CDS-H-paniculata_contig69818:173..347Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig69818 174..347 +
1691481475.810896-CDS-H-paniculata_contig69818:173..3471691481475.810896-CDS-H-paniculata_contig69818:173..347Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig69818 174..347 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig69818.14924.1prot_H-paniculata_contig69818.14924.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig69818 174..347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig69818.14924.1

>prot_H-paniculata_contig69818.14924.1 ID=prot_H-paniculata_contig69818.14924.1|Name=mRNA_H-paniculata_contig69818.14924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
RRPAILRKDFIVDEYQLLEARAHGADTVLLIVAILEVDRLDSLIDASRKL
EMEPLVEV
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mRNA from alignment at H-paniculata_contig69818:174..347+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig69818.14924.1 ID=mRNA_H-paniculata_contig69818.14924.1|Name=mRNA_H-paniculata_contig69818.14924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=174bp|location=Sequence derived from alignment at H-paniculata_contig69818:174..347+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCAGACCCGCTATTCTTCGTAAAGATTTTATCGTGGACGAGTACCAGCT
GCTGGAGGCTAGAGCCCATGGGGCGGATACTGTTCTTCTTATCGTGGCCA
TCCTCGAGGTGGACCGGCTGGACAGCCTTATCGACGCTTCCAGGAAGTTA
GAAATGGAACCCTTGGTCGAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig69818:174..347+

>mRNA_H-paniculata_contig69818.14924.1 ID=mRNA_H-paniculata_contig69818.14924.1|Name=mRNA_H-paniculata_contig69818.14924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig69818:174..347+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCAGACCCGCTATTCTTCGTAAAGATTTTATCGTGGACGAGTACCAGCT
GCTGGAGGCTAGAGCCCATGGGGCGGATACTGTTCTTCTTATCGTGGCCA
TCCTCGAGGTGGACCGGCTGGACAGCCTTATCGACGCTTCCAGGAAGTTA
GAAATGGAACCCTTGGTCGAGGTGCGCAGACCCGCTATTCTTCGTAAAGA
TTTTATCGTGGACGAGTACCAGCTGCTGGAGGCTAGAGCCCATGGGGCGG
ATACTGTTCTTCTTATCGTGGCCATCCTCGAGGTGGACCGGCTGGACAGC
CTTATCGACGCTTCCAGGAAGTTAGAAATGGAACCCTTGGTCGAGGTG
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